MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 60728 bp
Accession: NZ_CP091026 Location: 850391..911118 Organism: Escherichia coli strain STEC383 Replicon: chromosome
Accession: NZ_CP091026 Location: 850391..911118 Organism: Escherichia coli strain STEC383 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1P12_RS04065 (846128) | 846128..846937 | + | 810 | WP_001333829.1 | prepilin peptidase PppA | - |
| L1P12_RS04070 (847003) | 847003..847413 | + | 411 | WP_001460060.1 | type II secretion system pilot lipoprotein GspS-beta | - |
| L1P12_RS04075 (847431) | 847431..848390 | + | 960 | WP_096111138.1 | type II secretion system protein GspC | - |
| L1P12_RS04080 (848420) | 848420..848899 | + | 480 | Protein_802 | hypothetical protein | - |
| L1P12_RS04085 (848923) | 848923..849699 | + | 777 | WP_235387434.1 | type II secretion system protein GspL | - |
| L1P12_RS04090 (849701) | 849701..850237 | + | 537 | WP_059328842.1 | GspM family type II secretion system protein YghD | - |
| L1P12_RS04095 (850573) | 850573..852108 | - | 1536 | WP_001609560.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| L1P12_RS04100 (852179) | 852179..853024 | - | 846 | WP_032082786.1 | DUF4942 domain-containing protein | - |
| L1P12_RS04105 (853121) | 853121..853318 | - | 198 | WP_032082787.1 | DUF957 domain-containing protein | - |
| L1P12_RS04110 (853335) | 853335..853823 | - | 489 | WP_032082788.1 | DUF5983 family protein | - |
| L1P12_RS04115 (853820) | 853820..854194 | - | 375 | WP_032082789.1 | TA system toxin CbtA family protein | Toxin Detail |
| L1P12_RS04120 (854284) | 854284..854652 | - | 369 | WP_001774606.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| L1P12_RS04125 (854702) | 854702..855346 | - | 645 | WP_001774605.1 | hypothetical protein | - |
| L1P12_RS04130 (855365) | 855365..855586 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| L1P12_RS04135 (855649) | 855649..856125 | - | 477 | WP_001297237.1 | RadC family protein | - |
| L1P12_RS04140 (856141) | 856141..856620 | - | 480 | WP_032082790.1 | antirestriction protein | - |
| L1P12_RS04145 (856714) | 856714..856959 | - | 246 | WP_032082791.1 | hypothetical protein | - |
| L1P12_RS04150 (856959) | 856959..857777 | - | 819 | WP_044154198.1 | DUF932 domain-containing protein | - |
| L1P12_RS04155 (857876) | 857876..858109 | - | 234 | WP_001278287.1 | DUF905 family protein | - |
| L1P12_RS04160 (858115) | 858115..858792 | - | 678 | WP_001097305.1 | hypothetical protein | - |
| L1P12_RS04165 (858940) | 858940..859620 | - | 681 | WP_032082725.1 | WYL domain-containing protein | - |
| L1P12_RS04170 (859823) | 859823..860707 | - | 885 | WP_032082726.1 | 50S ribosome-binding GTPase | - |
| L1P12_RS04175 (860808) | 860808..862031 | + | 1224 | WP_032082727.1 | hypothetical protein | - |
| L1P12_RS04180 (863195) | 863195..863725 | - | 531 | WP_000778605.1 | hypothetical protein | - |
| L1P12_RS04185 (864395) | 864395..865126 | + | 732 | WP_001075491.1 | inovirus Gp2 family protein | - |
| L1P12_RS04190 (865453) | 865453..867057 | + | 1605 | WP_032082728.1 | YfjI family protein | - |
| L1P12_RS04195 (868596) | 868596..869162 | + | 567 | WP_001126818.1 | inovirus-type Gp2 protein | - |
| L1P12_RS04200 (869409) | 869409..869981 | + | 573 | WP_000991587.1 | hypothetical protein | - |
| L1P12_RS04205 (870050) | 870050..870286 | + | 237 | WP_000958094.1 | AlpA family transcriptional regulator | - |
| L1P12_RS04210 (870555) | 870555..871103 | + | 549 | WP_001167431.1 | hypothetical protein | - |
| L1P12_RS04215 (871122) | 871122..871466 | - | 345 | WP_000166949.1 | ProQ/FinO family protein | - |
| L1P12_RS04220 (871463) | 871463..871636 | - | 174 | WP_000258194.1 | hypothetical protein | - |
| L1P12_RS04225 (871772) | 871772..871945 | + | 174 | WP_153274857.1 | hypothetical protein | - |
| L1P12_RS04230 (872359) | 872359..872793 | + | 435 | WP_000038247.1 | H-NS family nucleoid-associated regulatory protein | - |
| L1P12_RS04235 (873210) | 873210..873779 | - | 570 | WP_000517677.1 | hypothetical protein | - |
| L1P12_RS04240 (873879) | 873879..875111 | - | 1233 | WP_000271619.1 | dNTP triphosphohydrolase | - |
| L1P12_RS04245 (875262) | 875262..876423 | - | 1162 | Protein_835 | IS3 family transposase IS3 | Transposase |
| L1P12_RS04250 (876591) | 876591..877571 | + | 981 | WP_000174035.1 | thymidylate synthase | - |
| L1P12_RS04255 (877568) | 877568..878512 | + | 945 | WP_000820616.1 | hypothetical protein | - |
| L1P12_RS04260 (878515) | 878515..879597 | - | 1083 | WP_000637420.1 | XRE family transcriptional regulator | - |
| L1P12_RS04265 (879840) | 879840..881068 | + | 1229 | WP_102384962.1 | IS3 family transposase IS2 | Transposase |
| L1P12_RS04270 (881400) | 881400..881663 | + | 264 | WP_000676590.1 | MazG-like family protein | - |
| L1P12_RS04275 (881966) | 881966..882480 | - | 515 | Protein_841 | ISL3 family transposase ISEc38 | Transposase |
| L1P12_RS04280 (883088) | 883088..886501 | + | 3414 | WP_000438165.1 | DEAD/DEAH box helicase family protein | - |
| L1P12_RS04285 (886565) | 886565..888199 | + | 1635 | WP_000627728.1 | class I SAM-dependent DNA methyltransferase | - |
| L1P12_RS04290 (888196) | 888196..889338 | + | 1143 | WP_000742120.1 | restriction endonuclease subunit S | - |
| L1P12_RS04295 (889347) | 889347..890228 | + | 882 | WP_033813019.1 | AAA family ATPase | - |
| L1P12_RS04300 (890274) | 890274..891254 | + | 981 | WP_000019441.1 | IS5 family transposase ISKpn26 | Transposase |
| L1P12_RS04305 (891236) | 891236..891649 | + | 414 | WP_235384732.1 | hypothetical protein | - |
| L1P12_RS04310 (891866) | 891866..892546 | + | 681 | WP_235387435.1 | hypothetical protein | - |
| L1P12_RS04315 (892769) | 892769..892947 | - | 179 | Protein_849 | integrase | - |
| L1P12_RS04320 (893177) | 893177..893914 | + | 738 | WP_032083034.1 | OmpW family outer membrane protein | - |
| L1P12_RS04325 (894334) | 894334..895230 | + | 897 | WP_000228490.1 | WYL domain-containing protein | - |
| L1P12_RS04330 (895279) | 895279..896358 | + | 1080 | WP_001207396.1 | hypothetical protein | - |
| L1P12_RS04335 (896405) | 896405..897976 | + | 1572 | WP_001100182.1 | ATP--cob(I)alamin adenosyltransferase | - |
| L1P12_RS04340 (897973) | 897973..898239 | + | 267 | WP_000766274.1 | YkgJ family cysteine cluster protein | - |
| L1P12_RS04345 (898379) | 898379..898576 | + | 198 | WP_001238006.1 | hypothetical protein | - |
| L1P12_RS04350 (898629) | 898629..900290 | + | 1662 | WP_021552163.1 | sulfatase-like hydrolase/transferase | - |
| L1P12_RS04355 (900751) | 900751..902043 | - | 1293 | WP_021552161.1 | MFS transporter | - |
| L1P12_RS04360 (902524) | 902524..902774 | - | 251 | Protein_858 | integrase core domain-containing protein | - |
| L1P12_RS04365 (903176) | 903176..903889 | + | 714 | WP_032082893.1 | outer membrane beta-barrel protein | - |
| L1P12_RS04370 (904064) | 904064..905560 | + | 1497 | WP_235387436.1 | phosphoethanolamine transferase | - |
| L1P12_RS04375 (905669) | 905669..909184 | - | 3516 | WP_032082891.1 | AAA domain-containing protein | - |
| L1P12_RS04380 (909636) | 909636..910898 | - | 1263 | WP_001218804.1 | Prophage integrase IntS ; Integrase | Integrase |
| L1P12_RS04390 (911277) | 911277..911984 | - | 708 | WP_000234514.1 | DUF554 domain-containing protein | - |
| L1P12_RS04395 (912137) | 912137..912220 | + | 84 | WP_211180506.1 | protein YqgH | - |
| L1P12_RS04400 (912382) | 912382..914517 | + | 2136 | WP_096111166.1 | ornithine decarboxylase | - |
| L1P12_RS04405 (914567) | 914567..915823 | - | 1257 | WP_001049791.1 | nucleoside permease NupG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|