MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88142 bp
Accession: NZ_CP090587 Location: 4271943..4360084 Organism: Pectobacterium aroidearum strain AK049 Replicon: chromosome
Accession: NZ_CP090587 Location: 4271943..4360084 Organism: Pectobacterium aroidearum strain AK049 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y26_RS19260 (L0Y26_19230) | 4267666..4268967 | + | 1302 | WP_180777427.1 | anaerobic C4-dicarboxylate transporter | - |
| L0Y26_RS19265 (L0Y26_19235) | 4269099..4269431 | + | 333 | WP_012773213.1 | divalent cation tolerance protein CutA | - |
| L0Y26_RS19270 (L0Y26_19240) | 4269407..4271137 | + | 1731 | WP_181847072.1 | protein-disulfide reductase DsbD | - |
| L0Y26_RS19275 (L0Y26_19245) | 4271181..4271756 | + | 576 | WP_119871152.1 | transcriptional regulator | - |
| L0Y26_RS19285 (L0Y26_19255) | 4272192..4273166 | - | 975 | WP_256542375.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L0Y26_RS19290 (L0Y26_19260) | 4273207..4274664 | - | 1458 | WP_256542376.1 | TraI domain-containing protein | - |
| L0Y26_RS19295 (L0Y26_19265) | 4274857..4275492 | + | 636 | WP_256542377.1 | hypothetical protein | - |
| L0Y26_RS19300 (L0Y26_19270) | 4275581..4276579 | + | 999 | WP_256542378.1 | hypothetical protein | - |
| L0Y26_RS19305 (L0Y26_19275) | 4276723..4277922 | + | 1200 | WP_256542379.1 | conjugal transfer protein TraF | - |
| L0Y26_RS19310 (L0Y26_19280) | 4278389..4280905 | - | 2517 | WP_256542380.1 | S8 family peptidase | - |
| L0Y26_RS19315 (L0Y26_19285) | 4280922..4281926 | - | 1005 | WP_256542381.1 | ATP-binding protein | - |
| L0Y26_RS19320 (L0Y26_19290) | 4281991..4282545 | - | 555 | WP_256542382.1 | Tn3 family transposase TnBth3 | Transposase |
| L0Y26_RS19325 (L0Y26_19295) | 4283051..4283977 | - | 927 | WP_256542383.1 | hypothetical protein | - |
| L0Y26_RS19330 (L0Y26_19300) | 4284050..4284940 | - | 891 | WP_256542384.1 | hypothetical protein | - |
| L0Y26_RS19335 (L0Y26_19305) | 4285014..4286975 | - | 1962 | WP_256542385.1 | ArdC-like ssDNA-binding domain-containing protein | - |
| L0Y26_RS19340 (L0Y26_19310) | 4287040..4287525 | - | 486 | WP_256542386.1 | hypothetical protein | - |
| L0Y26_RS19345 (L0Y26_19315) | 4287595..4287867 | - | 273 | WP_256542387.1 | hypothetical protein | - |
| L0Y26_RS19350 (L0Y26_19320) | 4287864..4288301 | - | 438 | WP_256542388.1 | hypothetical protein | - |
| L0Y26_RS19355 (L0Y26_19325) | 4288319..4288534 | - | 216 | WP_103160255.1 | hypothetical protein | - |
| L0Y26_RS19360 (L0Y26_19330) | 4288611..4289087 | - | 477 | WP_103160254.1 | DNA repair protein RadC | - |
| L0Y26_RS19365 (L0Y26_19335) | 4289193..4289663 | - | 471 | WP_103160253.1 | hypothetical protein | - |
| L0Y26_RS19370 (L0Y26_19340) | 4289755..4290270 | - | 516 | WP_256542389.1 | hypothetical protein | - |
| L0Y26_RS19375 (L0Y26_19345) | 4290352..4290702 | - | 351 | WP_256542390.1 | hypothetical protein | - |
| L0Y26_RS19380 (L0Y26_19350) | 4291266..4292153 | - | 888 | WP_256542391.1 | hypothetical protein ; Integrase | Integrase |
| L0Y26_RS19385 (L0Y26_19355) | 4293076..4293918 | + | 843 | WP_256542392.1 | hypothetical protein | - |
| L0Y26_RS19390 (L0Y26_19360) | 4294069..4294791 | - | 723 | WP_256542393.1 | hypothetical protein ; Integrase | Integrase |
| L0Y26_RS19395 (L0Y26_19365) | 4294895..4295188 | + | 294 | WP_256542394.1 | hypothetical protein | - |
| L0Y26_RS19400 (L0Y26_19370) | 4295233..4296789 | - | 1557 | WP_256542395.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| L0Y26_RS19405 (L0Y26_19375) | 4296799..4297143 | - | 345 | WP_256542396.1 | hypothetical protein | - |
| L0Y26_RS19410 (L0Y26_19380) | 4297146..4298573 | - | 1428 | WP_256542397.1 | integrating conjugative element protein | - |
| L0Y26_RS19415 (L0Y26_19385) | 4298589..4299557 | - | 969 | WP_256542398.1 | TIGR03756 family integrating conjugative element protein | - |
| L0Y26_RS19420 (L0Y26_19390) | 4299554..4299949 | - | 396 | WP_256542399.1 | TIGR03757 family integrating conjugative element protein | - |
| L0Y26_RS19425 (L0Y26_19395) | 4300376..4300624 | + | 249 | WP_256542400.1 | hypothetical protein | - |
| L0Y26_RS19430 (L0Y26_19400) | 4300712..4303081 | - | 2370 | WP_256542401.1 | ATP-binding protein | - |
| L0Y26_RS19435 (L0Y26_19405) | 4303270..4303497 | + | 228 | WP_012822424.1 | hypothetical protein | - |
| L0Y26_RS19440 (L0Y26_19410) | 4303494..4304396 | - | 903 | WP_256542402.1 | hypothetical protein | - |
| L0Y26_RS19445 (L0Y26_19415) | 4304566..4304964 | - | 399 | WP_256542403.1 | hypothetical protein | - |
| L0Y26_RS19450 (L0Y26_19420) | 4304961..4307786 | - | 2826 | WP_256542404.1 | conjugative transfer ATPase | - |
| L0Y26_RS19455 (L0Y26_19425) | 4307786..4308196 | - | 411 | WP_102118355.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| L0Y26_RS19460 (L0Y26_19430) | 4308189..4308650 | - | 462 | WP_012822419.1 | hypothetical protein | - |
| L0Y26_RS19465 (L0Y26_19435) | 4308637..4309440 | - | 804 | WP_256542405.1 | hypothetical protein | - |
| L0Y26_RS19470 (L0Y26_19440) | 4309443..4310984 | - | 1542 | WP_256542406.1 | TIGR03752 family integrating conjugative element protein | - |
| L0Y26_RS19475 (L0Y26_19445) | 4310981..4311877 | - | 897 | WP_256542407.1 | TIGR03749 family integrating conjugative element protein | - |
| L0Y26_RS19480 (L0Y26_19450) | 4311874..4312533 | - | 660 | WP_012822415.1 | TIGR03746 family integrating conjugative element protein | - |
| L0Y26_RS19485 (L0Y26_19455) | 4312530..4312904 | - | 375 | WP_256542408.1 | TIGR03750 family conjugal transfer protein | - |
| L0Y26_RS19490 (L0Y26_19460) | 4312916..4313275 | - | 360 | WP_256542409.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| L0Y26_RS19495 (L0Y26_19465) | 4313304..4313540 | - | 237 | WP_048256370.1 | TIGR03758 family integrating conjugative element protein | - |
| L0Y26_RS19500 (L0Y26_19470) | 4313537..4313845 | - | 309 | WP_256542410.1 | RAQPRD family integrative conjugative element protein | - |
| L0Y26_RS19505 (L0Y26_19475) | 4314127..4314651 | - | 525 | WP_256543447.1 | NADAR family protein | - |
| L0Y26_RS19510 (L0Y26_19480) | 4314735..4315799 | - | 1065 | WP_256542411.1 | hypothetical protein | - |
| L0Y26_RS19515 (L0Y26_19485) | 4315857..4316294 | - | 438 | WP_256542412.1 | DUF6530 family protein | - |
| L0Y26_RS19520 (L0Y26_19490) | 4316377..4316607 | - | 231 | Protein_3817 | Tn3 family transposase ISEc63 | Transposase |
| L0Y26_RS19525 (L0Y26_19495) | 4316776..4317342 | + | 567 | WP_256543448.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| L0Y26_RS19530 (L0Y26_19500) | 4317370..4318077 | + | 708 | WP_256542413.1 | major royal jelly family protein | - |
| L0Y26_RS19535 (L0Y26_19505) | 4318118..4318732 | - | 615 | WP_256542414.1 | TIR domain-containing protein | - |
| L0Y26_RS19540 (L0Y26_19510) | 4318901..4319668 | + | 768 | WP_256542415.1 | hypothetical protein | VF |
| L0Y26_RS19545 (L0Y26_19515) | 4319829..4320218 | + | 390 | Protein_3822 | DUF4158 domain-containing protein | - |
| L0Y26_RS19550 (L0Y26_19520) | 4320264..4320653 | - | 390 | WP_256542416.1 | hypothetical protein | - |
| L0Y26_RS19555 (L0Y26_19525) | 4320685..4321431 | - | 747 | WP_256542417.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| L0Y26_RS19560 (L0Y26_19530) | 4321431..4323542 | - | 2112 | WP_256542418.1 | type IV conjugative transfer system coupling protein TraD | - |
| L0Y26_RS19565 (L0Y26_19535) | 4323535..4323951 | - | 417 | WP_256542419.1 | hypothetical protein | - |
| L0Y26_RS19570 (L0Y26_19540) | 4323966..4324517 | - | 552 | WP_256542420.1 | integrating conjugative element protein | - |
| L0Y26_RS19575 (L0Y26_19545) | 4324514..4325164 | - | 651 | WP_256542421.1 | hypothetical protein | VF |
| L0Y26_RS19580 (L0Y26_19550) | 4325143..4325850 | - | 708 | WP_256542422.1 | TIGR03759 family integrating conjugative element protein | - |
| L0Y26_RS19585 (L0Y26_19555) | 4325859..4326662 | - | 804 | WP_256542423.1 | hypothetical protein | - |
| L0Y26_RS19590 (L0Y26_19560) | 4326771..4328270 | - | 1500 | WP_256542424.1 | hypothetical protein | VF |
| L0Y26_RS19595 (L0Y26_19565) | 4328278..4328937 | - | 660 | WP_256542425.1 | hypothetical protein | VF |
| L0Y26_RS19600 (L0Y26_19570) | 4328934..4329398 | - | 465 | WP_256543449.1 | hypothetical protein | VF |
| L0Y26_RS19605 (L0Y26_19575) | 4329442..4330026 | - | 585 | WP_256543450.1 | hypothetical protein | VF |
| L0Y26_RS19610 (L0Y26_19580) | 4330042..4331130 | - | 1089 | WP_256542426.1 | Type II secretion system protein F | VF |
| L0Y26_RS19615 (L0Y26_19585) | 4331123..4332682 | - | 1560 | WP_256542427.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| L0Y26_RS19620 (L0Y26_19590) | 4332714..4333214 | - | 501 | WP_256542428.1 | hypothetical protein | VF |
| L0Y26_RS19625 (L0Y26_19595) | 4333201..4334496 | - | 1296 | WP_256542429.1 | hypothetical protein | VF |
| L0Y26_RS19630 (L0Y26_19600) | 4334500..4336233 | - | 1734 | WP_256542430.1 | Outer membrane lipoprotein BfpB | VF |
| L0Y26_RS19635 (L0Y26_19605) | 4336243..4336680 | - | 438 | WP_103160204.1 | hypothetical protein | VF |
| L0Y26_RS19640 (L0Y26_19610) | 4336682..4337986 | - | 1305 | WP_256542431.1 | hypothetical protein | VF |
| L0Y26_RS19645 (L0Y26_19615) | 4338143..4338580 | - | 438 | WP_256542432.1 | DUF29 domain-containing protein | - |
| L0Y26_RS19650 (L0Y26_19620) | 4338667..4339215 | - | 549 | WP_256542433.1 | single-stranded DNA-binding protein | - |
| L0Y26_RS19655 (L0Y26_19625) | 4339275..4339784 | - | 510 | WP_256542434.1 | STY4534 family ICE replication protein | - |
| L0Y26_RS19660 (L0Y26_19630) | 4340420..4342429 | - | 2010 | WP_256542435.1 | DNA topoisomerase III | - |
| L0Y26_RS19665 (L0Y26_19635) | 4342444..4343196 | - | 753 | WP_256542436.1 | TIGR03761 family integrating conjugative element protein | - |
| L0Y26_RS19670 (L0Y26_19640) | 4343468..4344772 | - | 1305 | WP_256543451.1 | STY4528 family pathogenicity island replication protein | - |
| L0Y26_RS19675 (L0Y26_19645) | 4345014..4345211 | - | 198 | WP_012822373.1 | hypothetical protein | - |
| L0Y26_RS19680 (L0Y26_19650) | 4345208..4345438 | - | 231 | WP_224653819.1 | hypothetical protein | - |
| L0Y26_RS19685 (L0Y26_19655) | 4345440..4346021 | - | 582 | WP_012822371.1 | DUF2857 domain-containing protein | - |
| L0Y26_RS19690 (L0Y26_19660) | 4346127..4346792 | - | 666 | WP_256542437.1 | DUF2786 domain-containing protein | - |
| L0Y26_RS19695 (L0Y26_19665) | 4346789..4347028 | - | 240 | WP_256542438.1 | TraR/DksA C4-type zinc finger protein | - |
| L0Y26_RS19700 (L0Y26_19670) | 4347018..4348748 | - | 1731 | WP_256542439.1 | ParB family protein | - |
| L0Y26_RS19705 (L0Y26_19675) | 4348748..4350103 | - | 1356 | WP_256542440.1 | SPI-7-type island replicative DNA helicase | - |
| L0Y26_RS19710 (L0Y26_19680) | 4350096..4350485 | - | 390 | WP_256542441.1 | hypothetical protein | - |
| L0Y26_RS19715 (L0Y26_19685) | 4350482..4351369 | - | 888 | WP_256542442.1 | Tyrosine-protein kinase CpsD | VF |
| L0Y26_RS19720 (L0Y26_19690) | 4351659..4352918 | + | 1260 | WP_256553863.1 | Prophage integrase IntS ; Integrase | Integrase |
| L0Y26_RS19725 (L0Y26_19695) | 4353133..4354137 | - | 1005 | WP_256553864.1 | 5'-nucleotidase | - |
| L0Y26_RS19730 (L0Y26_19700) | 4354349..4354540 | - | 192 | WP_116165064.1 | YlcI/YnfO family protein | - |
| L0Y26_RS19735 (L0Y26_19705) | 4354726..4355067 | + | 342 | WP_256553865.1 | hypothetical protein | - |
| L0Y26_RS19740 (L0Y26_19710) | 4355521..4355871 | - | 351 | WP_256553866.1 | hypothetical protein | - |
| L0Y26_RS19745 (L0Y26_19715) | 4355969..4356712 | + | 744 | WP_256553867.1 | MobC family replication-relaxation protein | - |
| L0Y26_RS19750 (L0Y26_19720) | 4356771..4356989 | + | 219 | WP_015855076.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| L0Y26_RS19755 (L0Y26_19725) | 4356992..4357159 | + | 168 | Protein_3864 | CcdB family protein | - |
| L0Y26_RS19760 (L0Y26_19730) | 4357466..4358458 | + | 993 | WP_256553868.1 | GAF domain-containing protein | - |
| L0Y26_RS19765 (L0Y26_19735) | 4358587..4358811 | + | 225 | WP_256553869.1 | hypothetical protein | - |
| L0Y26_RS19770 (L0Y26_19740) | 4359048..4359536 | - | 489 | WP_256553870.1 | GNAT family N-acetyltransferase | Toxin Detail |
| L0Y26_RS19775 (L0Y26_19745) | 4359533..4359826 | - | 294 | WP_256553871.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| L0Y26_RS19780 (L0Y26_19750) | 4360167..4360409 | - | 243 | WP_226294582.1 | helix-turn-helix transcriptional regulator | - |
| L0Y26_RS19785 (L0Y26_19755) | 4360530..4360790 | + | 261 | WP_181847074.1 | helix-turn-helix transcriptional regulator | - |
| L0Y26_RS19790 (L0Y26_19760) | 4361170..4362033 | + | 864 | WP_181847075.1 | hypothetical protein | - |
| L0Y26_RS19795 (L0Y26_19765) | 4362017..4362439 | + | 423 | WP_181847076.1 | hypothetical protein | - |
| L0Y26_RS19800 (L0Y26_19770) | 4362821..4363081 | + | 261 | WP_094433671.1 | helix-turn-helix transcriptional regulator | - |
| L0Y26_RS19805 (L0Y26_19775) | 4363160..4364062 | - | 903 | WP_181847077.1 | LysR family transcriptional regulator | - |
| L0Y26_RS19810 (L0Y26_19780) | 4364191..4364454 | + | 264 | WP_012773200.1 | DUF2798 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|