MGE detailed information
MGE type: Prophage MGE length: 52612 bp
Accession: NZ_CP090611 Location: 2312921..2365532 Organism: Escherichia coli isolate DCE7 Replicon: chromosome
Accession: NZ_CP090611 Location: 2312921..2365532 Organism: Escherichia coli isolate DCE7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZG50_RS11265 (2307974) | 2307974..2309110 | + | 1137 | WP_024247868.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| LZG50_RS11270 (2309094) | 2309094..2309957 | + | 864 | WP_000799399.1 | spermidine/putrescine ABC transporter permease PotB | - |
| LZG50_RS11275 (2310231) | 2310231..2310821 | - | 591 | WP_024235322.1 | bfpT-regulated chaperone | - |
| LZG50_RS11280 (2311004) | 2311004..2311654 | + | 651 | WP_001144078.1 | DUF1076 domain-containing protein | - |
| LZG50_RS11285 (2311733) | 2311733..2312791 | + | 1059 | WP_001300201.1 | T3SS effector EspW | - |
| LZG50_RS11290 (2312921) | 2312921..2313376 | - | 456 | Protein_2215 | DUF1076 domain-containing protein | - |
| LZG50_RS11295 (2313506) | 2313506..2313775 | - | 270 | WP_001101707.1 | phage tail fiber C-terminal domain-containing protein | - |
| LZG50_RS11300 (2313777) | 2313777..2315090 | - | 1314 | WP_234732846.1 | ISNCY family transposase KIS | Transposase |
| LZG50_RS11305 (2315155) | 2315155..2315753 | - | 599 | Protein_2218 | Outer membrane protein X | VF |
| LZG50_RS11310 (2315823) | 2315823..2319236 | - | 3414 | WP_234732847.1 | host specificity protein J | - |
| LZG50_RS11315 (2319297) | 2319297..2319869 | - | 573 | WP_234732929.1 | tail assembly protein | - |
| LZG50_RS11320 (2319866) | 2319866..2320609 | - | 744 | WP_096845311.1 | C40 family peptidase | - |
| LZG50_RS11325 (2320614) | 2320614..2321312 | - | 699 | WP_096845310.1 | phage minor tail protein L | - |
| LZG50_RS11330 (2321312) | 2321312..2321641 | - | 330 | WP_040071534.1 | phage tail protein | - |
| LZG50_RS11335 (2321638) | 2321638..2324199 | - | 2562 | WP_096891243.1 | phage tail tape measure protein | - |
| LZG50_RS11340 (2324192) | 2324192..2324626 | - | 435 | WP_096891244.1 | phage tail assembly protein T | - |
| LZG50_RS11345 (2324608) | 2324608..2325030 | - | 423 | WP_000479139.1 | phage minor tail protein G | - |
| LZG50_RS11350 (2325046) | 2325046..2325786 | - | 741 | WP_021514938.1 | phage tail protein | - |
| LZG50_RS11355 (2325794) | 2325794..2326189 | - | 396 | WP_000683145.1 | phage minor tail U family protein | - |
| LZG50_RS11360 (2326186) | 2326186..2326764 | - | 579 | WP_000985119.1 | phage tail protein | - |
| LZG50_RS11365 (2326776) | 2326776..2327129 | - | 354 | WP_096884133.1 | head-tail joining protein | - |
| LZG50_RS11370 (2327141) | 2327141..2327527 | - | 387 | WP_000158858.1 | DNA-packaging protein FI | - |
| LZG50_RS11375 (2327569) | 2327569..2328594 | - | 1026 | WP_000063265.1 | major capsid protein | - |
| LZG50_RS11380 (2328651) | 2328651..2328983 | - | 333 | WP_052930407.1 | head decoration protein | - |
| LZG50_RS11385 (2328993) | 2328993..2330312 | - | 1320 | WP_096891245.1 | S49 family peptidase | - |
| LZG50_RS11390 (2330293) | 2330293..2331894 | - | 1602 | WP_001345555.1 | phage portal protein | - |
| LZG50_RS11395 (2331891) | 2331891..2332097 | - | 207 | WP_000198149.1 | gpW family protein | - |
| LZG50_RS11400 (2332094) | 2332094..2334019 | - | 1926 | WP_001027191.1 | phage terminase large subunit family protein | - |
| LZG50_RS11405 (2333994) | 2333994..2334539 | - | 546 | WP_000867489.1 | terminase small subunit | - |
| LZG50_RS11410 (2334965) | 2334965..2335105 | + | 141 | WP_001339565.1 | DUF3950 domain-containing protein | - |
| LZG50_RS11415 (2335238) | 2335238..2335564 | - | 327 | WP_000828067.1 | TonB family protein | - |
| LZG50_RS11420 (2336240) | 2336240..2336470 | + | 231 | WP_157778920.1 | hypothetical protein | - |
| LZG50_RS11425 (2336587) | 2336587..2337024 | - | 438 | WP_000092312.1 | lysis protein | - |
| LZG50_RS11430 (2337021) | 2337021..2337518 | - | 498 | WP_001135302.1 | lysozyme RrrD | - |
| LZG50_RS11435 (2337518) | 2337518..2337733 | - | 216 | WP_024164617.1 | class II holin family protein | - |
| LZG50_RS11440 (2338018) | 2338018..2339868 | - | 1851 | WP_234732848.1 | SASA family carbohydrate esterase | - |
| LZG50_RS11445 (2340128) | 2340128..2340463 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| LZG50_RS11450 (2340534) | 2340534..2340650 | + | 117 | Protein_2247 | hypothetical protein | - |
| LZG50_RS11455 (2340744) | 2340744..2340875 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| LZG50_RS11470 (2341674) | 2341674..2342723 | - | 1050 | WP_048250648.1 | site-specific DNA-methyltransferase | - |
| LZG50_RS11475 (2342874) | 2342874..2343071 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| LZG50_RS11480 (2343303) | 2343303..2343845 | - | 543 | WP_000640017.1 | DUF1133 family protein | - |
| LZG50_RS11485 (2343854) | 2343854..2344219 | - | 366 | WP_000140011.1 | RusA family crossover junction endodeoxyribonuclease | - |
| LZG50_RS11490 (2344220) | 2344220..2345275 | - | 1056 | WP_001265092.1 | DUF968 domain-containing protein | - |
| LZG50_RS11495 (2345277) | 2345277..2345555 | - | 279 | WP_001341382.1 | hypothetical protein | - |
| LZG50_RS11500 (2345723) | 2345723..2345878 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| LZG50_RS11505 (2346125) | 2346125..2346229 | - | 105 | WP_001278454.1 | hypothetical protein | - |
| LZG50_RS11510 (2346345) | 2346345..2346533 | - | 189 | WP_064769369.1 | DUF551 domain-containing protein | - |
| LZG50_RS11515 (2346783) | 2346783..2346878 | - | 96 | Protein_2258 | hypothetical protein | - |
| LZG50_RS11520 (2347089) | 2347089..2347214 | - | 126 | Protein_2259 | hypothetical protein | - |
| LZG50_RS11525 (2347225) | 2347225..2347488 | - | 264 | WP_000224233.1 | hypothetical protein | - |
| LZG50_RS11530 (2347490) | 2347490..2347708 | - | 219 | WP_000209148.1 | DUF4014 family protein | - |
| LZG50_RS11535 (2347741) | 2347741..2347953 | - | 213 | WP_000935424.1 | hypothetical protein | - |
| LZG50_RS11540 (2348059) | 2348059..2348481 | - | 423 | WP_032241101.1 | DUF977 family protein | - |
| LZG50_RS11545 (2348497) | 2348497..2349267 | - | 771 | WP_000450649.1 | DUF1627 domain-containing protein | - |
| LZG50_RS11550 (2349301) | 2349301..2349762 | - | 462 | WP_000139447.1 | replication protein P | - |
| LZG50_RS11555 (2349755) | 2349755..2350771 | - | 1017 | WP_001262344.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| LZG50_RS11560 (2350843) | 2350843..2351268 | - | 426 | WP_000693918.1 | toxin YdaT family protein | - |
| LZG50_RS11565 (2351252) | 2351252..2351527 | - | 276 | WP_001048458.1 | helix-turn-helix transcriptional regulator | - |
| LZG50_RS11570 (2351635) | 2351635..2352135 | + | 501 | WP_234732849.1 | helix-turn-helix transcriptional regulator | - |
| LZG50_RS11575 (2352153) | 2352153..2352344 | + | 192 | WP_000100896.1 | hypothetical protein | Antitoxin Detail |
| LZG50_RS11580 (2352344) | 2352344..2352634 | + | 291 | WP_014966210.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZG50_RS11585 (2352904) | 2352904..2353059 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| LZG50_RS24590 (2353061) | 2353061..2353189 | + | 129 | WP_000344964.1 | protein YdfB | - |
| LZG50_RS11590 (2353219) | 2353219..2353437 | + | 219 | WP_001171974.1 | protein YdfC | - |
| LZG50_RS11595 (2354006) | 2354006..2354194 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| LZG50_RS11600 (2354191) | 2354191..2354382 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| LZG50_RS11605 (2354475) | 2354475..2356946 | + | 2472 | WP_234732850.1 | exonuclease | - |
| LZG50_RS11610 (2357008) | 2357008..2357277 | + | 270 | WP_000003742.1 | excisionase | - |
| LZG50_RS11615 (2357246) | 2357246..2358364 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| LZG50_RS11620 (2358531) | 2358531..2359325 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| LZG50_RS11625 (2359322) | 2359322..2360368 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| LZG50_RS11630 (2360426) | 2360426..2360887 | + | 462 | WP_024242613.1 | DUF3592 domain-containing protein | - |
| LZG50_RS11635 (2360884) | 2360884..2361672 | + | 789 | WP_024242614.1 | TPM domain-containing protein | - |
| LZG50_RS11640 (2361810) | 2361810..2362631 | - | 822 | WP_024242615.1 | NAD-dependent protein deacylase | - |
| LZG50_RS11645 (2362647) | 2362647..2363558 | - | 912 | WP_096891078.1 | N-acetylglucosamine kinase | - |
| LZG50_RS11650 (2363587) | 2363587..2364831 | - | 1245 | WP_001251363.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| LZG50_RS11655 (2364831) | 2364831..2365532 | - | 702 | WP_001033687.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| LZG50_RS11660 (2365525) | 2365525..2366724 | - | 1200 | WP_000284711.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| LZG50_RS11665 (2366985) | 2366985..2368058 | + | 1074 | WP_000810267.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|