MGE detailed information
MGE type: Conjugative plasmid MGE length: 63171 bp
Accession: NZ_CP091045 Location: 1..63171 Organism: Escherichia coli strain STEC346 Replicon: plasmid p1_STEC346
Accession: NZ_CP091045 Location: 1..63171 Organism: Escherichia coli strain STEC346 Replicon: plasmid p1_STEC346
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1P11_RS25300 (1) | 1..1104 | + | 1104 | WP_265326872.1 | Multifunctional conjugation protein TraI | Relaxase |
| L1P11_RS25305 (1124) | 1124..1867 | + | 744 | WP_235412043.1 | conjugal transfer pilus acetylase TraX | - |
| L1P11_RS25310 (1922) | 1922..2481 | + | 560 | Protein_2 | fertility inhibition protein FinO | - |
| L1P11_RS25315 (2612) | 2612..2824 | + | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| L1P11_RS25320 (3111) | 3111..3788 | + | 678 | WP_000392235.1 | PIN domain-containing protein | - |
| L1P11_RS25325 (4442) | 4442..4633 | + | 192 | WP_071849536.1 | hypothetical protein | - |
| L1P11_RS25330 (4878) | 4878..5339 | + | 462 | WP_069723215.1 | thermonuclease family protein | - |
| L1P11_RS25335 (5385) | 5385..5594 | + | 210 | WP_171935555.1 | hemolysin expression modulator Hha | - |
| L1P11_RS25340 (5632) | 5632..6222 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| L1P11_RS25345 (6462) | 6462..6722 | + | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| L1P11_RS25350 (6957) | 6957..7031 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| L1P11_RS25355 (7024) | 7024..7881 | + | 858 | WP_123005415.1 | incFII family plasmid replication initiator RepA | - |
| L1P11_RS25360 (8743) | 8743..8901 | + | 159 | WP_235412045.1 | hypothetical protein | - |
| L1P11_RS25365 (8956) | 8956..9225 | + | 270 | WP_071940833.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| L1P11_RS25370 (9225) | 9225..9503 | + | 279 | WP_247173439.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| L1P11_RS25375 (9610) | 9610..10773 | + | 1164 | WP_140431710.1 | hypothetical protein | - |
| L1P11_RS25380 (11038) | 11038..11397 | - | 360 | WP_001559870.1 | YcgJ family protein | - |
| L1P11_RS25385 (11497) | 11497..11691 | - | 195 | WP_235412047.1 | hypothetical protein | - |
| L1P11_RS25390 (12331) | 12331..12510 | - | 180 | WP_001559872.1 | hypothetical protein | - |
| L1P11_RS25395 (12851) | 12851..13831 | + | 981 | WP_001559873.1 | plasmid segregation protein ParM | - |
| L1P11_RS25400 (13834) | 13834..14256 | + | 423 | WP_000774832.1 | plasmid partitioning/stability family protein | - |
| L1P11_RS25405 (14280) | 14280..14570 | + | 291 | WP_235412066.1 | hypothetical protein | - |
| L1P11_RS25410 (14680) | 14680..15582 | + | 903 | WP_077630349.1 | DUF1281 domain-containing protein | - |
| L1P11_RS25415 (15586) | 15586..15890 | + | 305 | Protein_23 | hypothetical protein | - |
| L1P11_RS25420 (15966) | 15966..16649 | + | 684 | WP_000085940.1 | DNA methylase | - |
| L1P11_RS25425 (16650) | 16650..16871 | + | 222 | WP_001558391.1 | hypothetical protein | - |
| L1P11_RS25430 (16852) | 16852..17319 | + | 468 | WP_235412050.1 | DUF1380 family protein | - |
| L1P11_RS25435 (17364) | 17364..18134 | + | 771 | WP_159380989.1 | hypothetical protein | - |
| L1P11_RS25440 (18549) | 18549..18974 | + | 426 | WP_021548776.1 | antirestriction protein | - |
| L1P11_RS25445 (19023) | 19023..19214 | + | 192 | WP_214144721.1 | hypothetical protein | - |
| L1P11_RS25450 (20175) | 20175..20405 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| L1P11_RS25455 (20457) | 20457..21818 | + | 1362 | WP_235412052.1 | DUF3560 domain-containing protein | - |
| L1P11_RS25460 (21865) | 21865..22428 | + | 564 | WP_235412054.1 | class I SAM-dependent methyltransferase | - |
| L1P11_RS25465 (22514) | 22514..22957 | - | 444 | Protein_33 | hypothetical protein | - |
| L1P11_RS25470 (23027) | 23027..23233 | + | 207 | WP_000547944.1 | hypothetical protein | - |
| L1P11_RS25475 (23259) | 23259..23792 | + | 534 | WP_235412056.1 | single-stranded DNA-binding protein | - |
| L1P11_RS25480 (23849) | 23849..24082 | + | 234 | WP_105265877.1 | DUF905 domain-containing protein | - |
| L1P11_RS25485 (24146) | 24146..26104 | + | 1959 | WP_235412058.1 | ParB/RepB/Spo0J family partition protein | - |
| L1P11_RS25490 (26173) | 26173..26607 | + | 435 | WP_235412060.1 | conjugation system SOS inhibitor PsiB | - |
| L1P11_RS25495 (26604) | 26604..27323 | + | 720 | WP_112015160.1 | plasmid SOS inhibition protein A | - |
| L1P11_RS25500 (27323) | 27323..27841 | + | 519 | WP_112015161.1 | hypothetical protein | - |
| - (27817) | 27817..27970 | + | 154 | NuclAT_0 | - | - |
| - (27817) | 27817..27970 | + | 154 | NuclAT_0 | - | - |
| - (27817) | 27817..27970 | + | 154 | NuclAT_0 | - | - |
| - (27817) | 27817..27970 | + | 154 | NuclAT_0 | - | - |
| - (27817) | 27817..27970 | - | 154 | NuclAT_0 | - | - |
| L1P11_RS25505 (27958) | 27958..28110 | + | 153 | Protein_41 | FlmC family protein | - |
| L1P11_RS25510 (28055) | 28055..28177 | + | 123 | WP_223200913.1 | Hok/Gef family protein | - |
| L1P11_RS25515 (28415) | 28415..28778 | - | 364 | Protein_43 | hypothetical protein | - |
| L1P11_RS25520 (28848) | 28848..29054 | + | 207 | WP_000275856.1 | hypothetical protein | - |
| L1P11_RS25525 (29079) | 29079..29366 | + | 288 | WP_000107526.1 | hypothetical protein | - |
| L1P11_RS25530 (29485) | 29485..30306 | + | 822 | WP_001775119.1 | DUF932 domain-containing protein | - |
| L1P11_RS25535 (30603) | 30603..31205 | - | 603 | Protein_47 | hypothetical protein | VF |
| L1P11_RS25540 (31528) | 31528..31911 | + | 384 | WP_001428424.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L1P11_RS25545 (32104) | 32104..32775 | + | 672 | WP_032083167.1 | conjugal transfer transcriptional regulator TraJ | - |
| L1P11_RS25550 (32912) | 32912..33139 | + | 228 | WP_000089265.1 | conjugal transfer relaxosome protein TraY | - |
| L1P11_RS25555 (33172) | 33172..33534 | + | 363 | WP_001098998.1 | type IV conjugative transfer system pilin TraA | - |
| L1P11_RS25560 (33539) | 33539..33850 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| L1P11_RS25565 (33872) | 33872..34438 | + | 567 | WP_000399797.1 | type IV conjugative transfer system protein TraE | - |
| L1P11_RS25570 (34425) | 34425..35153 | + | 729 | WP_235412062.1 | type-F conjugative transfer system secretin TraK | - |
| L1P11_RS25575 (35153) | 35153..36579 | + | 1427 | Protein_55 | conjugal transfer protein TraB | - |
| L1P11_RS25580 (36569) | 36569..37153 | + | 585 | WP_001428422.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| L1P11_RS25585 (37140) | 37140..37457 | + | 318 | WP_001057281.1 | conjugal transfer protein TrbD | - |
| L1P11_RS25590 (37457) | 37457..37972 | + | 516 | WP_032083163.1 | type IV conjugative transfer system lipoprotein TraV | - |
| L1P11_RS25595 (38107) | 38107..38328 | + | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| L1P11_RS25600 (38321) | 38321..38734 | + | 414 | WP_096094297.1 | hypothetical protein | - |
| L1P11_RS25605 (38727) | 38727..39200 | + | 474 | WP_140431741.1 | hypothetical protein | - |
| L1P11_RS25610 (39280) | 39280..39525 | + | 246 | WP_032083161.1 | hypothetical protein | - |
| L1P11_RS25615 (39522) | 39522..39884 | + | 363 | WP_032083160.1 | hypothetical protein | - |
| L1P11_RS25620 (40010) | 40010..42640 | + | 2631 | WP_000069755.1 | type IV secretion system protein TraC | - |
| L1P11_RS25625 (42637) | 42637..43023 | + | 387 | WP_136747997.1 | type-F conjugative transfer system protein TrbI | - |
| L1P11_RS25630 (43020) | 43020..43652 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| L1P11_RS25635 (43649) | 43649..44641 | + | 993 | WP_000830183.1 | conjugal transfer pilus assembly protein TraU | - |
| L1P11_RS25640 (44671) | 44671..44976 | + | 306 | WP_137577077.1 | hypothetical protein | - |
| L1P11_RS25645 (44985) | 44985..45623 | + | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| L1P11_RS25650 (45620) | 45620..47428 | + | 1809 | WP_063078212.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| L1P11_RS25655 (47455) | 47455..47715 | + | 261 | WP_000864323.1 | conjugal transfer protein TrbE | - |
| L1P11_RS25660 (47708) | 47708..48450 | + | 743 | Protein_72 | type-F conjugative transfer system pilin assembly protein TraF | - |
| L1P11_RS25665 (48466) | 48466..48813 | + | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| L1P11_RS25670 (48932) | 48932..49216 | + | 285 | WP_000624108.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| L1P11_RS25675 (49203) | 49203..49748 | + | 546 | WP_000059818.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| L1P11_RS25680 (49738) | 49738..50052 | + | 315 | WP_001384255.1 | P-type conjugative transfer protein TrbJ | - |
| L1P11_RS25685 (50006) | 50006..50398 | + | 393 | WP_000126338.1 | F-type conjugal transfer protein TrbF | - |
| L1P11_RS25690 (50385) | 50385..51758 | + | 1374 | WP_053264201.1 | conjugal transfer pilus assembly protein TraH | - |
| L1P11_RS25695 (51755) | 51755..54577 | + | 2823 | WP_112015170.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| L1P11_RS25700 (54599) | 54599..55090 | + | 492 | WP_169015554.1 | entry exclusion protein | - |
| L1P11_RS25705 (55122) | 55122..55853 | + | 732 | WP_021559024.1 | conjugal transfer complement resistance protein TraT | - |
| L1P11_RS25710 (56056) | 56056..56792 | + | 737 | Protein_82 | hypothetical protein | - |
| L1P11_RS25715 (56843) | 56843..59005 | + | 2163 | WP_169014826.1 | type IV conjugative transfer system coupling protein TraD | - |
| L1P11_RS25720 (59005) | 59005..63171 | + | 4167 | WP_235412064.1 | conjugative transfer relaxase/helicase TraI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|