MGE detailed information
MGE type: Prophage MGE length: 82924 bp
Accession: NZ_CP090915 Location: 1941993..2024916 Organism: Staphylococcus epidermidis strain 45A5 Replicon: chromosome
Accession: NZ_CP090915 Location: 1941993..2024916 Organism: Staphylococcus epidermidis strain 45A5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KB229_RS09205 (KB229_09205) | 1937192..1937338 | - | 147 | WP_001831913.1 | teichoic acid D-Ala incorporation-associated protein DltX | - |
| KB229_RS09210 (KB229_09210) | 1937743..1938714 | - | 972 | WP_234965911.1 | D-glycerate dehydrogenase | - |
| KB229_RS09215 (KB229_09215) | 1938756..1939535 | - | 780 | WP_070856349.1 | TIGR01457 family HAD-type hydrolase | - |
| KB229_RS09220 (KB229_09220) | 1939535..1939969 | - | 435 | WP_001831932.1 | DUF86 domain-containing protein | - |
| KB229_RS09225 (KB229_09225) | 1940088..1940354 | + | 267 | WP_002439025.1 | DUF3055 domain-containing protein | - |
| KB229_RS09230 (KB229_09230) | 1940414..1940803 | - | 390 | WP_001831895.1 | DUF1027 domain-containing protein | - |
| KB229_RS09235 (KB229_09235) | 1940990..1941904 | - | 915 | WP_001831979.1 | lipoyl synthase | - |
| KB229_RS09240 (KB229_09240) | 1941993..1943312 | - | 1320 | WP_001831906.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| KB229_RS09245 (KB229_09245) | 1943398..1944225 | - | 828 | WP_001831948.1 | sulfite exporter TauE/SafE family protein | - |
| KB229_RS09250 (KB229_09250) | 1944238..1945086 | - | 849 | WP_001831962.1 | DUF72 domain-containing protein | - |
| KB229_RS09255 (KB229_09255) | 1945453..1946478 | - | 1026 | WP_001831928.1 | CNNM domain-containing protein | - |
| KB229_RS09260 (KB229_09260) | 1946981..1947334 | - | 354 | WP_002495357.1 | hypothetical protein | - |
| KB229_RS09265 (KB229_09265) | 1947325..1947471 | - | 147 | WP_001831994.1 | hypothetical protein | - |
| KB229_RS09270 (KB229_09270) | 1948134..1948313 | - | 180 | WP_002468147.1 | hypothetical protein | - |
| KB229_RS09275 (KB229_09275) | 1949313..1950776 | - | 1464 | WP_234965912.1 | SH3 domain-containing protein | - |
| KB229_RS09280 (KB229_09280) | 1950751..1951161 | - | 411 | WP_145397314.1 | phage holin | - |
| KB229_RS09285 (KB229_09285) | 1951224..1951622 | - | 399 | WP_145397316.1 | YxeA family protein | - |
| KB229_RS09290 (KB229_09290) | 1951780..1952187 | - | 408 | WP_162157783.1 | hypothetical protein | - |
| KB229_RS09295 (KB229_09295) | 1952174..1952599 | - | 426 | WP_002497615.1 | hypothetical protein | - |
| KB229_RS09300 (KB229_09300) | 1952596..1953219 | - | 624 | WP_063280535.1 | poly-gamma-glutamate hydrolase family protein | - |
| KB229_RS09305 (KB229_09305) | 1953224..1954438 | - | 1215 | WP_162157785.1 | BppU family phage baseplate upper protein | - |
| KB229_RS09310 (KB229_09310) | 1954438..1956299 | - | 1862 | Protein_1807 | M14 family metallopeptidase | - |
| KB229_RS09315 (KB229_09315) | 1956315..1956488 | - | 174 | WP_002453517.1 | hypothetical protein | - |
| KB229_RS09320 (KB229_09320) | 1956481..1958040 | - | 1560 | WP_002488935.1 | prophage endopeptidase tail family protein | - |
| KB229_RS09325 (KB229_09325) | 1958050..1958868 | - | 819 | WP_234966581.1 | phage tail family protein | - |
| KB229_RS09330 (KB229_09330) | 1958884..1963362 | - | 4479 | WP_234965913.1 | tape measure protein | - |
| KB229_RS09335 (KB229_09335) | 1963391..1963543 | - | 153 | WP_002503474.1 | hypothetical protein | - |
| KB229_RS09340 (KB229_09340) | 1963576..1963938 | - | 363 | WP_234965914.1 | hypothetical protein | - |
| KB229_RS09345 (KB229_09345) | 1964002..1964187 | - | 186 | WP_002484762.1 | hypothetical protein | - |
| KB229_RS09350 (KB229_09350) | 1964206..1964838 | - | 633 | WP_234965915.1 | phage tail protein | - |
| KB229_RS09355 (KB229_09355) | 1964851..1965255 | - | 405 | WP_002468129.1 | hypothetical protein | - |
| KB229_RS09360 (KB229_09360) | 1965260..1965664 | - | 405 | WP_002468130.1 | hypothetical protein | - |
| KB229_RS09365 (KB229_09365) | 1965661..1965990 | - | 330 | WP_234965916.1 | hypothetical protein | - |
| KB229_RS09370 (KB229_09370) | 1965980..1966321 | - | 342 | WP_145397336.1 | head-tail connector protein | - |
| KB229_RS09375 (KB229_09375) | 1966340..1967692 | - | 1353 | WP_145397338.1 | phage major capsid protein | - |
| KB229_RS09380 (KB229_09380) | 1967732..1968289 | - | 558 | WP_162157792.1 | HK97 family phage prohead protease | - |
| KB229_RS09385 (KB229_09385) | 1968279..1969511 | - | 1233 | WP_162157793.1 | phage portal protein | - |
| KB229_RS09390 (KB229_09390) | 1969514..1969711 | - | 198 | WP_002468125.1 | hypothetical protein | - |
| KB229_RS09395 (KB229_09395) | 1969720..1971471 | - | 1752 | WP_002468181.1 | terminase large subunit | - |
| KB229_RS09400 (KB229_09400) | 1971464..1971691 | - | 228 | WP_234966582.1 | hypothetical protein | - |
| KB229_RS09405 (KB229_09405) | 1971749..1971934 | - | 186 | WP_234965918.1 | hypothetical protein | - |
| KB229_RS09410 (KB229_09410) | 1972077..1972427 | - | 351 | WP_234965920.1 | HNH endonuclease signature motif containing protein | - |
| KB229_RS09415 (KB229_09415) | 1973018..1973464 | - | 447 | WP_162157796.1 | transcriptional regulator | - |
| KB229_RS09420 (KB229_09420) | 1973631..1973813 | - | 183 | WP_162157798.1 | regulator | - |
| KB229_RS09425 (KB229_09425) | 1973921..1974223 | + | 303 | WP_002498306.1 | hypothetical protein | - |
| KB229_RS09430 (KB229_09430) | 1974343..1974765 | - | 423 | WP_002468111.1 | dUTP diphosphatase | - |
| KB229_RS09435 (KB229_09435) | 1974822..1975139 | + | 318 | WP_224479694.1 | hypothetical protein | - |
| KB229_RS09440 (KB229_09440) | 1975157..1975357 | - | 201 | WP_002468135.1 | hypothetical protein | - |
| KB229_RS09445 (KB229_09445) | 1975347..1975799 | - | 453 | WP_002468121.1 | DUF3310 domain-containing protein | - |
| KB229_RS09450 (KB229_09450) | 1975796..1976155 | - | 360 | WP_162157801.1 | SA1788 family PVL leukocidin-associated protein | - |
| KB229_RS09455 (KB229_09455) | 1976156..1976353 | - | 198 | WP_234965922.1 | transcriptional regulator | - |
| KB229_RS09460 (KB229_09460) | 1976354..1976761 | - | 408 | WP_002468165.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KB229_RS09465 (KB229_09465) | 1976770..1977015 | - | 246 | WP_002498310.1 | hypothetical protein | - |
| KB229_RS09470 (KB229_09470) | 1976993..1977214 | - | 222 | WP_070858718.1 | hypothetical protein | - |
| KB229_RS09475 (KB229_09475) | 1977211..1978458 | - | 1248 | WP_162157803.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| KB229_RS09480 (KB229_09480) | 1978448..1978801 | - | 354 | WP_002456374.1 | hypothetical protein | - |
| KB229_RS09485 (KB229_09485) | 1978807..1979508 | - | 702 | WP_162157804.1 | helix-turn-helix domain-containing protein | - |
| KB229_RS09490 (KB229_09490) | 1979660..1980331 | - | 672 | WP_162157805.1 | putative HNHc nuclease | - |
| KB229_RS09495 (KB229_09495) | 1980343..1980897 | - | 555 | WP_234965924.1 | single-stranded DNA-binding protein | - |
| KB229_RS09500 (KB229_09500) | 1980926..1981702 | - | 777 | WP_002468156.1 | ATP-binding protein | - |
| KB229_RS09505 (KB229_09505) | 1981703..1982188 | - | 486 | WP_002468176.1 | siphovirus Gp157 family protein | - |
| KB229_RS09510 (KB229_09510) | 1982172..1982435 | - | 264 | WP_002468154.1 | hypothetical protein | - |
| KB229_RS09515 (KB229_09515) | 1982501..1982683 | - | 183 | WP_002498317.1 | hypothetical protein | - |
| KB229_RS09520 (KB229_09520) | 1982680..1982895 | - | 216 | WP_002468180.1 | hypothetical protein | - |
| KB229_RS09525 (KB229_09525) | 1983004..1983207 | + | 204 | WP_002468183.1 | hypothetical protein | - |
| KB229_RS09530 (KB229_09530) | 1983316..1983546 | - | 231 | WP_234966583.1 | ORF6C domain-containing protein | - |
| KB229_RS09535 (KB229_09535) | 1983607..1983804 | - | 198 | WP_234965926.1 | hypothetical protein | - |
| KB229_RS09540 (KB229_09540) | 1983905..1984081 | - | 177 | WP_002468145.1 | hypothetical protein | - |
| KB229_RS09545 (KB229_09545) | 1984092..1985009 | - | 918 | WP_234965928.1 | hypothetical protein | - |
| KB229_RS09550 (KB229_09550) | 1985045..1985263 | - | 219 | WP_162157808.1 | helix-turn-helix transcriptional regulator | - |
| KB229_RS09555 (KB229_09555) | 1985454..1985783 | + | 330 | WP_162157809.1 | helix-turn-helix transcriptional regulator | - |
| KB229_RS09560 (KB229_09560) | 1985796..1986257 | + | 462 | WP_162157810.1 | ImmA/IrrE family metallo-endopeptidase | - |
| KB229_RS09565 (KB229_09565) | 1986275..1986814 | + | 540 | Protein_1858 | hypothetical protein | - |
| KB229_RS09570 (KB229_09570) | 1987000..1988049 | + | 1050 | WP_162157812.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KB229_RS09575 (KB229_09575) | 1988117..1989514 | - | 1398 | WP_002498327.1 | Fe-S cluster assembly protein SufB | - |
| KB229_RS09580 (KB229_09580) | 1989720..1990184 | - | 465 | WP_001831954.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| KB229_RS09585 (KB229_09585) | 1990174..1991415 | - | 1242 | WP_234965930.1 | cysteine desulfurase | - |
| KB229_RS09590 (KB229_09590) | 1991483..1992790 | - | 1308 | WP_234965932.1 | Fe-S cluster assembly protein SufD | - |
| KB229_RS09595 (KB229_09595) | 1992885..1993646 | - | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
| KB229_RS09600 (KB229_09600) | 1993968..1994828 | + | 861 | WP_001831939.1 | DUF368 domain-containing protein | - |
| KB229_RS09605 (KB229_09605) | 1994894..1995085 | - | 192 | WP_001831967.1 | CsbD family protein | - |
| KB229_RS09610 (KB229_09610) | 1995260..1995418 | + | 159 | WP_001831893.1 | hypothetical protein | - |
| KB229_RS09615 (KB229_09615) | 1995688..1996500 | - | 813 | WP_002438990.1 | hypothetical protein | VF |
| KB229_RS09620 (KB229_09620) | 1996521..1997216 | - | 696 | WP_001831910.1 | methionine ABC transporter permease | - |
| KB229_RS09625 (KB229_09625) | 1997209..1998234 | - | 1026 | WP_001831992.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| KB229_RS09630 (KB229_09630) | 1998487..1998783 | - | 297 | WP_001831936.1 | thioredoxin family protein | - |
| KB229_RS09635 (KB229_09635) | 1998776..1999162 | - | 387 | WP_001831968.1 | toprim domain-containing protein | - |
| KB229_RS09640 (KB229_09640) | 1999422..1999802 | - | 381 | WP_002438979.1 | glycine cleavage system protein GcvH | - |
| KB229_RS09645 (KB229_09645) | 1999976..2000329 | - | 354 | WP_001831965.1 | arsenate reductase family protein | - |
| KB229_RS09650 (KB229_09650) | 2000472..2000795 | + | 324 | WP_001831907.1 | thioredoxin family protein | - |
| KB229_RS09655 (KB229_09655) | 2000978..2001520 | - | 543 | WP_001831981.1 | nitroreductase | - |
| KB229_RS09660 (KB229_09660) | 2001601..2002317 | - | 717 | WP_001831974.1 | type I 3-dehydroquinate dehydratase | - |
| KB229_RS09665 (KB229_09665) | 2002478..2002900 | + | 423 | WP_002457221.1 | organic hydroperoxide resistance protein | - |
| KB229_RS09670 (KB229_09670) | 2003084..2003221 | - | 138 | WP_162161215.1 | IS1182 family transposase IS1272 | Transposase |
| KB229_RS09675 (KB229_09675) | 2003251..2003438 | - | 188 | Protein_1880 | hypothetical protein | - |
| KB229_RS09680 (KB229_09680) | 2003825..2004325 | + | 501 | WP_001829623.1 | GNAT family N-acetyltransferase | - |
| KB229_RS09685 (KB229_09685) | 2004596..2005183 | - | 588 | WP_001829615.1 | histidine phosphatase family protein | - |
| KB229_RS09690 (KB229_09690) | 2005397..2005633 | + | 237 | WP_002457224.1 | hypothetical protein | - |
| KB229_RS09695 (KB229_09695) | 2005625..2005828 | - | 204 | WP_002438966.1 | sterile alpha motif-like domain-containing protein | - |
| KB229_RS09700 (KB229_09700) | 2006237..2006494 | + | 258 | WP_002438963.1 | hypothetical protein | Antitoxin Detail |
| KB229_RS09705 (KB229_09705) | 2006519..2006707 | + | 189 | WP_001829569.1 | hypothetical protein | Toxin Detail |
| KB229_RS09710 (KB229_09710) | 2006897..2007451 | + | 555 | WP_001829566.1 | lipoprotein N-acylation protein LnsA | - |
| KB229_RS09715 (KB229_09715) | 2007511..2007744 | - | 234 | WP_234965934.1 | hypothetical protein | - |
| KB229_RS09720 (KB229_09720) | 2008028..2008774 | + | 747 | WP_234965936.1 | poly-gamma-glutamate hydrolase family protein | - |
| KB229_RS09725 (KB229_09725) | 2008873..2009157 | + | 285 | WP_001829635.1 | hypothetical protein | - |
| KB229_RS09730 (KB229_09730) | 2009181..2009405 | + | 225 | WP_001829613.1 | hypothetical protein | - |
| KB229_RS09735 (KB229_09735) | 2010026..2010226 | - | 201 | WP_001829681.1 | cold-shock protein | - |
| KB229_RS09740 (KB229_09740) | 2011592..2012533 | - | 942 | WP_001829688.1 | cation diffusion facilitator family transporter | - |
| KB229_RS09745 (KB229_09745) | 2012820..2013323 | + | 504 | WP_002438954.1 | DUF1440 domain-containing protein | - |
| KB229_RS09750 (KB229_09750) | 2014817..2015233 | + | 417 | WP_002489835.1 | glyoxalase | - |
| KB229_RS09755 (KB229_09755) | 2015453..2015797 | - | 345 | WP_234965938.1 | DUF4260 domain-containing protein | - |
| KB229_RS09760 (KB229_09760) | 2016024..2017331 | + | 1308 | WP_001832616.1 | potassium transporter TrkG | - |
| KB229_RS09765 (KB229_09765) | 2017944..2018177 | + | 234 | WP_001829658.1 | hypothetical protein | - |
| KB229_RS09770 (KB229_09770) | 2018435..2018605 | - | 171 | WP_001829642.1 | hypothetical protein | - |
| KB229_RS09775 (KB229_09775) | 2019340..2019882 | + | 543 | WP_001832592.1 | hypothetical protein | - |
| KB229_RS09780 (KB229_09780) | 2020026..2020205 | - | 180 | WP_001829655.1 | hypothetical protein | - |
| KB229_RS09785 (KB229_09785) | 2020346..2020804 | + | 459 | WP_234966584.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| KB229_RS09790 (KB229_09790) | 2020817..2021491 | + | 675 | WP_001829583.1 | hypothetical protein | - |
| KB229_RS09800 (KB229_09800) | 2022043..2022513 | - | 471 | WP_001829588.1 | SsrA-binding protein SmpB | - |
| KB229_RS09805 (KB229_09805) | 2022538..2024916 | - | 2379 | WP_001829677.1 | ribonuclease R | - |
| KB229_RS09810 (KB229_09810) | 2024951..2025691 | - | 741 | WP_001829672.1 | carboxylesterase | - |
| KB229_RS09815 (KB229_09815) | 2025992..2026225 | - | 234 | WP_001829669.1 | preprotein translocase subunit SecG | - |
| KB229_RS09820 (KB229_09820) | 2026294..2026752 | - | 459 | WP_001829646.1 | hypothetical protein | - |
| KB229_RS09825 (KB229_09825) | 2026918..2028222 | - | 1305 | WP_001829595.1 | phosphopyruvate hydratase | - |
| KB229_RS09830 (KB229_09830) | 2028361..2029878 | - | 1518 | WP_001829591.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|