MGE detailed information
MGE type: Genomic_island MGE length: 35098 bp
Accession: NZ_CP090588 Location: 3177343..3212440 Organism: Pectobacterium aroidearum strain AK042 Replicon: chromosome
Accession: NZ_CP090588 Location: 3177343..3212440 Organism: Pectobacterium aroidearum strain AK042 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y25_RS14525 (L0Y25_14510) | 3172493..3173080 | + | 588 | WP_256553526.1 | inovirus-type Gp2 protein | - |
| L0Y25_RS14530 (L0Y25_14515) | 3173182..3173394 | + | 213 | WP_256553527.1 | AlpA family transcriptional regulator | - |
| L0Y25_RS14535 (L0Y25_14520) | 3173486..3173911 | + | 426 | WP_256553528.1 | zinc-ribbon domain-containing protein | - |
| L0Y25_RS14540 (L0Y25_14525) | 3174061..3174642 | + | 582 | WP_256553529.1 | hypothetical protein | - |
| L0Y25_RS14545 (L0Y25_14530) | 3174904..3176358 | + | 1455 | WP_256553530.1 | flagellin | - |
| L0Y25_RS14550 (L0Y25_14535) | 3176408..3176953 | + | 546 | WP_256553531.1 | LuxR C-terminal-related transcriptional regulator | - |
| L0Y25_RS14555 (L0Y25_14540) | 3177343..3178248 | + | 906 | WP_256553532.1 | WYL domain-containing protein | - |
| L0Y25_RS14560 (L0Y25_14545) | 3178252..3179097 | + | 846 | WP_256553533.1 | hypothetical protein | - |
| L0Y25_RS14565 (L0Y25_14550) | 3179097..3180548 | + | 1452 | WP_256553534.1 | hypothetical protein | - |
| L0Y25_RS14570 (L0Y25_14555) | 3180756..3182270 | - | 1515 | WP_256553535.1 | class I SAM-dependent DNA methyltransferase | - |
| L0Y25_RS14575 (L0Y25_14560) | 3182267..3183061 | - | 795 | WP_256553536.1 | hypothetical protein | - |
| L0Y25_RS14580 (L0Y25_14565) | 3183058..3184746 | - | 1689 | WP_256553537.1 | AAA family ATPase | - |
| L0Y25_RS14585 (L0Y25_14570) | 3184750..3186522 | - | 1773 | WP_256553538.1 | restriction endonuclease subunit S | - |
| L0Y25_RS14590 (L0Y25_14575) | 3186519..3189299 | - | 2781 | WP_256553539.1 | type I restriction-modification enzyme R subunit C-terminal domain-containing protein | - |
| L0Y25_RS14595 (L0Y25_14580) | 3189436..3190695 | - | 1260 | WP_256553540.1 | Prophage integrase IntA ; Integrase | Integrase |
| L0Y25_RS14615 (L0Y25_14600) | 3191332..3191880 | - | 549 | WP_010279374.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| L0Y25_RS14620 (L0Y25_14605) | 3191939..3193771 | - | 1833 | WP_015840868.1 | excinuclease ABC subunit UvrC | - |
| L0Y25_RS14625 (L0Y25_14610) | 3193764..3194420 | - | 657 | WP_010279369.1 | Response regulator UvrY | VF |
| L0Y25_RS14630 (L0Y25_14615) | 3195064..3195288 | + | 225 | WP_015840869.1 | DUF2594 family protein | - |
| L0Y25_RS14635 (L0Y25_14620) | 3195381..3195668 | - | 288 | WP_015840870.1 | hypothetical protein | - |
| L0Y25_RS14645 (L0Y25_14630) | 3196572..3197984 | + | 1413 | WP_181847877.1 | D-serine/D-alanine/glycine transporter | - |
| L0Y25_RS14650 (L0Y25_14635) | 3198156..3198422 | - | 267 | WP_015840872.1 | anti-adapter protein IraP | - |
| L0Y25_RS14655 (L0Y25_14640) | 3198818..3199087 | - | 270 | Protein_2871 | HTH-type transcriptional regulator CatM | VF |
| L0Y25_RS14665 (L0Y25_14650) | 3199717..3199881 | + | 165 | Protein_2872 | Arm DNA-binding domain-containing protein | - |
| L0Y25_RS14670 (L0Y25_14655) | 3199881..3199982 | + | 102 | Protein_2873 | mobilization protein mobC | - |
| L0Y25_RS14675 (L0Y25_14660) | 3200016..3200330 | - | 315 | WP_039508990.1 | CcdB family protein | Toxin Detail |
| L0Y25_RS14680 (L0Y25_14665) | 3200333..3200569 | - | 237 | WP_039551174.1 | type II toxin-antitoxin system CcdA family antitoxin | Antitoxin Detail |
| L0Y25_RS14685 (L0Y25_14670) | 3200897..3201841 | - | 945 | WP_256553541.1 | zincin-like metallopeptidase domain-containing protein | - |
| L0Y25_RS14690 (L0Y25_14675) | 3202311..3204266 | + | 1956 | WP_256553542.1 | hypothetical protein | - |
| L0Y25_RS14695 (L0Y25_14680) | 3204776..3205852 | - | 1077 | WP_256553543.1 | caspase family protein | - |
| L0Y25_RS14700 (L0Y25_14685) | 3205849..3208326 | - | 2478 | WP_256553544.1 | effector-associated domain EAD1-containing protein | - |
| L0Y25_RS14705 (L0Y25_14690) | 3208337..3209158 | - | 822 | WP_256553545.1 | hypothetical protein | - |
| L0Y25_RS14710 (L0Y25_14695) | 3209163..3210071 | - | 909 | WP_256553546.1 | hypothetical protein | - |
| L0Y25_RS14715 (L0Y25_14700) | 3210115..3211422 | - | 1308 | WP_256553547.1 | GTPase-associated system all-helical protein GASH | - |
| L0Y25_RS14720 (L0Y25_14705) | 3211673..3212179 | + | 507 | Protein_2883 | IS3 family transposase ISYpe1 | Transposase |
| L0Y25_RS14725 (L0Y25_14710) | 3212189..3212565 | - | 377 | Protein_2884 | IS3 family transposase ISYpe1 | Transposase |
| L0Y25_RS14730 (L0Y25_14715) | 3212762..3213652 | - | 891 | WP_256553548.1 | oxidoreductase | - |
| L0Y25_RS14735 (L0Y25_14720) | 3213777..3214979 | - | 1203 | WP_256553549.1 | tyrosine--tRNA ligase | - |
| L0Y25_RS14740 (L0Y25_14725) | 3215297..3215632 | + | 336 | WP_256553550.1 | gamma-glutamylcyclotransferase family protein | - |
| L0Y25_RS14745 (L0Y25_14730) | 3215804..3216049 | - | 246 | WP_180777137.1 | YmjA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|