MGE detailed information
MGE type: Prophage MGE length: 42669 bp
Accession: NZ_CP091024 Location: 1973673..2016341 Organism: Escherichia coli strain STEC379 Replicon: chromosome
Accession: NZ_CP091024 Location: 1973673..2016341 Organism: Escherichia coli strain STEC379 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1P13_RS09615 (1974122) | 1974122..1974919 | - | 798 | WP_001300307.1 | DgsA anti-repressor MtfA | - |
| L1P13_RS09625 (1975130) | 1975130..1976180 | - | 1051 | Protein_1883 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L1P13_RS09630 (1976180) | 1976180..1976383 | - | 204 | WP_000096344.1 | DUF4224 domain-containing protein | - |
| L1P13_RS09635 (1976442) | 1976442..1978913 | - | 2472 | WP_235399511.1 | exonuclease | - |
| L1P13_RS09640 (1979009) | 1979009..1979197 | - | 189 | WP_000199480.1 | DUF1482 family protein | - |
| L1P13_RS09645 (1979194) | 1979194..1979382 | - | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| L1P13_RS09650 (1979948) | 1979948..1980166 | - | 219 | WP_001171958.1 | protein YdfC | - |
| L1P13_RS25215 (1980196) | 1980196..1980324 | - | 129 | WP_000344925.1 | hypothetical protein | - |
| L1P13_RS09655 (1980326) | 1980326..1980481 | - | 156 | WP_000379589.1 | DUF1391 family protein | - |
| L1P13_RS09660 (1980773) | 1980773..1981051 | - | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L1P13_RS09665 (1981053) | 1981053..1981244 | - | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| L1P13_RS09670 (1981265) | 1981265..1981636 | - | 372 | WP_001169685.1 | hypothetical protein | - |
| L1P13_RS09675 (1981734) | 1981734..1982036 | + | 303 | WP_000172735.1 | transcriptional regulator | - |
| L1P13_RS09680 (1982033) | 1982033..1982458 | + | 426 | WP_235399512.1 | toxin YdaT family protein | - |
| L1P13_RS09685 (1982530) | 1982530..1983600 | + | 1071 | WP_235399513.1 | phage replisome organizer | - |
| L1P13_RS09690 (1983641) | 1983641..1984066 | + | 426 | WP_001151178.1 | DUF977 family protein | - |
| L1P13_RS09695 (1984063) | 1984063..1984263 | + | 201 | WP_001546006.1 | hypothetical protein | - |
| L1P13_RS09700 (1984334) | 1984334..1985031 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| L1P13_RS09705 (1985135) | 1985135..1985317 | + | 183 | WP_001224945.1 | hypothetical protein | - |
| L1P13_RS09710 (1985310) | 1985310..1985486 | + | 177 | WP_000753061.1 | hypothetical protein | - |
| L1P13_RS09715 (1985483) | 1985483..1985998 | + | 516 | WP_001289996.1 | hypothetical protein | - |
| L1P13_RS09720 (1986139) | 1986139..1986396 | + | 258 | WP_001176099.1 | hypothetical protein | - |
| L1P13_RS09725 (1986650) | 1986650..1986805 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| L1P13_RS09730 (1986949) | 1986949..1987341 | + | 393 | WP_000737636.1 | hypothetical protein | - |
| L1P13_RS09735 (1987638) | 1987638..1987916 | + | 279 | WP_024175747.1 | hypothetical protein | - |
| L1P13_RS09740 (1987918) | 1987918..1988973 | + | 1056 | WP_024188444.1 | DUF968 domain-containing protein | - |
| L1P13_RS09745 (1988974) | 1988974..1989339 | + | 366 | WP_226156763.1 | RusA family crossover junction endodeoxyribonuclease | - |
| L1P13_RS09750 (1989336) | 1989336..1990025 | + | 690 | WP_016240600.1 | bacteriophage antitermination protein Q | - |
| L1P13_RS09770 (1990822) | 1990822..1991037 | + | 216 | WP_000839572.1 | class II holin family protein | - |
| L1P13_RS09775 (1991042) | 1991042..1991392 | + | 351 | WP_000193289.1 | YdfR family protein | - |
| L1P13_RS09780 (1991456) | 1991456..1991989 | + | 534 | WP_000992100.1 | lysozyme | - |
| L1P13_RS09785 (1992206) | 1992206..1992391 | + | 186 | WP_001228685.1 | Rz1 family lipoprotein | - |
| L1P13_RS09790 (1992609) | 1992609..1992875 | + | 267 | WP_001100260.1 | hypothetical protein | - |
| L1P13_RS09795 (1992881) | 1992881..1993420 | - | 540 | WP_000351660.1 | YfbU family protein | - |
| L1P13_RS09800 (1993559) | 1993559..1993909 | + | 351 | WP_001111090.1 | HNH endonuclease signature motif containing protein | - |
| L1P13_RS09805 (1994057) | 1994057..1994539 | + | 483 | WP_001333563.1 | phage terminase small subunit P27 family | - |
| L1P13_RS09810 (1994539) | 1994539..1996296 | + | 1758 | WP_001140892.1 | terminase large subunit | - |
| L1P13_RS09815 (1996293) | 1996293..1996454 | + | 162 | WP_000811487.1 | hypothetical protein | - |
| L1P13_RS09820 (1996444) | 1996444..1997670 | + | 1227 | WP_000923129.1 | phage portal protein | - |
| L1P13_RS09825 (1997663) | 1997663..1998262 | + | 600 | WP_000999828.1 | HK97 family phage prohead protease | - |
| L1P13_RS09830 (1998277) | 1998277..1999494 | + | 1218 | WP_000766109.1 | phage major capsid protein | - |
| L1P13_RS09835 (1999571) | 1999571..1999888 | + | 318 | WP_000719066.1 | head-tail connector protein | - |
| L1P13_RS09840 (1999897) | 1999897..2000235 | + | 339 | WP_001147814.1 | phage head closure protein | - |
| L1P13_RS09845 (2000232) | 2000232..2000681 | + | 450 | WP_042092541.1 | HK97 gp10 family phage protein | - |
| L1P13_RS09850 (2000678) | 2000678..2001022 | + | 345 | WP_001206306.1 | DUF3168 domain-containing protein | - |
| L1P13_RS09855 (2001082) | 2001082..2001786 | + | 705 | WP_096094254.1 | immunoglobulin domain-containing protein | - |
| L1P13_RS09860 (2001801) | 2001801..2002172 | + | 372 | WP_021543293.1 | phage tail assembly chaperone | - |
| L1P13_RS09865 (2002196) | 2002196..2002474 | + | 279 | WP_042092542.1 | DUF4035 domain-containing protein | - |
| L1P13_RS09870 (2002521) | 2002521..2005748 | + | 3228 | WP_053271052.1 | phage tail tape measure protein | - |
| L1P13_RS09875 (2005726) | 2005726..2006082 | + | 357 | WP_001330090.1 | phage tail protein | - |
| L1P13_RS09880 (2006082) | 2006082..2006780 | + | 699 | WP_060565118.1 | phage minor tail protein L | - |
| L1P13_RS09885 (2006786) | 2006786..2007529 | + | 744 | WP_074511599.1 | C40 family peptidase | - |
| L1P13_RS09890 (2007427) | 2007427..2008074 | + | 648 | WP_000741572.1 | tail assembly protein | - |
| L1P13_RS09895 (2008135) | 2008135..2011614 | + | 3480 | WP_235399514.1 | host specificity protein J | - |
| L1P13_RS09900 (2011683) | 2011683..2012282 | + | 600 | WP_001233114.1 | Outer membrane protein X | VF |
| L1P13_RS09905 (2012347) | 2012347..2015760 | + | 3414 | WP_235399515.1 | prophage tail fiber N-terminal domain-containing protein | - |
| L1P13_RS09910 (2015760) | 2015760..2016341 | + | 582 | WP_000885585.1 | tail fiber assembly protein | - |
| L1P13_RS09915 (2017831) | 2017831..2018361 | - | 531 | WP_001079074.1 | cytochrome b | - |
| L1P13_RS09920 (2018704) | 2018704..2019354 | - | 651 | WP_001007759.1 | metal-binding protein ZinT | - |
| L1P13_RS09925 (2019611) | 2019611..2020246 | - | 636 | WP_001240105.1 | protein-methionine-sulfoxide reductase heme-binding subunit MsrQ | - |
| L1P13_RS09930 (2020247) | 2020247..2021251 | - | 1005 | WP_000730130.1 | protein-methionine-sulfoxide reductase catalytic subunit MsrP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|