MGE detailed information
MGE type: Prophage MGE length: 57202 bp
Accession: NZ_CP090790 Location: 335177..392378 Organism: Bifidobacterium longum strain D2TC Replicon: chromosome
Accession: NZ_CP090790 Location: 335177..392378 Organism: Bifidobacterium longum strain D2TC Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMY38_RS01580 (LMY38_01580) | 330498..332039 | - | 1542 | WP_032683820.1 | DUF5719 family protein | - |
| LMY38_RS01585 (LMY38_01585) | 332036..335131 | - | 3096 | WP_032683819.1 | membrane protein | - |
| LMY38_RS01590 (LMY38_01590) | 335177..335476 | - | 300 | WP_012578068.1 | WhiB family transcriptional regulator | - |
| LMY38_RS01595 (LMY38_01595) | 335727..337160 | + | 1434 | WP_080770930.1 | Transcriptional regulator LytR | VF |
| LMY38_RS01600 (LMY38_01600) | 337330..339156 | + | 1827 | WP_033504326.1 | Transcriptional regulatory protein ZraR | VF |
| LMY38_RS01605 (LMY38_01605) | 339270..339548 | + | 279 | WP_003835265.1 | WhiB family transcriptional regulator | - |
| LMY38_RS01610 (LMY38_01610) | 339622..341109 | - | 1488 | WP_032683816.1 | PAS domain-containing sensor histidine kinase | - |
| LMY38_RS01615 (LMY38_01615) | 341275..342222 | - | 948 | WP_152596678.1 | serine hydrolase | - |
| LMY38_RS01620 (LMY38_01620) | 342276..343451 | - | 1176 | WP_231938193.1 | serine hydrolase | - |
| LMY38_RS01625 (LMY38_01625) | 343694..344638 | + | 945 | WP_172801531.1 | hypothetical protein | VF |
| LMY38_RS01630 (LMY38_01630) | 344695..345174 | - | 480 | WP_007055115.1 | transcription elongation factor GreA | - |
| LMY38_RS01635 (LMY38_01635) | 345273..345680 | - | 408 | WP_013140494.1 | hypothetical protein | VF |
| LMY38_RS01640 (LMY38_01640) | 345822..347282 | - | 1461 | WP_013140493.1 | L-serine ammonia-lyase | - |
| LMY38_RS01645 (LMY38_01645) | 347427..347996 | - | 570 | WP_032683813.1 | hypothetical protein | - |
| LMY38_RS01650 (LMY38_01650) | 348250..349389 | - | 1140 | WP_231938194.1 | Putative O-antigen transporter ; Integrase | Integrase |
| LMY38_RS01655 (LMY38_01655) | 349542..349781 | + | 240 | WP_032683812.1 | type II toxin-antitoxin system HicA family toxin | - |
| LMY38_RS01660 (LMY38_01660) | 349793..350128 | + | 336 | WP_161788221.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LMY38_RS01665 (LMY38_01665) | 350132..350620 | + | 489 | WP_032683810.1 | hypothetical protein | - |
| LMY38_RS01670 (LMY38_01670) | 350751..351989 | - | 1239 | WP_032683809.1 | Fic family protein | - |
| LMY38_RS01675 (LMY38_01675) | 352173..353405 | - | 1233 | WP_231938195.1 | Osmolarity sensor protein EnvZ | VF |
| LMY38_RS01680 (LMY38_01680) | 353439..353972 | - | 534 | WP_197672355.1 | PH domain-containing protein | - |
| LMY38_RS01685 (LMY38_01685) | 353991..354404 | - | 414 | WP_050494259.1 | ImmA/IrrE family metallo-endopeptidase | - |
| LMY38_RS01690 (LMY38_01690) | 354404..354805 | - | 402 | WP_152596673.1 | hypothetical protein | - |
| LMY38_RS01695 (LMY38_01695) | 354892..355167 | + | 276 | WP_032683807.1 | hypothetical protein | - |
| LMY38_RS01700 (LMY38_01700) | 355210..355821 | - | 612 | WP_152596674.1 | hypothetical protein | - |
| LMY38_RS01705 (LMY38_01705) | 355875..356753 | + | 879 | WP_231938196.1 | prohibitin family protein | - |
| LMY38_RS01710 (LMY38_01710) | 356764..357009 | + | 246 | WP_032683804.1 | hypothetical protein | - |
| LMY38_RS01715 (LMY38_01715) | 357333..357548 | + | 216 | WP_032683803.1 | hypothetical protein | - |
| LMY38_RS01720 (LMY38_01720) | 357562..357717 | + | 156 | WP_154536653.1 | hypothetical protein | - |
| LMY38_RS01725 (LMY38_01725) | 357699..357929 | + | 231 | WP_032683802.1 | hypothetical protein | - |
| LMY38_RS01730 (LMY38_01730) | 357929..358513 | + | 585 | WP_032683801.1 | single-stranded DNA-binding protein | - |
| LMY38_RS01735 (LMY38_01735) | 358526..359938 | + | 1413 | WP_032683800.1 | ParB/RepB/Spo0J family partition protein | - |
| LMY38_RS01740 (LMY38_01740) | 359935..360123 | + | 189 | WP_014485030.1 | hypothetical protein | - |
| LMY38_RS01745 (LMY38_01745) | 360120..361094 | + | 975 | WP_231938197.1 | helix-turn-helix domain-containing protein | - |
| LMY38_RS01750 (LMY38_01750) | 361091..361660 | + | 570 | WP_032683799.1 | hypothetical protein | - |
| LMY38_RS01755 (LMY38_01755) | 361783..362031 | + | 249 | WP_231938198.1 | hypothetical protein | - |
| LMY38_RS01760 (LMY38_01760) | 362092..362502 | + | 411 | WP_032683796.1 | hypothetical protein | - |
| LMY38_RS01765 (LMY38_01765) | 362499..362801 | + | 303 | WP_032683794.1 | hypothetical protein | - |
| LMY38_RS01770 (LMY38_01770) | 362798..363103 | + | 306 | WP_032683793.1 | hypothetical protein | - |
| LMY38_RS01775 (LMY38_01775) | 363165..363377 | + | 213 | WP_032683792.1 | hypothetical protein | - |
| LMY38_RS01780 (LMY38_01780) | 363367..363966 | + | 600 | WP_050494256.1 | hypothetical protein | - |
| LMY38_RS01785 (LMY38_01785) | 363963..364385 | + | 423 | WP_032683791.1 | hypothetical protein | - |
| LMY38_RS01790 (LMY38_01790) | 364382..364675 | + | 294 | WP_032683790.1 | hypothetical protein | - |
| LMY38_RS01795 (LMY38_01795) | 364672..364917 | + | 246 | WP_032683789.1 | hypothetical protein | - |
| LMY38_RS01800 (LMY38_01800) | 364967..365224 | + | 258 | WP_032683788.1 | hypothetical protein | - |
| LMY38_RS01805 (LMY38_01805) | 365468..365659 | + | 192 | WP_032683787.1 | hypothetical protein | - |
| LMY38_RS01810 (LMY38_01810) | 365696..365938 | + | 243 | WP_032683786.1 | hypothetical protein | - |
| LMY38_RS01815 (LMY38_01815) | 365935..366216 | + | 282 | WP_032683784.1 | hypothetical protein | - |
| LMY38_RS01820 (LMY38_01820) | 366213..366491 | + | 279 | WP_023658290.1 | hypothetical protein | - |
| LMY38_RS01825 (LMY38_01825) | 366488..366700 | + | 213 | WP_032683783.1 | hypothetical protein | - |
| LMY38_RS01830 (LMY38_01830) | 366697..366885 | + | 189 | WP_032683782.1 | hypothetical protein | - |
| LMY38_RS01835 (LMY38_01835) | 366999..367775 | + | 777 | WP_231938199.1 | hypothetical protein | - |
| LMY38_RS01840 (LMY38_01840) | 367807..368112 | + | 306 | WP_032683781.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LMY38_RS01845 (LMY38_01845) | 368109..368393 | + | 285 | WP_007051863.1 | putative addiction module antidote protein | Antitoxin Detail |
| LMY38_RS01860 (LMY38_01860) | 368716..368925 | + | 210 | WP_131187342.1 | hypothetical protein | - |
| LMY38_RS01865 (LMY38_01865) | 368884..369393 | - | 510 | WP_032683780.1 | hypothetical protein | - |
| LMY38_RS01870 (LMY38_01870) | 369383..369592 | - | 210 | WP_032683779.1 | hypothetical protein | - |
| LMY38_RS01875 (LMY38_01875) | 369582..369758 | - | 177 | WP_155272922.1 | hypothetical protein | - |
| LMY38_RS01880 (LMY38_01880) | 370341..370595 | + | 255 | WP_032683778.1 | hypothetical protein | - |
| LMY38_RS01885 (LMY38_01885) | 370688..371050 | + | 363 | WP_032683777.1 | hypothetical protein | - |
| LMY38_RS01890 (LMY38_01890) | 371063..372682 | + | 1620 | WP_032683776.1 | terminase | - |
| LMY38_RS01895 (LMY38_01895) | 372727..374220 | + | 1494 | WP_161788222.1 | phage portal protein | - |
| LMY38_RS01900 (LMY38_01900) | 374207..375010 | + | 804 | WP_050494249.1 | HK97 family phage prohead protease | - |
| LMY38_RS01905 (LMY38_01905) | 375016..376200 | + | 1185 | WP_032683775.1 | phage major capsid protein | - |
| LMY38_RS01910 (LMY38_01910) | 376203..376439 | + | 237 | WP_032683774.1 | hypothetical protein | - |
| LMY38_RS01915 (LMY38_01915) | 376457..377002 | + | 546 | WP_032683772.1 | hypothetical protein | - |
| LMY38_RS01920 (LMY38_01920) | 376999..377397 | + | 399 | WP_032683945.1 | hypothetical protein | - |
| LMY38_RS01925 (LMY38_01925) | 377400..377687 | + | 288 | WP_032683771.1 | HK97 gp10 family phage protein | - |
| LMY38_RS01930 (LMY38_01930) | 377687..378118 | + | 432 | WP_032683770.1 | hypothetical protein | - |
| LMY38_RS01935 (LMY38_01935) | 378133..378732 | + | 600 | WP_032683769.1 | hypothetical protein | - |
| LMY38_RS01940 (LMY38_01940) | 378738..379004 | + | 267 | WP_231938200.1 | hypothetical protein | - |
| LMY38_RS01945 (LMY38_01945) | 379105..379527 | + | 423 | WP_032683767.1 | hypothetical protein | - |
| LMY38_RS01950 (LMY38_01950) | 379524..379868 | + | 345 | WP_032683766.1 | hypothetical protein | - |
| LMY38_RS01955 (LMY38_01955) | 379881..382670 | + | 2790 | WP_032683765.1 | hypothetical protein | - |
| LMY38_RS01960 (LMY38_01960) | 382686..383510 | + | 825 | WP_032683764.1 | hypothetical protein | - |
| LMY38_RS01965 (LMY38_01965) | 383514..388775 | + | 5262 | WP_231938201.1 | hypothetical protein | - |
| LMY38_RS01970 (LMY38_01970) | 388855..389169 | + | 315 | WP_032683763.1 | hypothetical protein | - |
| LMY38_RS01975 (LMY38_01975) | 389244..389417 | + | 174 | WP_169742473.1 | hypothetical protein | - |
| LMY38_RS01980 (LMY38_01980) | 389502..389873 | + | 372 | WP_032683762.1 | hypothetical protein | - |
| LMY38_RS01985 (LMY38_01985) | 389893..390033 | + | 141 | WP_242790751.1 | hypothetical protein | - |
| LMY38_RS01990 (LMY38_01990) | 390307..390696 | + | 390 | WP_032683761.1 | hypothetical protein | - |
| LMY38_RS01995 (LMY38_01995) | 390862..391989 | + | 1128 | WP_032683760.1 | GH25 family lysozyme | - |
| LMY38_RS02000 (LMY38_02000) | 392067..392378 | + | 312 | WP_231938202.1 | phage holin | - |
| LMY38_RS02010 (LMY38_02010) | 392919..393920 | - | 1002 | WP_032683759.1 | Ppx/GppA phosphatase family protein | - |
| LMY38_RS02015 (LMY38_02015) | 393983..394549 | - | 567 | WP_032683758.1 | DUF501 domain-containing protein | - |
| LMY38_RS02020 (LMY38_02020) | 394546..395145 | - | 600 | WP_032683757.1 | septum formation initiator family protein | - |
| LMY38_RS02025 (LMY38_02025) | 395236..396534 | - | 1299 | WP_032683756.1 | phosphopyruvate hydratase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|