MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 113836 bp
Accession: NZ_CP090929 Location: 1673060..1786895 Organism: Salmonella enterica subsp. enterica serovar Agona strain R21.2429 Replicon: chromosome
Accession: NZ_CP090929 Location: 1673060..1786895 Organism: Salmonella enterica subsp. enterica serovar Agona strain R21.2429 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1L24_RS08075 (1669291) | 1669291..1670919 | - | 1629 | WP_000857205.1 | anaerobic glycerol-3-phosphate dehydrogenase subunit A | - |
| L1L24_RS08080 (1671192) | 1671192..1672550 | + | 1359 | WP_000948739.1 | glycerol-3-phosphate transporter | - |
| L1L24_RS08085 (1672555) | 1672555..1673625 | + | 1071 | WP_234969811.1 | glycerophosphodiester phosphodiesterase | - |
| L1L24_RS08090 (1673742) | 1673742..1674620 | - | 879 | WP_000176719.1 | LysR substrate-binding domain-containing protein | - |
| L1L24_RS08095 (1674782) | 1674782..1675972 | + | 1191 | WP_000660249.1 | MFS transporter | - |
| L1L24_RS08100 (1675974) | 1675974..1676228 | - | 255 | WP_000533921.1 | ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein YfaE | - |
| L1L24_RS08105 (1676228) | 1676228..1677358 | - | 1131 | WP_000332026.1 | class Ia ribonucleoside-diphosphate reductase subunit beta | - |
| L1L24_RS08110 (1677471) | 1677471..1679756 | - | 2286 | WP_001076495.1 | class 1a ribonucleoside-diphosphate reductase subunit alpha | - |
| L1L24_RS08115 (1680112) | 1680112..1680840 | - | 729 | WP_001091009.1 | bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | - |
| L1L24_RS08120 (1680923) | 1680923..1681807 | - | 885 | WP_000944714.1 | GntR family transcriptional regulator | - |
| L1L24_RS08125 (1681857) | 1681857..1683182 | + | 1326 | WP_000098081.1 | MFS transporter | - |
| L1L24_RS08130 (1683197) | 1683197..1684399 | + | 1203 | WP_000705581.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| L1L24_RS08135 (1684809) | 1684809..1687445 | + | 2637 | WP_001281271.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
| L1L24_RS08140 (1687563) | 1687563..1690409 | + | 2847 | WP_000876075.1 | two-component system sensor histidine kinase RcsC | - |
| L1L24_RS08145 (1690511) | 1690511..1691161 | - | 651 | WP_001061919.1 | Transcriptional regulatory protein RcsB | VF |
| L1L24_RS08150 (1691178) | 1691178..1693847 | - | 2670 | WP_000083201.1 | phosphotransferase RcsD | - |
| L1L24_RS08155 (1694635) | 1694635..1695339 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L1L24_RS08160 (1695403) | 1695403..1695681 | + | 279 | Protein_1596 | tetracycline resistance MFS efflux pump | - |
| L1L24_RS08165 (1695648) | 1695648..1695836 | - | 189 | Protein_1597 | IS91 family transposase | - |
| L1L24_RS08170 (1695948) | 1695948..1696253 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| L1L24_RS08175 (1696281) | 1696281..1697495 | - | 1215 | WP_065311137.1 | Bicyclomycin resistance protein | ARG |
| L1L24_RS08180 (1697712) | 1697712..1698596 | - | 885 | WP_012728215.1 | DUF3363 domain-containing protein | - |
| L1L24_RS08185 (1698627) | 1698627..1700120 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| L1L24_RS08190 (1700331) | 1700331..1700555 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| L1L24_RS08195 (1700552) | 1700552..1701289 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| L1L24_RS08200 (1701775) | 1701775..1701915 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| L1L24_RS08205 (1701921) | 1701921..1702625 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L1L24_RS08210 (1702892) | 1702892..1703896 | - | 1005 | WP_021546935.1 | IS110 family transposase IS4321R | Transposase |
| L1L24_RS08215 (1704314) | 1704314..1705750 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| L1L24_RS08220 (1706017) | 1706017..1706226 | + | 210 | Protein_1608 | IS6 family transposase IS15DII | Transposase |
| L1L24_RS08225 (1706518) | 1706518..1706766 | + | 249 | WP_234969833.1 | IS6 family transposase IS15DII | Transposase |
| L1L24_RS08230 (1706784) | 1706784..1707125 | - | 342 | WP_004202492.1 | Multiple antibiotic resistance protein MarA | VF |
| L1L24_RS08235 (1707156) | 1707156..1707503 | - | 348 | Protein_1611 | MBL fold metallo-hydrolase | - |
| L1L24_RS08240 (1707681) | 1707681..1707977 | + | 297 | Protein_1612 | helix-turn-helix domain-containing protein | - |
| L1L24_RS08245 (1708816) | 1708816..1708995 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| L1L24_RS08250 (1709382) | 1709382..1711283 | - | 1902 | WP_065311127.1 | AAA family ATPase | - |
| L1L24_RS08255 (1711389) | 1711389..1711898 | - | 510 | WP_065311128.1 | peptidase M14 | - |
| L1L24_RS08260 (1712060) | 1712060..1712878 | - | 819 | Protein_1616 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| L1L24_RS08265 (1712939) | 1712939..1713643 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L1L24_RS08270 (1713819) | 1713819..1714634 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| L1L24_RS08275 (1714928) | 1714928..1715632 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| L1L24_RS08280 (1715623) | 1715623..1715979 | + | 357 | WP_065311124.1 | H-NS family nucleoid-associated regulatory protein | - |
| L1L24_RS08285 (1716321) | 1716321..1716524 | - | 204 | WP_001194555.1 | hypothetical protein | - |
| L1L24_RS08290 (1716586) | 1716586..1717443 | - | 858 | WP_000784387.1 | HNH endonuclease signature motif containing protein | - |
| L1L24_RS08295 (1717459) | 1717459..1717767 | - | 309 | WP_001224687.1 | hypothetical protein | - |
| L1L24_RS08300 (1718316) | 1718316..1718741 | - | 426 | WP_001043843.1 | hypothetical protein | - |
| L1L24_RS08305 (1718995) | 1718995..1719810 | - | 816 | WP_001572439.1 | HNH endonuclease signature motif containing protein | - |
| L1L24_RS08310 (1719823) | 1719823..1720233 | - | 411 | WP_000985911.1 | hypothetical protein | - |
| L1L24_RS08315 (1720335) | 1720335..1720541 | - | 207 | WP_000134171.1 | hypothetical protein | - |
| L1L24_RS08320 (1720602) | 1720602..1721927 | - | 1326 | WP_000088046.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| L1L24_RS08325 (1721932) | 1721932..1722225 | - | 294 | WP_024136327.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| L1L24_RS08330 (1722829) | 1722829..1723221 | - | 393 | WP_000341066.1 | hypothetical protein | - |
| L1L24_RS08335 (1723594) | 1723594..1723929 | + | 336 | WP_065311125.1 | hypothetical protein | - |
| L1L24_RS08340 (1723968) | 1723968..1724765 | - | 798 | WP_000544828.1 | IS21 family transposase IS21 | Transposase |
| L1L24_RS08345 (1724765) | 1724765..1725937 | - | 1173 | WP_000952349.1 | IS21 family transposase IS21 | Transposase |
| L1L24_RS08350 (1725978) | 1725978..1726475 | + | 498 | WP_133322300.1 | hypothetical protein | - |
| L1L24_RS08355 (1726883) | 1726883..1727260 | + | 378 | WP_000853477.1 | hypothetical protein | - |
| L1L24_RS08360 (1727355) | 1727355..1727783 | + | 429 | WP_001133498.1 | hypothetical protein | - |
| L1L24_RS08365 (1727848) | 1727848..1728105 | + | 258 | WP_001290637.1 | hypothetical protein | - |
| L1L24_RS08370 (1728261) | 1728261..1728869 | + | 609 | WP_000833773.1 | hypothetical protein | - |
| L1L24_RS08375 (1729038) | 1729038..1730288 | + | 1251 | WP_000104323.1 | site-specific DNA-methyltransferase | - |
| L1L24_RS08380 (1730569) | 1730569..1730715 | + | 147 | WP_001426334.1 | hypothetical protein | - |
| L1L24_RS08385 (1731131) | 1731131..1731457 | + | 327 | WP_000556022.1 | hypothetical protein | - |
| L1L24_RS08390 (1731523) | 1731523..1731780 | + | 258 | WP_042634392.1 | hypothetical protein | - |
| L1L24_RS08395 (1732007) | 1732007..1732798 | + | 792 | WP_000774870.1 | hypothetical protein | - |
| L1L24_RS08400 (1732850) | 1732850..1733299 | + | 450 | WP_000182314.1 | hypothetical protein | - |
| L1L24_RS08405 (1733472) | 1733472..1735856 | + | 2385 | WP_000469466.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| L1L24_RS08410 (1736106) | 1736106..1736345 | + | 240 | WP_001180999.1 | hypothetical protein | - |
| L1L24_RS08415 (1736408) | 1736408..1736719 | + | 312 | WP_000172889.1 | hypothetical protein | - |
| L1L24_RS08420 (1736716) | 1736716..1736904 | + | 189 | WP_000159618.1 | hypothetical protein | - |
| L1L24_RS08425 (1736965) | 1736965..1737498 | + | 534 | WP_000241454.1 | HNH endonuclease signature motif containing protein | - |
| L1L24_RS08430 (1737610) | 1737610..1738221 | + | 612 | WP_077248242.1 | DUF6012 family protein | - |
| L1L24_RS08435 (1738449) | 1738449..1738676 | + | 228 | WP_000276410.1 | hypothetical protein | - |
| L1L24_RS08440 (1738856) | 1738856..1739176 | + | 321 | WP_001133831.1 | hypothetical protein | - |
| L1L24_RS08445 (1739692) | 1739692..1740003 | + | 312 | WP_001165367.1 | DUF957 domain-containing protein | - |
| L1L24_RS08450 (1740008) | 1740008..1740499 | + | 492 | WP_001424592.1 | DUF3085 domain-containing protein | - |
| L1L24_RS08455 (1741052) | 1741052..1741255 | + | 204 | WP_000781545.1 | hypothetical protein | - |
| L1L24_RS08460 (1741310) | 1741310..1741534 | + | 225 | WP_000551490.1 | hypothetical protein | - |
| L1L24_RS08465 (1741574) | 1741574..1741774 | + | 201 | WP_000814954.1 | hypothetical protein | - |
| L1L24_RS08470 (1742012) | 1742012..1742308 | + | 297 | WP_001011159.1 | hypothetical protein | - |
| L1L24_RS08475 (1742683) | 1742683..1742964 | + | 282 | WP_000703843.1 | hypothetical protein | - |
| L1L24_RS08480 (1743180) | 1743180..1743785 | + | 606 | WP_000137793.1 | hypothetical protein | - |
| L1L24_RS08485 (1744118) | 1744118..1745487 | + | 1370 | WP_087522250.1 | IS3 family transposase IS150 | Transposase |
| L1L24_RS08490 (1745567) | 1745567..1745677 | + | 111 | Protein_1662 | FlmC family protein | - |
| L1L24_RS08495 (1745625) | 1745625..1745744 | + | 120 | WP_223165953.1 | type I toxin-antitoxin system Hok family toxin | - |
| L1L24_RS08500 (1746163) | 1746163..1746366 | - | 204 | WP_001015182.1 | hypothetical protein | - |
| L1L24_RS08505 (1746412) | 1746412..1746762 | - | 351 | WP_000743060.1 | hypothetical protein | - |
| L1L24_RS08510 (1746822) | 1746822..1747424 | - | 603 | WP_225741097.1 | hypothetical protein | - |
| L1L24_RS08515 (1747521) | 1747521..1748465 | - | 945 | WP_000778030.1 | DUF5417 domain-containing protein | - |
| L1L24_RS08520 (1748975) | 1748975..1749151 | + | 177 | WP_001371930.1 | hypothetical protein | - |
| L1L24_RS08525 (1749567) | 1749567..1750751 | + | 1185 | WP_001272970.1 | hypothetical protein | - |
| L1L24_RS08530 (1750817) | 1750817..1751098 | + | 282 | WP_000710431.1 | hypothetical protein | - |
| L1L24_RS08535 (1751283) | 1751283..1751561 | + | 279 | WP_000953953.1 | hypothetical protein | - |
| L1L24_RS08540 (1751682) | 1751682..1751978 | + | 297 | WP_000744346.1 | hypothetical protein | - |
| L1L24_RS08545 (1752023) | 1752023..1752460 | + | 438 | WP_000286107.1 | hypothetical protein | - |
| L1L24_RS08550 (1752528) | 1752528..1753064 | + | 537 | WP_000800252.1 | hypothetical protein | - |
| L1L24_RS08555 (1753229) | 1753229..1753597 | + | 369 | WP_000537761.1 | hypothetical protein | - |
| L1L24_RS08560 (1754030) | 1754030..1754332 | + | 303 | WP_000442694.1 | hypothetical protein | - |
| L1L24_RS08565 (1754689) | 1754689..1754973 | + | 285 | WP_001032029.1 | hypothetical protein | - |
| L1L24_RS08570 (1755039) | 1755039..1755392 | + | 354 | WP_000210769.1 | hypothetical protein | - |
| L1L24_RS08575 (1755679) | 1755679..1756410 | - | 732 | WP_000338612.1 | nuclease-related domain-containing protein | - |
| L1L24_RS08580 (1756412) | 1756412..1757593 | - | 1182 | WP_000952983.1 | S49 family peptidase | - |
| L1L24_RS08585 (1757604) | 1757604..1758266 | - | 663 | WP_000718549.1 | DUF4400 domain-containing protein | - |
| L1L24_RS08590 (1758253) | 1758253..1759362 | - | 1110 | WP_000343599.1 | hypothetical protein | - |
| L1L24_RS08595 (1759362) | 1759362..1761446 | - | 2085 | WP_001284076.1 | conjugative transfer system coupling protein TraD | - |
| L1L24_RS08600 (1761446) | 1761446..1764598 | - | 3153 | WP_000980119.1 | MobH family relaxase | - |
| L1L24_RS08605 (1764602) | 1764602..1765339 | - | 738 | WP_000128631.1 | hypothetical protein | - |
| L1L24_RS08610 (1765336) | 1765336..1765821 | - | 486 | WP_000071885.1 | conjugative transfer protein MobI(A/C) | - |
| L1L24_RS08615 (1766580) | 1766580..1767380 | + | 801 | WP_000004209.1 | hypothetical protein | - |
| L1L24_RS08620 (1767382) | 1767382..1767894 | + | 513 | WP_001140953.1 | hypothetical protein | - |
| L1L24_RS08625 (1768488) | 1768488..1769534 | + | 1047 | WP_000196728.1 | thioredoxin family protein | - |
| L1L24_RS08630 (1769524) | 1769524..1770939 | + | 1416 | WP_001257292.1 | IncHI-type conjugal transfer protein TrhH | - |
| L1L24_RS08635 (1770948) | 1770948..1774901 | + | 3954 | WP_000386159.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| L1L24_RS08640 (1775082) | 1775082..1776371 | + | 1290 | WP_001284752.1 | HNH endonuclease signature motif containing protein | - |
| L1L24_RS08645 (1776479) | 1776479..1777045 | - | 567 | WP_024136329.1 | HAD domain-containing protein | - |
| L1L24_RS08650 (1777128) | 1777128..1777667 | - | 540 | WP_000494967.1 | hypothetical protein | VF |
| L1L24_RS08655 (1777815) | 1777815..1778564 | + | 750 | WP_000720274.1 | thioredoxin fold domain-containing protein | - |
| L1L24_RS08660 (1778589) | 1778589..1778981 | + | 393 | WP_000843244.1 | hypothetical protein | - |
| L1L24_RS08665 (1779177) | 1779177..1779437 | + | 261 | WP_001424629.1 | hypothetical protein | - |
| L1L24_RS08670 (1779497) | 1779497..1779844 | - | 348 | WP_001684081.1 | hypothetical protein | - |
| L1L24_RS08675 (1780215) | 1780215..1781024 | + | 810 | WP_000031377.1 | DsbA family protein | - |
| L1L24_RS08680 (1781070) | 1781070..1782329 | - | 1260 | WP_042634445.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| L1L24_RS08685 (1782313) | 1782313..1782747 | - | 435 | WP_000111290.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| L1L24_RS08690 (1782941) | 1782941..1783558 | + | 618 | WP_001130842.1 | hypothetical protein | - |
| L1L24_RS08695 (1783708) | 1783708..1784064 | + | 357 | WP_000770127.1 | hypothetical protein | - |
| L1L24_RS08700 (1784315) | 1784315..1784485 | + | 171 | WP_152919720.1 | hypothetical protein | - |
| L1L24_RS08705 (1784522) | 1784522..1785226 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| L1L24_RS08710 (1785280) | 1785280..1785723 | - | 444 | Protein_1706 | IS91 family transposase ISAzo26 | Transposase |
| L1L24_RS08715 (1785879) | 1785879..1786352 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| L1L24_RS08720 (1786463) | 1786463..1786915 | + | 453 | WP_000237816.1 | NAD(+)--rifampin ADP-ribosyltransferase Arr-2 | - |
| L1L24_RS08725 (1787236) | 1787236..1787529 | + | 294 | Protein_1709 | MFS transporter | - |
| L1L24_RS08730 (1787592) | 1787592..1788296 | + | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| L1L24_RS08735 (1788403) | 1788403..1788993 | + | 591 | WP_012477564.1 | plasmid pRiA4b ORF-3 family protein | - |
| L1L24_RS08740 (1789130) | 1789130..1789702 | + | 573 | WP_001493762.1 | recombinase family protein | - |
| L1L24_RS08745 (1789739) | 1789739..1791130 | + | 1392 | WP_001493761.1 | ISKra4-like element ISKpn19 family transposase | - |
| L1L24_RS08750 (1791163) | 1791163..1791591 | + | 429 | Protein_1714 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|