MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 69543 bp
Accession: NZ_CP090908 Location: 4408654..4478196 Organism: Serratia marcescens strain Sys06 Replicon: chromosome
Accession: NZ_CP090908 Location: 4408654..4478196 Organism: Serratia marcescens strain Sys06 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L1F17_RS21385 (L1F17_21385) | 4405091..4406608 | - | 1518 | WP_004931697.1 | lysine--tRNA ligase | - |
| L1F17_RS21395 (L1F17_21395) | 4407883..4409616 | - | 1734 | WP_033632176.1 | single-stranded-DNA-specific exonuclease RecJ | - |
| L1F17_RS21400 (L1F17_21400) | 4409623..4410339 | - | 717 | WP_033632175.1 | bifunctional protein-disulfide isomerase/oxidoreductase DsbC | - |
| L1F17_RS21405 (L1F17_21405) | 4410366..4411265 | - | 900 | WP_004931685.1 | IS91 family transposase ISAzo26 | Transposase |
| L1F17_RS21410 (L1F17_21410) | 4411372..4411890 | + | 519 | WP_004931683.1 | flavodoxin FldB | - |
| L1F17_RS21415 (L1F17_21415) | 4411925..4413289 | - | 1365 | WP_060560181.1 | cell envelope integrity protein CreD | - |
| L1F17_RS21420 (L1F17_21420) | 4413370..4414788 | - | 1419 | WP_033632173.1 | two-component system sensor histidine kinase CreC | - |
| L1F17_RS21425 (L1F17_21425) | 4414785..4415480 | - | 696 | WP_033632172.1 | Transcriptional regulatory protein CreB | VF |
| L1F17_RS21430 (L1F17_21430) | 4415480..4415902 | - | 423 | WP_033632171.1 | protein YgfX | Toxin Detail |
| L1F17_RS21435 (L1F17_21435) | 4415883..4416149 | - | 267 | WP_004931679.1 | FAD assembly factor SdhE | Antitoxin Detail |
| L1F17_RS21440 (L1F17_21440) | 4416471..4417463 | + | 993 | WP_033632169.1 | tRNA-modifying protein YgfZ | - |
| L1F17_RS21445 (L1F17_21445) | 4417502..4417999 | - | 498 | WP_004931675.1 | DUF2165 domain-containing protein | - |
| L1F17_RS21450 (L1F17_21450) | 4418150..4418824 | - | 675 | WP_033632168.1 | hypothetical protein | VF |
| L1F17_RS21455 (L1F17_21455) | 4419008..4419616 | + | 609 | WP_033632167.1 | HD domain-containing protein | - |
| L1F17_RS21460 (L1F17_21460) | 4419657..4420583 | - | 927 | WP_015378971.1 | ribokinase | - |
| L1F17_RS21465 (L1F17_21465) | 4420580..4421488 | - | 909 | WP_060560183.1 | allose kinase | - |
| L1F17_RS21470 (L1F17_21470) | 4421499..4422170 | - | 672 | WP_033632165.1 | D-allulose-6-phosphate 3-epimerase | VF |
| L1F17_RS21475 (L1F17_21475) | 4422202..4423236 | - | 1035 | WP_004931662.1 | ABC transporter permease | - |
| L1F17_RS21480 (L1F17_21480) | 4423247..4424233 | - | 987 | WP_004931660.1 | ABC transporter permease | - |
| L1F17_RS21485 (L1F17_21485) | 4424226..4425743 | - | 1518 | WP_060560185.1 | Ribose import ATP-binding protein RbsA | VF |
| L1F17_RS21490 (L1F17_21490) | 4425746..4426729 | - | 984 | WP_060560186.1 | substrate-binding domain-containing protein | - |
| L1F17_RS21495 (L1F17_21495) | 4426777..4427595 | - | 819 | WP_033632161.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| L1F17_RS21500 (L1F17_21500) | 4427977..4428294 | - | 318 | WP_004931651.1 | BrnA antitoxin family protein | - |
| L1F17_RS21505 (L1F17_21505) | 4428257..4428580 | - | 324 | Protein_4192 | BrnT family toxin | - |
| L1F17_RS21510 (L1F17_21510) | 4428658..4429404 | - | 747 | WP_060560189.1 | putative oxidoreductase YgfF | VF |
| L1F17_RS21515 (L1F17_21515) | 4429501..4429734 | - | 234 | WP_033632158.1 | hypothetical protein | - |
| L1F17_RS21520 (L1F17_21520) | 4429924..4430583 | + | 660 | WP_004931642.1 | response regulator | - |
| L1F17_RS21525 (L1F17_21525) | 4430588..4431994 | + | 1407 | WP_060560193.1 | ATP-binding protein | - |
| L1F17_RS21530 (L1F17_21530) | 4432006..4432533 | + | 528 | WP_049240107.1 | GNAT family N-acetyltransferase | - |
| L1F17_RS21535 (L1F17_21535) | 4432544..4433509 | - | 966 | WP_060560195.1 | Alcohol dehydrogenase | VF |
| L1F17_RS21540 (L1F17_21540) | 4433618..4436497 | - | 2880 | WP_033632155.1 | aminomethyl-transferring glycine dehydrogenase | - |
| L1F17_RS21545 (L1F17_21545) | 4436590..4436976 | - | 387 | WP_033632154.1 | glycine cleavage system protein GcvH | - |
| L1F17_RS21550 (L1F17_21550) | 4437023..4438120 | - | 1098 | WP_004931631.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| L1F17_RS21555 (L1F17_21555) | 4438627..4439829 | - | 1203 | WP_033632153.1 | FAD-dependent 2-octaprenylphenol hydroxylase | - |
| L1F17_RS21560 (L1F17_21560) | 4439911..4441089 | - | 1179 | WP_033632151.1 | 2-octaprenyl-6-methoxyphenyl hydroxylase | - |
| L1F17_RS21565 (L1F17_21565) | 4441091..4442407 | - | 1317 | WP_060560196.1 | Xaa-Pro aminopeptidase | - |
| L1F17_RS21570 (L1F17_21570) | 4442463..4443041 | - | 579 | WP_004931622.1 | YecA family protein | - |
| L1F17_RS21575 (L1F17_21575) | 4443361..4443690 | + | 330 | WP_004931621.1 | cell division protein ZapA | - |
| L1F17_RS21585 (L1F17_21585) | 4443966..4444574 | + | 609 | WP_060560197.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| L1F17_RS21590 (L1F17_21590) | 4444623..4445861 | - | 1239 | WP_004931617.1 | phosphoglycerate dehydrogenase | - |
| L1F17_RS21595 (L1F17_21595) | 4446154..4446810 | - | 657 | WP_004931614.1 | ribose-5-phosphate isomerase RpiA | - |
| L1F17_RS21600 (L1F17_21600) | 4447015..4447908 | + | 894 | WP_004931613.1 | LysR family transcriptional regulator ArgP | - |
| L1F17_RS21605 (L1F17_21605) | 4447957..4448688 | - | 732 | WP_004931607.1 | oxidative stress defense protein | - |
| L1F17_RS21610 (L1F17_21610) | 4448810..4449427 | - | 618 | WP_060560198.1 | arginine exporter ArgO | - |
| L1F17_RS21615 (L1F17_21615) | 4449638..4450336 | + | 699 | WP_049277087.1 | RluA family pseudouridine synthase | - |
| L1F17_RS21620 (L1F17_21620) | 4450344..4450883 | - | 540 | WP_046898977.1 | DUF2058 domain-containing protein | - |
| L1F17_RS21625 (L1F17_21625) | 4451187..4452164 | + | 978 | WP_033632135.1 | DUF1852 domain-containing protein | - |
| L1F17_RS21630 (L1F17_21630) | 4452190..4453221 | + | 1032 | WP_004931594.1 | methionine synthase | - |
| L1F17_RS21635 (L1F17_21635) | 4453393..4454742 | + | 1350 | WP_033632134.1 | aromatic acid/H+ symport family MFS transporter | - |
| L1F17_RS21640 (L1F17_21640) | 4454840..4455967 | - | 1128 | WP_060560199.1 | hypothetical protein | - |
| L1F17_RS21645 (L1F17_21645) | 4456224..4457090 | - | 867 | WP_060560201.1 | small-conductance mechanosensitive channel MscS | - |
| L1F17_RS21650 (L1F17_21650) | 4457296..4457964 | + | 669 | WP_033632132.1 | DUF1345 domain-containing protein | - |
| L1F17_RS21655 (L1F17_21655) | 4458021..4459100 | - | 1080 | WP_004931586.1 | class II fructose-bisphosphate aldolase | - |
| L1F17_RS21660 (L1F17_21660) | 4459217..4460380 | - | 1164 | WP_060560202.1 | phosphoglycerate kinase | - |
| L1F17_RS21665 (L1F17_21665) | 4460451..4461467 | - | 1017 | WP_004931582.1 | erythrose-4-phosphate dehydrogenase | - |
| L1F17_RS21670 (L1F17_21670) | 4461779..4461904 | - | 126 | Protein_4224 | LysR family transcriptional regulator | - |
| L1F17_RS21675 (L1F17_21675) | 4461954..4463024 | - | 1071 | WP_060560204.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| L1F17_RS21680 (L1F17_21680) | 4463017..4464786 | - | 1770 | WP_033639426.1 | iron ABC transporter permease | - |
| L1F17_RS21685 (L1F17_21685) | 4464865..4465953 | - | 1089 | WP_033633583.1 | ABC transporter substrate-binding protein | - |
| L1F17_RS21690 (L1F17_21690) | 4466123..4467040 | - | 918 | WP_004931563.1 | DMT family transporter | - |
| L1F17_RS21695 (L1F17_21695) | 4467328..4467660 | + | 333 | WP_004931561.1 | tRNA-binding protein | - |
| L1F17_RS21700 (L1F17_21700) | 4467691..4468566 | + | 876 | WP_033632129.1 | 2OG-Fe dioxygenase family protein | - |
| L1F17_RS21705 (L1F17_21705) | 4468766..4470088 | + | 1323 | WP_060560206.1 | branched-chain amino acid transport system II carrier protein | - |
| L1F17_RS21710 (L1F17_21710) | 4470158..4472152 | - | 1995 | WP_060560030.1 | transketolase | - |
| L1F17_RS21715 (L1F17_21715) | 4472391..4473143 | + | 753 | WP_004937650.1 | M48 family metallopeptidase | - |
| L1F17_RS21720 (L1F17_21720) | 4473186..4474826 | - | 1641 | WP_021504733.1 | thiamine pyrophosphate-binding protein | - |
| L1F17_RS21725 (L1F17_21725) | 4474879..4476348 | - | 1470 | WP_033632126.1 | aldehyde dehydrogenase | - |
| L1F17_RS21730 (L1F17_21730) | 4476365..4477159 | - | 795 | WP_060560208.1 | aspartate dehydrogenase | - |
| L1F17_RS21735 (L1F17_21735) | 4477175..4477969 | - | 795 | WP_060560210.1 | SDR family oxidoreductase | - |
| L1F17_RS21740 (L1F17_21740) | 4477966..4478784 | - | 819 | WP_060560212.1 | alpha/beta hydrolase | - |
| L1F17_RS21745 (L1F17_21745) | 4478784..4479308 | - | 525 | WP_004937634.1 | cupin domain-containing protein | - |
| L1F17_RS21750 (L1F17_21750) | 4479341..4480597 | - | 1257 | WP_015379009.1 | MFS transporter | - |
| L1F17_RS21755 (L1F17_21755) | 4480621..4481832 | - | 1212 | WP_060560214.1 | FAD-dependent oxidoreductase | - |
| L1F17_RS21760 (L1F17_21760) | 4481829..4482770 | - | 942 | WP_033632122.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|