MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16194 bp
Accession: NZ_CP090588 Location: 3909429..3925622 Organism: Pectobacterium aroidearum strain AK042 Replicon: chromosome
Accession: NZ_CP090588 Location: 3909429..3925622 Organism: Pectobacterium aroidearum strain AK042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y25_RS17700 (L0Y25_17680) | 3905027..3906478 | + | 1452 | WP_256553757.1 | L-asparagine permease | - |
| L0Y25_RS17705 (L0Y25_17685) | 3906537..3908690 | - | 2154 | WP_256553758.1 | ornithine decarboxylase | - |
| L0Y25_RS17710 | 3908922..3909053 | - | 132 | WP_256553759.1 | hypothetical protein | - |
| L0Y25_RS17720 (L0Y25_17695) | 3909606..3910868 | + | 1263 | WP_256553760.1 | Prophage integrase IntS ; Integrase | Integrase |
| L0Y25_RS17725 (L0Y25_17700) | 3910972..3911166 | - | 195 | WP_012773549.1 | YlcI/YnfO family protein | - |
| L0Y25_RS17730 (L0Y25_17705) | 3911352..3911693 | + | 342 | WP_256553761.1 | hypothetical protein | - |
| L0Y25_RS17735 (L0Y25_17710) | 3911822..3913132 | + | 1311 | WP_180776519.1 | IS4 family transposase IS4 | Transposase |
| L0Y25_RS17740 (L0Y25_17715) | 3914037..3914780 | + | 744 | WP_256553762.1 | MobC family replication-relaxation protein | - |
| L0Y25_RS17745 (L0Y25_17720) | 3914839..3915057 | + | 219 | WP_012773205.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| L0Y25_RS17750 (L0Y25_17725) | 3915060..3915365 | + | 306 | WP_256553763.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| L0Y25_RS17755 (L0Y25_17730) | 3916065..3918521 | + | 2457 | WP_112092901.1 | N-6 DNA methylase | - |
| L0Y25_RS17760 (L0Y25_17735) | 3918653..3921649 | - | 2997 | WP_256553766.1 | DEAD/DEAH box helicase family protein | - |
| L0Y25_RS17765 (L0Y25_17740) | 3921649..3923652 | - | 2004 | WP_256553768.1 | site-specific DNA-methyltransferase | - |
| L0Y25_RS17770 (L0Y25_17745) | 3923905..3925029 | - | 1125 | WP_256553771.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L0Y25_RS17775 (L0Y25_17750) | 3925146..3925370 | - | 225 | WP_256553772.1 | DUF1778 domain-containing protein | - |
| L0Y25_RS17780 (L0Y25_17755) | 3925702..3925884 | + | 183 | WP_256553773.1 | hypothetical protein | - |
| L0Y25_RS17785 (L0Y25_17760) | 3926060..3926569 | - | 510 | WP_256553774.1 | hypothetical protein | - |
| L0Y25_RS17790 (L0Y25_17765) | 3926881..3927837 | - | 957 | WP_012773535.1 | cupin domain-containing protein | - |
| L0Y25_RS17795 (L0Y25_17770) | 3927953..3929140 | + | 1188 | WP_256553775.1 | MFS transporter | - |
| L0Y25_RS17800 (L0Y25_17775) | 3929265..3929687 | - | 423 | WP_039283843.1 | MarR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|