MGE detailed information
MGE type: Prophage MGE length: 83614 bp
Accession: NZ_CP091022 Location: 1992559..2076172 Organism: Escherichia coli strain STEC276 Replicon: chromosome
Accession: NZ_CP091022 Location: 1992559..2076172 Organism: Escherichia coli strain STEC276 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1O93_RS09450 () | 1989607..1990578 | - | 972 | WP_000564726.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| L1O93_RS09455 () | 1990575..1991318 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| L1O93_RS09460 () | 1991359..1991754 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| L1O93_RS09465 () | 1991807..1992577 | - | 771 | WP_044151905.1 | DUF72 domain-containing protein | - |
| L1O93_RS09470 () | 1992559..1993872 | - | 1314 | WP_000361999.1 | hypothetical protein ; Integrase | Integrase |
| L1O93_RS09475 () | 1993928..1994164 | - | 237 | WP_000528717.1 | excisionase family protein | - |
| L1O93_RS09480 () | 1994173..1994319 | - | 147 | WP_001030139.1 | hypothetical protein | - |
| L1O93_RS09485 () | 1994323..1994565 | - | 243 | WP_240992412.1 | DUF4222 domain-containing protein | - |
| L1O93_RS09490 () | 1994597..1994968 | - | 372 | WP_236300910.1 | DUF5406 family protein | - |
| L1O93_RS09495 () | 1995009..1995836 | - | 828 | WP_021558721.1 | SPFH domain-containing protein | - |
| L1O93_RS09500 () | 1995833..1996021 | - | 189 | WP_001242070.1 | hypothetical protein | - |
| L1O93_RS09505 () | 1996198..1996779 | - | 582 | WP_240992413.1 | hypothetical protein | - |
| L1O93_RS09510 () | 1996776..1996964 | - | 189 | WP_000391589.1 | hypothetical protein | - |
| L1O93_RS09515 () | 1997161..1997367 | - | 207 | WP_000141090.1 | hypothetical protein | - |
| L1O93_RS09520 () | 1997523..1997984 | - | 462 | WP_021558724.1 | helix-turn-helix transcriptional regulator | - |
| L1O93_RS09525 () | 1998130..1998819 | - | 690 | WP_000800136.1 | LexA family transcriptional regulator | - |
| L1O93_RS09530 () | 1998953..1999267 | + | 315 | WP_096094272.1 | YdaS family helix-turn-helix protein | - |
| L1O93_RS09535 () | 1999230..1999538 | + | 309 | WP_000081757.1 | hypothetical protein | - |
| L1O93_RS09540 () | 1999952..2001610 | + | 1659 | WP_000424041.1 | DEAD/DEAH box helicase | - |
| L1O93_RS09545 () | 2001612..2002580 | + | 969 | WP_000844628.1 | toprim domain-containing protein | - |
| L1O93_RS09550 () | 2002580..2003437 | + | 858 | WP_096094270.1 | helix-turn-helix domain containing protein | - |
| L1O93_RS09555 () | 2003437..2004252 | + | 816 | WP_096094267.1 | antitermination protein | - |
| L1O93_RS09560 () | 2004388..2005332 | - | 945 | WP_096111884.1 | hypothetical protein | - |
| L1O93_RS09570 () | 2005797..2006756 | + | 960 | WP_135460424.1 | hypothetical protein | VF |
| L1O93_RS09575 () | 2006769..2007032 | + | 264 | WP_000738063.1 | hypothetical protein | VF |
| L1O93_RS09580 () | 2007451..2007843 | + | 393 | WP_064578938.1 | putative holin | - |
| L1O93_RS09585 () | 2007833..2008108 | + | 276 | WP_015967633.1 | phage holin family protein | - |
| L1O93_RS09590 () | 2008111..2008488 | + | 378 | WP_062887077.1 | M15 family metallopeptidase | - |
| L1O93_RS09595 () | 2008530..2008700 | + | 171 | WP_240992414.1 | hypothetical protein | - |
| L1O93_RS09600 () | 2008756..2009019 | + | 264 | WP_062887078.1 | hypothetical protein | - |
| L1O93_RS09605 () | 2009280..2009630 | + | 351 | WP_001140106.1 | HNH endonuclease signature motif containing protein | - |
| L1O93_RS09610 () | 2009746..2010216 | + | 471 | WP_015967638.1 | phage terminase small subunit P27 family | - |
| L1O93_RS09615 () | 2010213..2011943 | + | 1731 | WP_032083242.1 | terminase large subunit | - |
| L1O93_RS09620 () | 2011955..2012137 | + | 183 | WP_015967640.1 | protein YmfR | - |
| L1O93_RS09625 () | 2012137..2013378 | + | 1242 | WP_015967641.1 | phage portal protein | - |
| L1O93_RS09630 () | 2013356..2014006 | + | 651 | WP_001193625.1 | HK97 family phage prohead protease | - |
| L1O93_RS09635 () | 2014017..2015243 | + | 1227 | WP_096098206.1 | phage major capsid protein | - |
| L1O93_RS09640 () | 2015290..2015613 | + | 324 | WP_000924706.1 | head-tail connector protein | - |
| L1O93_RS09645 () | 2015610..2016026 | + | 417 | WP_000702444.1 | phage head closure protein | - |
| L1O93_RS09650 () | 2015992..2016516 | + | 525 | WP_053272705.1 | hypothetical protein | - |
| L1O93_RS09655 () | 2016513..2016830 | + | 318 | Protein_1891 | hypothetical protein | - |
| L1O93_RS09660 () | 2016878..2018247 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| L1O93_RS09665 () | 2018292..2018522 | + | 231 | Protein_1893 | hypothetical protein | - |
| L1O93_RS09670 () | 2018532..2018693 | + | 162 | WP_047085173.1 | DUF2635 domain-containing protein | - |
| L1O93_RS09675 () | 2018690..2020186 | + | 1497 | WP_240992415.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| L1O93_RS09680 () | 2020186..2020542 | + | 357 | WP_001062339.1 | phage tail tube protein | - |
| L1O93_RS09685 () | 2020542..2020871 | + | 330 | WP_000117144.1 | phage tail assembly protein | - |
| L1O93_RS09690 () | 2020956..2022905 | + | 1950 | WP_015967644.1 | phage tail tape measure protein | - |
| L1O93_RS09695 () | 2022921..2024312 | + | 1392 | WP_015967645.1 | DNA circularization N-terminal domain-containing protein | - |
| L1O93_RS09700 () | 2024309..2025364 | + | 1056 | WP_015967646.1 | putative tail protein | - |
| L1O93_RS09705 () | 2025364..2025897 | + | 534 | WP_063123876.1 | phage baseplate assembly protein V | - |
| L1O93_RS09710 () | 2025903..2026316 | + | 414 | WP_032083387.1 | phage GP46 family protein | - |
| L1O93_RS09715 () | 2026309..2027391 | + | 1083 | WP_180418174.1 | baseplate J/gp47 family protein | - |
| L1O93_RS09720 () | 2027391..2027981 | + | 591 | WP_000380341.1 | DUF2313 domain-containing protein | - |
| L1O93_RS09725 () | 2027968..2028987 | + | 1020 | WP_086186320.1 | phage tail protein | - |
| L1O93_RS09730 () | 2029001..2029531 | + | 531 | WP_032083368.1 | tail fiber assembly protein | - |
| L1O93_RS09735 () | 2029555..2031027 | + | 1473 | WP_015967651.1 | prophage tail fiber N-terminal domain-containing protein | - |
| L1O93_RS09740 () | 2031027..2031590 | + | 564 | WP_240992425.1 | DUF4376 domain-containing protein | - |
| L1O93_RS09745 () | 2031911..2032006 | - | 96 | Protein_1909 | hypothetical protein | - |
| L1O93_RS09750 () | 2032003..2032569 | - | 567 | WP_000891621.1 | hydrolase | - |
| L1O93_RS09755 () | 2032879..2034651 | + | 1773 | WP_001258678.1 | aspartate--tRNA ligase | - |
| L1O93_RS09760 () | 2034769..2035221 | + | 453 | WP_001300367.1 | dihydroneopterin triphosphate diphosphatase | - |
| L1O93_RS09765 () | 2035250..2035990 | + | 741 | WP_000907234.1 | hypothetical protein | VF |
| L1O93_RS09770 () | 2036025..2036546 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| L1O93_RS09775 () | 2036548..2037150 | - | 603 | WP_001024904.1 | YebB family permuted papain-like enzyme | - |
| L1O93_RS09780 () | 2037221..2037286 | + | 66 | WP_072094247.1 | stress response small protein YobI | - |
| L1O93_RS09785 () | 2037425..2038036 | + | 612 | WP_000580327.1 | Holliday junction branch migration protein RuvA | - |
| L1O93_RS09790 () | 2038045..2039055 | + | 1011 | WP_000568519.1 | Holliday junction branch migration DNA helicase RuvB | - |
| L1O93_RS09795 () | 2039202..2039987 | - | 786 | WP_000571479.1 | hypothetical protein | VF |
| L1O93_RS09800 () | 2039984..2040739 | - | 756 | WP_000202990.1 | hypothetical protein | VF |
| L1O93_RS09805 () | 2040818..2041750 | + | 933 | WP_029487624.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| L1O93_RS09810 () | 2041766..2043088 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| L1O93_RS09815 () | 2043208..2044179 | + | 972 | WP_000448381.1 | UDP-glucose 4-epimerase | VF |
| L1O93_RS09820 () | 2044310..2045752 | - | 1443 | WP_000091148.1 | pyruvate kinase | - |
| L1O93_RS09825 () | 2045880..2046749 | - | 870 | WP_001056706.1 | DNA-binding transcriptional regulator HexR | - |
| L1O93_RS09830 () | 2047087..2048562 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| L1O93_RS09835 () | 2048797..2050608 | + | 1812 | WP_001069487.1 | phosphogluconate dehydratase | - |
| L1O93_RS09840 () | 2050645..2051286 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| L1O93_RS09845 () | 2051342..2052520 | - | 1179 | WP_001515449.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| L1O93_RS09850 () | 2052654..2052944 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| L1O93_RS09855 () | 2053011..2053367 | + | 357 | WP_001295500.1 | protein YebF | - |
| L1O93_RS09860 () | 2053694..2054353 | + | 660 | WP_001515447.1 | tellurite resistance TerB family protein | - |
| L1O93_RS09865 () | 2054562..2056622 | + | 2061 | WP_001515446.1 | oligopeptidase B | - |
| L1O93_RS09870 () | 2056619..2057281 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| L1O93_RS09875 () | 2057305..2057961 | - | 657 | WP_000011660.1 | carbon-nitrogen hydrolase family protein YobB | - |
| L1O93_RS09880 () | 2058063..2058293 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| L1O93_RS09885 () | 2058432..2058806 | + | 375 | WP_000168739.1 | CopC domain-containing protein YobA | - |
| L1O93_RS09890 () | 2058810..2059682 | + | 873 | WP_000879277.1 | copper homeostasis membrane protein CopD | - |
| L1O93_RS09895 () | 2059695..2060036 | + | 342 | WP_001515445.1 | YebY family protein | - |
| - | 2060066..2060334 | - | 269 | - | - | Antitoxin Detail |
| - | 2060193..2060296 | + | 104 | - | - | Toxin Detail |
| L1O93_RS09900 () | 2060431..2061087 | + | 657 | WP_001515444.1 | protein-serine/threonine phosphatase | - |
| L1O93_RS09905 () | 2061088..2061279 | - | 192 | WP_001296140.1 | YebW family protein | - |
| L1O93_RS09910 () | 2061384..2061620 | - | 237 | WP_001295499.1 | YebV family protein | - |
| L1O93_RS09915 () | 2061738..2063177 | - | 1440 | WP_024189843.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| L1O93_RS09920 () | 2063257..2065890 | - | 2634 | WP_240992416.1 | hypothetical protein | VF |
| L1O93_RS09925 () | 2065859..2067142 | - | 1284 | WP_001207283.1 | membrane integrity lipid transport subunit YebS | - |
| L1O93_RS09930 () | 2067272..2067769 | + | 498 | WP_001043882.1 | L-methionine (R)-S-oxide reductase | - |
| L1O93_RS09935 () | 2067866..2068564 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| L1O93_RS09940 () | 2068584..2070632 | + | 2049 | WP_001315679.1 | carboxy terminal-processing peptidase | - |
| L1O93_RS09945 () | 2070824..2071705 | + | 882 | WP_000984517.1 | protease HtpX | - |
| L1O93_RS09950 () | 2071751..2073124 | - | 1374 | WP_001127216.1 | MFS transporter | - |
| L1O93_RS09955 () | 2073301..2074092 | + | 792 | WP_001262182.1 | DNA-binding transcriptional regulator KdgR | - |
| L1O93_RS09960 () | 2074235..2074474 | - | 240 | WP_001211011.1 | YobH family protein | - |
| L1O93_RS09965 () | 2074633..2074776 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| L1O93_RS09970 () | 2074851..2075138 | + | 288 | WP_001006866.1 | YebO family protein | - |
| L1O93_RS09975 () | 2075807..2075950 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| L1O93_RS09980 () | 2075963..2076172 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| L1O93_RS09985 () | 2076338..2077147 | + | 810 | WP_000010115.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| L1O93_RS09990 () | 2077144..2077710 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| L1O93_RS09995 () | 2078139..2078597 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| L1O93_RS10000 () | 2078652..2079503 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| L1O93_RS10005 () | 2079516..2080316 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|