MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 71831 bp
Accession: NZ_CP091123 Location: 1939269..2011099 Organism: Serratia marcescens strain CM2017_569 Replicon: chromosome
Accession: NZ_CP091123 Location: 1939269..2011099 Organism: Serratia marcescens strain CM2017_569 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2D48_RS09195 (L2D48_09195) | 1934580..1935767 | - | 1188 | WP_240296299.1 | multidrug efflux RND transporter periplasmic adaptor subunit SdeA | - |
| L2D48_RS09200 (L2D48_09200) | 1936063..1936419 | + | 357 | WP_004928813.1 | helix-turn-helix domain-containing protein | - |
| L2D48_RS09205 (L2D48_09205) | 1936489..1937184 | - | 696 | WP_139145181.1 | hypothetical protein | - |
| L2D48_RS09230 (L2D48_09230) | 1938753..1940219 | + | 1467 | WP_049194085.1 | peptide MFS transporter | - |
| L2D48_RS09235 (L2D48_09235) | 1940346..1941287 | + | 942 | WP_038875857.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| L2D48_RS09240 (L2D48_09240) | 1941617..1943551 | + | 1935 | WP_071605348.1 | right-handed parallel beta-helix repeat-containing protein | - |
| L2D48_RS09245 (L2D48_09245) | 1943802..1943942 | + | 141 | Protein_1783 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| L2D48_RS09250 (L2D48_09250) | 1944033..1944770 | + | 738 | WP_038875855.1 | phosphatase | - |
| L2D48_RS09255 (L2D48_09255) | 1944813..1945391 | + | 579 | WP_038875853.1 | molecular chaperone | - |
| L2D48_RS09260 (L2D48_09260) | 1945550..1946203 | + | 654 | WP_038875883.1 | DUF533 domain-containing protein | - |
| L2D48_RS09265 (L2D48_09265) | 1946272..1948305 | + | 2034 | WP_047727774.1 | prolyl oligopeptidase family serine peptidase | - |
| L2D48_RS09270 (L2D48_09270) | 1948341..1949009 | - | 669 | WP_004928833.1 | exodeoxyribonuclease X | - |
| L2D48_RS09275 (L2D48_09275) | 1949036..1949782 | - | 747 | WP_038875851.1 | carbon-nitrogen hydrolase family protein | - |
| L2D48_RS09280 (L2D48_09280) | 1950152..1950577 | + | 426 | WP_038875849.1 | RNA polymerase-binding protein DksA | - |
| L2D48_RS09285 (L2D48_09285) | 1950772..1951725 | + | 954 | WP_038875880.1 | prolyl aminopeptidase | - |
| L2D48_RS09290 (L2D48_09290) | 1951935..1953134 | + | 1200 | WP_001062689.1 | site-specific integrase | - |
| L2D48_RS09295 (L2D48_09295) | 1953131..1954195 | + | 1065 | WP_003092331.1 | PDDEXK nuclease domain-containing protein | - |
| L2D48_RS09300 (L2D48_09300) | 1954547..1955056 | + | 510 | WP_003092330.1 | DNA repair protein RadC | - |
| L2D48_RS09305 (L2D48_09305) | 1955123..1957579 | - | 2457 | WP_225988656.1 | AAA family ATPase | - |
| L2D48_RS09310 (L2D48_09310) | 1957972..1958799 | + | 828 | WP_003092327.1 | DUF932 domain-containing protein | - |
| L2D48_RS09315 (L2D48_09315) | 1958880..1960949 | + | 2070 | WP_000994919.1 | ParB/RepB/Spo0J family partition protein | - |
| L2D48_RS09320 (L2D48_09320) | 1961011..1961220 | + | 210 | WP_022580212.1 | hypothetical protein | - |
| L2D48_RS09325 (L2D48_09325) | 1961996..1962310 | + | 315 | WP_001273857.1 | DUF736 domain-containing protein | - |
| L2D48_RS09330 (L2D48_09330) | 1962623..1962916 | - | 294 | WP_006379425.1 | helix-turn-helix transcriptional regulator | - |
| L2D48_RS09335 (L2D48_09335) | 1963204..1963551 | + | 348 | WP_016487838.1 | DUF2958 domain-containing protein | - |
| L2D48_RS09340 (L2D48_09340) | 1963894..1964664 | + | 771 | WP_003092318.1 | DUF2285 domain-containing protein | - |
| L2D48_RS09345 (L2D48_09345) | 1964776..1965060 | + | 285 | WP_001247107.1 | helix-turn-helix domain-containing protein | - |
| L2D48_RS09350 (L2D48_09350) | 1965087..1965932 | + | 846 | WP_022652188.1 | replication initiator protein A | - |
| L2D48_RS09355 (L2D48_09355) | 1966174..1966812 | + | 639 | WP_003092312.1 | ParA family partition ATPase | - |
| L2D48_RS09360 (L2D48_09360) | 1966809..1967072 | + | 264 | WP_000147048.1 | hypothetical protein | - |
| L2D48_RS09365 (L2D48_09365) | 1967069..1967626 | + | 558 | WP_023093372.1 | DUF2840 domain-containing protein | - |
| L2D48_RS09370 (L2D48_09370) | 1967623..1968210 | + | 588 | WP_003092304.1 | S26 family signal peptidase | - |
| L2D48_RS09375 (L2D48_09375) | 1968659..1970662 | + | 2004 | WP_000132148.1 | relaxase/mobilization nuclease and DUF3363 domain-containing protein | - |
| L2D48_RS09380 (L2D48_09380) | 1970729..1971328 | - | 600 | WP_003124411.1 | ABC-type transport auxiliary lipoprotein family protein | - |
| L2D48_RS09385 (L2D48_09385) | 1971421..1972350 | - | 930 | WP_000433686.1 | MlaD family protein | - |
| L2D48_RS09390 (L2D48_09390) | 1972442..1973263 | - | 822 | WP_016487832.1 | ATP-binding cassette domain-containing protein | - |
| L2D48_RS09395 (L2D48_09395) | 1973260..1974417 | - | 1158 | WP_016487831.1 | ABC transporter permease | - |
| L2D48_RS09400 (L2D48_09400) | 1974414..1975034 | - | 621 | WP_128345597.1 | DUF3313 family protein | - |
| L2D48_RS09405 (L2D48_09405) | 1975050..1975397 | - | 348 | WP_038421338.1 | SMR family transporter | - |
| L2D48_RS09410 (L2D48_09410) | 1975478..1978582 | - | 3105 | WP_240296300.1 | efflux RND transporter permease subunit | - |
| L2D48_RS09415 (L2D48_09415) | 1978607..1978906 | - | 300 | WP_235207683.1 | hypothetical protein | - |
| L2D48_RS09420 (L2D48_09420) | 1979035..1980015 | + | 981 | WP_000019473.1 | IS5-like element ISKpn26 family transposase | - |
| L2D48_RS09425 (L2D48_09425) | 1980116..1980949 | - | 834 | WP_240296384.1 | efflux RND transporter periplasmic adaptor subunit | - |
| L2D48_RS09430 (L2D48_09430) | 1980970..1981611 | - | 642 | WP_240296301.1 | TetR family transcriptional regulator | - |
| L2D48_RS09435 (L2D48_09435) | 1981712..1983115 | + | 1404 | WP_000078291.1 | TolC family protein | - |
| L2D48_RS09440 (L2D48_09440) | 1983209..1984114 | + | 906 | WP_000405670.1 | LysR family transcriptional regulator | - |
| L2D48_RS09445 (L2D48_09445) | 1984147..1984410 | + | 264 | WP_000717310.1 | EexN family lipoprotein | - |
| L2D48_RS09450 (L2D48_09450) | 1984469..1984786 | + | 318 | WP_000539741.1 | multidrug efflux SMR transporter | - |
| L2D48_RS09455 (L2D48_09455) | 1985015..1985194 | - | 180 | Protein_1825 | integrase core domain-containing protein | - |
| L2D48_RS09460 (L2D48_09460) | 1985296..1985826 | - | 531 | WP_000043569.1 | hypothetical protein | - |
| L2D48_RS09465 (L2D48_09465) | 1986108..1987013 | - | 906 | WP_023093368.1 | LysR family transcriptional regulator | - |
| L2D48_RS09470 (L2D48_09470) | 1987319..1989316 | + | 1998 | WP_001163195.1 | IncP-type conjugal transfer protein TraG | - |
| L2D48_RS09475 (L2D48_09475) | 1989313..1989789 | + | 477 | WP_000085131.1 | ribbon-helix-helix protein, CopG family | - |
| L2D48_RS09480 (L2D48_09480) | 1989786..1990856 | + | 1071 | WP_023093367.1 | P-type conjugative transfer ATPase TrbB | - |
| L2D48_RS09485 (L2D48_09485) | 1990853..1991239 | + | 387 | WP_000150010.1 | TrbC/VirB2 family protein | - |
| L2D48_RS09490 (L2D48_09490) | 1991236..1991505 | + | 270 | WP_003092280.1 | VirB3 family type IV secretion system protein | - |
| L2D48_RS09495 (L2D48_09495) | 1991518..1993968 | + | 2451 | WP_000933135.1 | conjugal transfer protein TrbE | - |
| L2D48_RS09500 (L2D48_09500) | 1993965..1994708 | + | 744 | WP_003092277.1 | P-type conjugative transfer protein TrbJ | - |
| L2D48_RS09505 (L2D48_09505) | 1994721..1995047 | + | 327 | WP_014603538.1 | hypothetical protein | - |
| L2D48_RS09510 (L2D48_09510) | 1995044..1996411 | + | 1368 | WP_001000746.1 | P-type conjugative transfer protein TrbL | - |
| L2D48_RS09515 (L2D48_09515) | 1996430..1997134 | + | 705 | WP_001211312.1 | conjugal transfer protein TrbF | - |
| L2D48_RS09520 (L2D48_09520) | 1997131..1998123 | + | 993 | WP_000776560.1 | P-type conjugative transfer protein TrbG | - |
| L2D48_RS09525 (L2D48_09525) | 1998126..1999406 | + | 1281 | WP_003092274.1 | TrbI/VirB10 family protein | - |
| L2D48_RS09530 (L2D48_09530) | 1999403..1999648 | + | 246 | WP_000108283.1 | DUF2274 domain-containing protein | - |
| L2D48_RS09535 (L2D48_09535) | 1999944..2000174 | - | 231 | WP_033638067.1 | DNA polymerase III subunit theta | - |
| L2D48_RS09540 (L2D48_09540) | 2000515..2001033 | + | 519 | WP_038875847.1 | non-heme ferritin | - |
| L2D48_RS09545 (L2D48_09545) | 2001327..2001743 | + | 417 | WP_047727770.1 | CopC domain-containing protein YobA | - |
| L2D48_RS09550 (L2D48_09550) | 2001746..2002627 | + | 882 | WP_038875842.1 | copper homeostasis membrane protein CopD | - |
| L2D48_RS09555 (L2D48_09555) | 2002697..2003038 | + | 342 | WP_025302452.1 | YebY family protein | - |
| - | 2003136..2003276 | - | 141 | - | - | Antitoxin Detail |
| - | 2003180..2003276 | + | 97 | - | - | Toxin Detail |
| L2D48_RS09560 (L2D48_09560) | 2003355..2003549 | - | 195 | WP_230122566.1 | tyrosine-type recombinase/integrase | - |
| L2D48_RS09565 (L2D48_09565) | 2003985..2004083 | + | 99 | WP_230122671.1 | DUF1367 family protein | - |
| L2D48_RS09570 (L2D48_09570) | 2004331..2005140 | - | 810 | WP_139145117.1 | hypothetical protein | - |
| L2D48_RS09575 (L2D48_09575) | 2006373..2006702 | - | 330 | WP_038875697.1 | DUF1493 family protein | - |
| L2D48_RS09580 (L2D48_09580) | 2006696..2007154 | - | 459 | WP_048233442.1 | hypothetical protein | - |
| L2D48_RS09585 (L2D48_09585) | 2007558..2007872 | - | 315 | WP_181421323.1 | hypothetical protein | - |
| L2D48_RS09590 (L2D48_09590) | 2008527..2008877 | + | 351 | WP_033638116.1 | DUF4377 domain-containing protein | - |
| L2D48_RS09595 (L2D48_09595) | 2008928..2009305 | - | 378 | WP_240296302.1 | hypothetical protein | - |
| L2D48_RS09600 (L2D48_09600) | 2009516..2010715 | + | 1200 | WP_055312137.1 | trans-2-enoyl-CoA reductase family protein | - |
| L2D48_RS09605 (L2D48_09605) | 2010874..2011437 | + | 564 | WP_033642723.1 | DUF2975 domain-containing protein | - |
| L2D48_RS09610 (L2D48_09610) | 2011412..2011660 | + | 249 | WP_165698098.1 | helix-turn-helix transcriptional regulator | - |
| L2D48_RS09615 (L2D48_09615) | 2012298..2012597 | + | 300 | WP_038875685.1 | hypothetical protein | - |
| L2D48_RS09620 (L2D48_09620) | 2012659..2013084 | + | 426 | WP_053056817.1 | hypothetical protein | - |
| L2D48_RS09625 (L2D48_09625) | 2013118..2013453 | + | 336 | WP_110611438.1 | hypothetical protein | - |
| L2D48_RS09630 (L2D48_09630) | 2013491..2014210 | - | 720 | WP_240296303.1 | two-component system response regulator DcuR | - |
| L2D48_RS09635 (L2D48_09635) | 2014203..2015816 | - | 1614 | WP_038875676.1 | sensor histidine kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|