MGE detailed information
MGE type: Prophage MGE length: 57973 bp
Accession: NZ_CP091022 Location: 2332728..2390700 Organism: Escherichia coli strain STEC276 Replicon: chromosome
Accession: NZ_CP091022 Location: 2332728..2390700 Organism: Escherichia coli strain STEC276 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1O93_RS11230 (2328977) | 2328977..2331403 | - | 2427 | WP_029487570.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| L1O93_RS11235 (2331602) | 2331602..2331907 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| L1O93_RS11240 (2332015) | 2332015..2332725 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| L1O93_RS11245 (2332728) | 2332728..2333288 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| L1O93_RS11250 (2333323) | 2333323..2333664 | - | 342 | WP_029487569.1 | DUF1283 family protein | - |
| L1O93_RS11255 (2333799) | 2333799..2334125 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| L1O93_RS11260 (2334331) | 2334331..2335545 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| L1O93_RS11265 (2335557) | 2335557..2336576 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| L1O93_RS11270 (2336764) | 2336764..2338044 | - | 1281 | WP_000877001.1 | hypothetical protein ; Integrase | Integrase |
| L1O93_RS11275 (2338079) | 2338079..2338330 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| L1O93_RS11280 (2338403) | 2338403..2340874 | - | 2472 | Protein_2214 | 3'-5' exoribonuclease | - |
| L1O93_RS11285 (2340968) | 2340968..2341159 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| L1O93_RS11290 (2341156) | 2341156..2341344 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| L1O93_RS24255 (2342305) | 2342305..2342406 | - | 102 | Protein_2217 | protein YdfB | - |
| L1O93_RS11300 (2342408) | 2342408..2342563 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| L1O93_RS11305 (2342730) | 2342730..2343137 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| L1O93_RS11310 (2343221) | 2343221..2343451 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| L1O93_RS11315 (2343435) | 2343435..2343956 | + | 522 | WP_000705349.1 | toxin YdaT family protein | - |
| L1O93_RS11320 (2343937) | 2343937..2344902 | + | 966 | WP_000054506.1 | hypothetical protein | - |
| L1O93_RS11325 (2344943) | 2344943..2345362 | + | 420 | WP_001151195.1 | DUF977 family protein | - |
| L1O93_RS11330 (2345417) | 2345417..2346466 | + | 1050 | Protein_2224 | ISNCY family transposase ISCARN112 | Transposase |
| L1O93_RS11335 (2346587) | 2346587..2346736 | + | 150 | WP_180302674.1 | ISNCY family transposase ISCARN112 | Transposase |
| L1O93_RS11340 (2347173) | 2347173..2347505 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| L1O93_RS11345 (2347708) | 2347708..2348013 | - | 306 | WP_001326990.1 | protein YdfV | - |
| L1O93_RS11350 (2348038) | 2348038..2348277 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| L1O93_RS11355 (2348277) | 2348277..2348564 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| L1O93_RS11360 (2348636) | 2348636..2348791 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| L1O93_RS11365 (2349008) | 2349008..2349259 | + | 252 | WP_000980994.1 | protein Rem | - |
| L1O93_RS11370 (2349326) | 2349326..2349604 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| L1O93_RS11375 (2349606) | 2349606..2350655 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| L1O93_RS11380 (2350669) | 2350669..2351421 | + | 753 | WP_001047135.1 | antitermination protein | - |
| L1O93_RS11385 (2351699) | 2351699..2351788 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| L1O93_RS11390 (2351843) | 2351843..2352055 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| L1O93_RS11395 (2352356) | 2352356..2352571 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| L1O93_RS11400 (2352935) | 2352935..2353105 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| L1O93_RS11405 (2353325) | 2353325..2353540 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| L1O93_RS11410 (2353545) | 2353545..2353859 | + | 315 | WP_000189909.1 | YdfR family protein | - |
| L1O93_RS11415 (2353979) | 2353979..2354776 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| L1O93_RS11420 (2354776) | 2354776..2355948 | - | 1173 | WP_240992422.1 | IS21 family transposase IS21 | Transposase |
| L1O93_RS11425 (2356050) | 2356050..2356583 | + | 534 | WP_001092965.1 | lysozyme | - |
| L1O93_RS11430 (2356580) | 2356580..2357077 | + | 498 | WP_001071777.1 | DUF2514 domain-containing protein | - |
| L1O93_RS11435 (2357441) | 2357441..2357653 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| L1O93_RS11440 (2357664) | 2357664..2357852 | + | 189 | WP_071526745.1 | cold-shock protein | - |
| L1O93_RS11445 (2357855) | 2357855..2357893 | + | 39 | Protein_2247 | hypothetical protein | - |
| L1O93_RS11450 (2357924) | 2357924..2358154 | + | 231 | WP_000720960.1 | protein YnfN | - |
| L1O93_RS11455 (2358327) | 2358327..2358500 | + | 174 | WP_001019207.1 | addiction module toxin, GnsA/GnsB family | - |
| L1O93_RS11460 (2358795) | 2358795..2359001 | + | 207 | WP_020239410.1 | hypothetical protein | - |
| L1O93_RS11465 (2359173) | 2359173..2360335 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| L1O93_RS11470 (2360513) | 2360513..2360707 | - | 195 | WP_032145128.1 | YlcI/YnfO family protein | - |
| L1O93_RS11475 (2361096) | 2361096..2361641 | + | 546 | WP_000453617.1 | DNA-packaging protein | - |
| L1O93_RS11480 (2361616) | 2361616..2363541 | + | 1926 | WP_001027290.1 | phage terminase large subunit family protein | - |
| L1O93_RS11485 (2363538) | 2363538..2363744 | + | 207 | WP_000198149.1 | gpW family protein | - |
| L1O93_RS11490 (2363741) | 2363741..2365342 | + | 1602 | WP_029487890.1 | phage portal protein | - |
| L1O93_RS11495 (2365323) | 2365323..2366642 | + | 1320 | WP_029487889.1 | S49 family peptidase | - |
| L1O93_RS11500 (2366652) | 2366652..2366984 | + | 333 | WP_001338090.1 | head decoration protein | - |
| L1O93_RS11505 (2367040) | 2367040..2368065 | + | 1026 | WP_020239411.1 | major capsid protein | - |
| L1O93_RS11510 (2368107) | 2368107..2368502 | + | 396 | WP_000158882.1 | DNA-packaging protein FI | - |
| L1O93_RS11515 (2368514) | 2368514..2368867 | + | 354 | WP_000752954.1 | head-tail joining protein | - |
| L1O93_RS11520 (2368879) | 2368879..2369457 | + | 579 | WP_016245263.1 | phage tail protein | - |
| L1O93_RS11525 (2369454) | 2369454..2369849 | + | 396 | WP_000683128.1 | phage minor tail U family protein | - |
| L1O93_RS11530 (2369857) | 2369857..2370597 | + | 741 | WP_001357869.1 | phage tail protein | - |
| L1O93_RS11535 (2370613) | 2370613..2371035 | + | 423 | WP_029487888.1 | phage minor tail protein G | - |
| L1O93_RS11540 (2371017) | 2371017..2371451 | + | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| L1O93_RS11545 (2371444) | 2371444..2374023 | + | 2580 | WP_240992423.1 | phage tail tape measure protein | - |
| L1O93_RS11550 (2374020) | 2374020..2374349 | + | 330 | WP_000847331.1 | phage tail protein | - |
| L1O93_RS11555 (2374349) | 2374349..2375047 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| L1O93_RS11560 (2375053) | 2375053..2375796 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| L1O93_RS11565 (2375793) | 2375793..2376365 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| L1O93_RS11570 (2376426) | 2376426..2379905 | + | 3480 | WP_029487886.1 | host specificity protein J | - |
| L1O93_RS11575 (2379973) | 2379973..2380572 | + | 600 | WP_001568881.1 | hypothetical protein | VF |
| L1O93_RS11580 (2380637) | 2380637..2384167 | + | 3531 | WP_000279149.1 | prophage tail fiber N-terminal domain-containing protein | - |
| L1O93_RS11585 (2384167) | 2384167..2384742 | + | 576 | WP_001439069.1 | tail fiber assembly protein | - |
| L1O93_RS11590 (2384840) | 2384840..2385430 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| L1O93_RS11595 (2385747) | 2385747..2385980 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| L1O93_RS11600 (2386049) | 2386049..2386162 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| L1O93_RS11605 (2386766) | 2386766..2388049 | + | 1284 | Protein_2279 | MHS family MFS transporter YdfJ | - |
| L1O93_RS11610 (2388138) | 2388138..2389598 | + | 1461 | WP_000527806.1 | mannitol dehydrogenase family protein | - |
| L1O93_RS11615 (2389634) | 2389634..2389837 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| L1O93_RS11620 (2390014) | 2390014..2390700 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| L1O93_RS11625 (2390789) | 2390789..2391535 | - | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| L1O93_RS11630 (2391672) | 2391672..2393717 | + | 2046 | WP_029487640.1 | peptidyl-dipeptidase Dcp | - |
| L1O93_RS11635 (2393762) | 2393762..2394280 | - | 519 | WP_029487641.1 | 2-oxo-tetronate isomerase | - |
| L1O93_RS11640 (2394556) | 2394556..2394948 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|