MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 16194 bp
Accession: NZ_CP090587 Location: 3909263..3925456 Organism: Pectobacterium aroidearum strain AK049 Replicon: chromosome
Accession: NZ_CP090587 Location: 3909263..3925456 Organism: Pectobacterium aroidearum strain AK049 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0Y26_RS17700 (L0Y26_17675) | 3904861..3906312 | + | 1452 | WP_256553757.1 | L-asparagine permease | - |
| L0Y26_RS17705 (L0Y26_17680) | 3906371..3908524 | - | 2154 | WP_256553758.1 | ornithine decarboxylase | - |
| L0Y26_RS17710 | 3908756..3908887 | - | 132 | WP_256553759.1 | hypothetical protein | - |
| L0Y26_RS17720 (L0Y26_17690) | 3909440..3910702 | + | 1263 | WP_256553760.1 | Prophage integrase IntS ; Integrase | Integrase |
| L0Y26_RS17725 (L0Y26_17695) | 3910806..3911000 | - | 195 | WP_012773549.1 | YlcI/YnfO family protein | - |
| L0Y26_RS17730 (L0Y26_17700) | 3911186..3911527 | + | 342 | WP_256553761.1 | hypothetical protein | - |
| L0Y26_RS17735 (L0Y26_17705) | 3911656..3912966 | + | 1311 | WP_180776519.1 | IS4 family transposase IS4 | Transposase |
| L0Y26_RS17740 (L0Y26_17710) | 3913871..3914614 | + | 744 | WP_256553762.1 | MobC family replication-relaxation protein | - |
| L0Y26_RS17745 (L0Y26_17715) | 3914673..3914891 | + | 219 | WP_012773205.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| L0Y26_RS17750 (L0Y26_17720) | 3914894..3915199 | + | 306 | WP_256553763.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| L0Y26_RS17755 (L0Y26_17725) | 3915899..3918355 | + | 2457 | WP_112092901.1 | N-6 DNA methylase | - |
| L0Y26_RS17760 (L0Y26_17730) | 3918487..3921483 | - | 2997 | WP_256553766.1 | DEAD/DEAH box helicase family protein | - |
| L0Y26_RS17765 (L0Y26_17735) | 3921483..3923486 | - | 2004 | WP_256553768.1 | site-specific DNA-methyltransferase | - |
| L0Y26_RS17770 (L0Y26_17740) | 3923739..3924863 | - | 1125 | WP_256553771.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| L0Y26_RS17775 (L0Y26_17745) | 3924980..3925204 | - | 225 | WP_256553772.1 | DUF1778 domain-containing protein | - |
| L0Y26_RS17780 (L0Y26_17750) | 3925536..3925718 | + | 183 | WP_256553773.1 | hypothetical protein | - |
| L0Y26_RS17785 (L0Y26_17755) | 3925894..3926403 | - | 510 | WP_256553774.1 | hypothetical protein | - |
| L0Y26_RS17790 (L0Y26_17760) | 3926715..3927671 | - | 957 | WP_012773535.1 | cupin domain-containing protein | - |
| L0Y26_RS17795 (L0Y26_17765) | 3927787..3928974 | + | 1188 | WP_256553775.1 | MFS transporter | - |
| L0Y26_RS17800 (L0Y26_17770) | 3929099..3929521 | - | 423 | WP_039283843.1 | MarR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|