MGE detailed information
MGE type: Genomic_island MGE length: 16005 bp
Accession: NZ_CP090596 Location: 998115..1014119 Organism: Pectobacterium aroidearum strain QJ003 Replicon: chromosome
Accession: NZ_CP090596 Location: 998115..1014119 Organism: Pectobacterium aroidearum strain QJ003 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y20_RS04465 (L0Y20_04455) | 993449..995869 | - | 2421 | WP_256599527.1 | fimbria/pilus outer membrane usher protein | - |
| L0Y20_RS04470 (L0Y20_04460) | 996095..996643 | - | 549 | WP_256599528.1 | fimbrial protein | - |
| L0Y20_RS04475 (L0Y20_04465) | 997343..998128 | + | 786 | WP_256599529.1 | winged helix-turn-helix domain-containing protein | - |
| L0Y20_RS04480 (L0Y20_04470) | 998115..998585 | + | 471 | WP_012773521.1 | hypothetical protein | - |
| L0Y20_RS04485 (L0Y20_04475) | 998663..999235 | - | 573 | WP_182101085.1 | Trans-aconitate 2-methyltransferase | VF |
| L0Y20_RS04490 (L0Y20_04480) | 999328..1000221 | + | 894 | WP_012773523.1 | ABC transporter six-transmembrane domain-containing protein | - |
| L0Y20_RS04495 (L0Y20_04485) | 1000323..1000877 | - | 555 | WP_181846098.1 | copper-binding periplasmic metallochaperone CueP | - |
| L0Y20_RS04500 (L0Y20_04490) | 1001099..1001863 | - | 765 | WP_256599530.1 | sulfite exporter TauE/SafE family protein | - |
| L0Y20_RS04505 (L0Y20_04495) | 1002083..1002967 | + | 885 | WP_256599531.1 | LysR substrate-binding domain-containing protein | - |
| L0Y20_RS04510 (L0Y20_04500) | 1003047..1004036 | + | 990 | WP_256599532.1 | Gfo/Idh/MocA family oxidoreductase | - |
| L0Y20_RS04515 (L0Y20_04505) | 1004179..1004751 | - | 573 | WP_181848212.1 | hypothetical protein | - |
| L0Y20_RS04520 (L0Y20_04510) | 1005024..1005623 | - | 600 | WP_182099238.1 | TetR/AcrR family transcriptional regulator | - |
| L0Y20_RS04525 (L0Y20_04515) | 1005740..1006339 | + | 600 | WP_256553777.1 | NAD(P)H-dependent oxidoreductase | - |
| L0Y20_RS04530 (L0Y20_04520) | 1006459..1007598 | + | 1140 | WP_256599533.1 | methyltransferase | - |
| L0Y20_RS04535 (L0Y20_04525) | 1008295..1009314 | - | 1020 | Protein_881 | alpha/beta hydrolase | - |
| L0Y20_RS04540 (L0Y20_04530) | 1009475..1009897 | + | 423 | WP_039283843.1 | MarR family transcriptional regulator | - |
| L0Y20_RS04545 (L0Y20_04535) | 1010026..1011213 | - | 1188 | WP_012773534.1 | MFS transporter | - |
| L0Y20_RS04550 (L0Y20_04540) | 1011329..1012285 | + | 957 | WP_012773535.1 | cupin domain-containing protein | - |
| L0Y20_RS04555 (L0Y20_04545) | 1012557..1013294 | - | 738 | WP_256599534.1 | Inner membrane ABC transporter ATP-binding protein YddA | VF |
| L0Y20_RS04560 (L0Y20_04550) | 1013517..1013657 | - | 141 | WP_256599535.1 | hypothetical protein | Toxin Detail |
| L0Y20_RS04565 (L0Y20_04555) | 1013647..1013856 | - | 210 | WP_256599536.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| L0Y20_RS04570 (L0Y20_04560) | 1013871..1014119 | - | 249 | WP_039312496.1 | helix-turn-helix transcriptional regulator | - |
| L0Y20_RS04575 (L0Y20_04565) | 1014126..1014269 | + | 144 | Protein_889 | helix-turn-helix domain-containing protein | - |
| L0Y20_RS04585 | 1014875..1015006 | + | 132 | WP_256553759.1 | hypothetical protein | - |
| L0Y20_RS04590 (L0Y20_04575) | 1015238..1017391 | + | 2154 | WP_256599537.1 | ornithine decarboxylase | - |
| L0Y20_RS04595 (L0Y20_04580) | 1017450..1018901 | - | 1452 | WP_256599538.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|