MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89974 bp
Accession: NZ_CP090964 Location: 1..89974 Organism: Edwardsiella piscicida strain CZ12001 Replicon: plasmid unnamed2
Accession: NZ_CP090964 Location: 1..89974 Organism: Edwardsiella piscicida strain CZ12001 Replicon: plasmid unnamed2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1P06_RS18025 (L1P06_18025) | 47..487 | + | 441 | WP_236893538.1 | DUF1419 domain-containing protein | - |
| L1P06_RS18030 (L1P06_18030) | 580..846 | + | 267 | WP_236893539.1 | hypothetical protein | - |
| L1P06_RS18035 (L1P06_18035) | 1501..2334 | + | 834 | WP_236893540.1 | DUF932 domain-containing protein | - |
| L1P06_RS18040 (L1P06_18040) | 2509..2820 | - | 312 | WP_236893542.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| L1P06_RS18045 (L1P06_18045) | 3100..3444 | + | 345 | WP_109609900.1 | plasmid mobilization protein MobA | - |
| L1P06_RS18050 (L1P06_18050) | 3446..5371 | + | 1926 | WP_236893544.1 | Protein TraI | Relaxase |
| L1P06_RS18055 (L1P06_18055) | 5392..5916 | + | 525 | WP_236893546.1 | hypothetical protein | - |
| L1P06_RS18060 (L1P06_18060) | 6159..6680 | - | 522 | WP_236893548.1 | phospholipase D family protein | - |
| L1P06_RS18065 (L1P06_18065) | 6601..8931 | - | 2331 | WP_236893550.1 | hypothetical protein | VF |
| L1P06_RS18070 (L1P06_18070) | 8942..9958 | - | 1017 | WP_236893552.1 | DsbC family protein | - |
| L1P06_RS18075 (L1P06_18075) | 9962..11233 | - | 1272 | WP_236893554.1 | conjugal transfer protein TrbA | - |
| L1P06_RS18080 (L1P06_18080) | 11317..11997 | - | 681 | WP_236893556.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L1P06_RS18085 (L1P06_18085) | 12015..12302 | - | 288 | WP_109609915.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L1P06_RS18090 (L1P06_18090) | 12299..12550 | - | 252 | WP_236893559.1 | antitoxin | Antitoxin Detail |
| L1P06_RS18095 (L1P06_18095) | 12641..14788 | - | 2148 | WP_236893560.1 | DotA/TraY family protein | - |
| L1P06_RS18100 (L1P06_18100) | 14843..15361 | - | 519 | WP_236893561.1 | conjugal transfer protein TraX | - |
| L1P06_RS18105 (L1P06_18105) | 15358..16554 | - | 1197 | WP_236893562.1 | conjugal transfer protein TraW | - |
| L1P06_RS18110 (L1P06_18110) | 16569..19646 | - | 3078 | WP_236893563.1 | ATP-binding protein | - |
| L1P06_RS18115 (L1P06_18115) | 19670..20623 | - | 954 | WP_236893564.1 | hypothetical protein | - |
| L1P06_RS18120 (L1P06_18120) | 20674..21057 | - | 384 | WP_109609928.1 | hypothetical protein | - |
| L1P06_RS18125 (L1P06_18125) | 21084..21611 | - | 528 | WP_181367134.1 | conjugal transfer protein TraQ | - |
| L1P06_RS18130 (L1P06_18130) | 21620..22381 | - | 762 | WP_236893565.1 | hypothetical protein | - |
| L1P06_RS18135 (L1P06_18135) | 22393..23643 | - | 1251 | WP_236893566.1 | conjugal transfer protein TraO | - |
| L1P06_RS18140 (L1P06_18140) | 23646..24623 | - | 978 | WP_181367136.1 | hypothetical protein | VF |
| L1P06_RS18145 (L1P06_18145) | 24642..25364 | - | 723 | WP_236893569.1 | hypothetical protein | VF |
| L1P06_RS18150 (L1P06_18150) | 25378..25821 | - | 444 | WP_227016278.1 | hypothetical protein | - |
| L1P06_RS18155 (L1P06_18155) | 25829..29206 | - | 3378 | WP_236893571.1 | DUF5710 domain-containing protein | - |
| L1P06_RS18160 (L1P06_18160) | 29222..29482 | - | 261 | WP_236893573.1 | IcmT/TraK family protein | - |
| L1P06_RS18165 (L1P06_18165) | 29479..30636 | - | 1158 | WP_236893575.1 | Twitching mobility protein | VF |
| L1P06_RS18170 (L1P06_18170) | 30633..31418 | - | 786 | WP_236893577.1 | hypothetical protein | VF |
| L1P06_RS18175 (L1P06_18175) | 31415..31816 | - | 402 | WP_236893596.1 | DotD/TraH family lipoprotein | - |
| L1P06_RS18180 (L1P06_18180) | 31882..33039 | - | 1158 | WP_236893579.1 | site-specific integrase | - |
| L1P06_RS18185 (L1P06_18185) | 33549..34790 | - | 1242 | WP_236893581.1 | hypothetical protein | VF |
| L1P06_RS18190 (L1P06_18190) | 35455..35937 | - | 483 | WP_236893583.1 | hypothetical protein | VF |
| L1P06_RS18195 (L1P06_18195) | 35992..36585 | - | 594 | WP_236893585.1 | hypothetical protein | VF |
| L1P06_RS18200 (L1P06_18200) | 36632..37744 | - | 1113 | WP_236893586.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| L1P06_RS18205 (L1P06_18205) | 37741..39228 | - | 1488 | WP_236893587.1 | Type II secretion system protein E | VF |
| L1P06_RS18210 (L1P06_18210) | 39234..39797 | - | 564 | WP_236893588.1 | hypothetical protein | VF |
| L1P06_RS18215 (L1P06_18215) | 39787..41079 | - | 1293 | WP_236893589.1 | type 4b pilus protein PilO2 | - |
| L1P06_RS18220 (L1P06_18220) | 41083..42693 | - | 1611 | WP_236893590.1 | Outer membrane lipoprotein BfpB | VF |
| L1P06_RS18225 (L1P06_18225) | 42719..43144 | - | 426 | WP_236893591.1 | type IV pilus biogenesis protein PilM | - |
| L1P06_RS18230 (L1P06_18230) | 43198..44226 | - | 1029 | WP_236893592.1 | hypothetical protein | VF |
| L1P06_RS18235 (L1P06_18235) | 44585..45280 | - | 696 | WP_236893593.1 | hypothetical protein | - |
| L1P06_RS18240 (L1P06_18240) | 45492..46001 | - | 510 | WP_109609955.1 | transcription termination/antitermination NusG family protein | - |
| L1P06_RS18245 (L1P06_18245) | 46295..46657 | + | 363 | WP_236893519.1 | helix-turn-helix transcriptional regulator | - |
| L1P06_RS18250 (L1P06_18250) | 46865..47170 | - | 306 | WP_236893520.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| L1P06_RS18255 (L1P06_18255) | 47954..48889 | + | 936 | WP_236893521.1 | Replication protein | - |
| L1P06_RS18260 (L1P06_18260) | 49728..51479 | - | 1752 | Protein_47 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1P06_RS18265 (L1P06_18265) | 51483..51875 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| L1P06_RS18270 (L1P06_18270) | 52013..52897 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| L1P06_RS18275 (L1P06_18275) | 52929..54128 | - | 1200 | WP_035601451.1 | Tetracycline resistance protein, class C | VF |
| L1P06_RS18280 (L1P06_18280) | 54234..54884 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| L1P06_RS18285 (L1P06_18285) | 54916..55158 | - | 243 | WP_000844627.1 | transposase | - |
| L1P06_RS18290 (L1P06_18290) | 55216..58182 | - | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1P06_RS18295 (L1P06_18295) | 58186..58746 | - | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| L1P06_RS18300 (L1P06_18300) | 59056..59400 | + | 345 | Protein_55 | PAS domain-containing protein | - |
| L1P06_RS18305 (L1P06_18305) | 59462..60166 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L1P06_RS18310 (L1P06_18310) | 60501..60893 | + | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| L1P06_RS18315 (L1P06_18315) | 61213..61530 | - | 318 | Protein_58 | bleomycin binding protein | - |
| L1P06_RS18320 (L1P06_18320) | 61585..62289 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L1P06_RS18325 (L1P06_18325) | 62314..63153 | + | 840 | WP_236893597.1 | methyl-accepting chemotaxis protein | - |
| L1P06_RS18330 (L1P06_18330) | 63416..63703 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| L1P06_RS18335 (L1P06_18335) | 63703..63942 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| L1P06_RS18340 (L1P06_18340) | 63967..64272 | + | 306 | WP_001326990.1 | protein YdfV | - |
| L1P06_RS18345 (L1P06_18345) | 64475..64807 | + | 333 | WP_176703002.1 | FlxA-like family protein | - |
| L1P06_RS18350 (L1P06_18350) | 65383..68370 | - | 2988 | WP_034164963.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| L1P06_RS18355 (L1P06_18355) | 68538..69173 | + | 636 | WP_000470624.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| L1P06_RS18360 (L1P06_18360) | 69201..70037 | - | 837 | WP_009652884.1 | S-formylglutathione hydrolase | - |
| L1P06_RS18365 (L1P06_18365) | 70103..70501 | - | 399 | WP_000235177.1 | VOC family protein | - |
| L1P06_RS18370 (L1P06_18370) | 70543..71652 | - | 1110 | WP_000842086.1 | S-(hydroxymethyl)glutathione dehydrogenase | - |
| L1P06_RS18375 (L1P06_18375) | 71683..71958 | - | 276 | WP_001141270.1 | formaldehyde-responsive transcriptional repressor FrmR | - |
| L1P06_RS18380 (L1P06_18380) | 72351..73172 | - | 822 | WP_236893523.1 | hypothetical protein | - |
| L1P06_RS18385 (L1P06_18385) | 73169..73874 | - | 706 | Protein_72 | DNA-binding protein | - |
| L1P06_RS18390 (L1P06_18390) | 74322..74939 | + | 618 | WP_236893524.1 | hypothetical protein | - |
| L1P06_RS18395 (L1P06_18395) | 75067..75693 | + | 627 | WP_236893525.1 | DUF2913 family protein | - |
| L1P06_RS18400 (L1P06_18400) | 75690..76484 | + | 795 | WP_236893526.1 | site-specific integrase | - |
| L1P06_RS18405 (L1P06_18405) | 76693..77334 | + | 642 | WP_236893527.1 | ParA family protein | - |
| L1P06_RS18410 (L1P06_18410) | 77430..77753 | + | 324 | WP_236893528.1 | molecular chaperone GroEL | - |
| L1P06_RS18415 (L1P06_18415) | 77977..79248 | - | 1272 | WP_236893529.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| L1P06_RS18420 (L1P06_18420) | 79248..79673 | - | 426 | WP_236893598.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| L1P06_RS18425 (L1P06_18425) | 79973..80929 | + | 957 | WP_109609982.1 | plasmid segregation protein ParM | - |
| L1P06_RS18430 (L1P06_18430) | 80934..81314 | + | 381 | WP_109609983.1 | plasmid partitioning/stability family protein | - |
| L1P06_RS18435 (L1P06_18435) | 81307..81648 | + | 342 | WP_109609985.1 | hypothetical protein | - |
| L1P06_RS18440 (L1P06_18440) | 81913..82683 | + | 771 | WP_236893530.1 | N-6 DNA methylase | - |
| L1P06_RS18445 (L1P06_18445) | 83249..84160 | + | 912 | WP_236893531.1 | DUF1281 domain-containing protein | - |
| L1P06_RS18450 (L1P06_18450) | 85002..86306 | + | 1305 | WP_109610007.1 | DGQHR domain-containing protein | - |
| L1P06_RS18455 (L1P06_18455) | 86357..87067 | + | 711 | WP_272906425.1 | plasmid SOS inhibition protein A | - |
| L1P06_RS18460 (L1P06_18460) | 87237..87386 | + | 150 | Protein_87 | DUF5431 family protein | - |
| L1P06_RS18465 (L1P06_18465) | 87331..87453 | + | 123 | WP_227016285.1 | type I toxin-antitoxin system Hok family toxin | - |
| L1P06_RS18470 (L1P06_18470) | 87952..88455 | + | 504 | WP_236893536.1 | antirestriction protein | - |
| L1P06_RS18475 (L1P06_18475) | 88509..88805 | + | 297 | WP_109610017.1 | hypothetical protein | - |
| L1P06_RS18480 (L1P06_18480) | 88891..89091 | + | 201 | WP_236893537.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|