MGE detailed information
MGE type: IScluster/Tn MGE length: 12748 bp
Accession: NZ_CP090568 Location: 2262256..2275003 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2036 Replicon: chromosome
Accession: NZ_CP090568 Location: 2262256..2275003 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPY96_RS10125 (LPY96_10135) | 2257466..2258086 | - | 621 | WP_269340759.1 | DNA-3-methyladenine glycosylase | - |
| LPY96_RS10130 (LPY96_10140) | 2258382..2260040 | + | 1659 | WP_269340761.1 | methyl-accepting chemotaxis protein | - |
| LPY96_RS10135 (LPY96_10145) | 2260052..2260561 | + | 510 | WP_003485975.1 | chemotaxis protein CheW | - |
| LPY96_RS10140 (LPY96_10150) | 2260604..2261710 | - | 1107 | WP_179119000.1 | diguanylate cyclase | - |
| LPY96_RS10145 (LPY96_10155) | 2262002..2262169 | - | 168 | WP_005913009.1 | hypothetical protein | - |
| LPY96_RS10155 (LPY96_10165) | 2263934..2264023 | - | 90 | Protein_1857 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| LPY96_RS10165 (LPY96_10175) | 2265922..2266266 | + | 345 | WP_198303413.1 | hypothetical protein | - |
| LPY96_RS10170 (LPY96_10180) | 2266462..2266740 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LPY96_RS10175 (LPY96_10185) | 2266767..2267018 | + | 252 | WP_229637918.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPY96_RS10180 (LPY96_10190) | 2267021..2267335 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| LPY96_RS10185 | 2267328..2267462 | + | 135 | WP_257608150.1 | hypothetical protein | - |
| LPY96_RS10190 (LPY96_10195) | 2267531..2267785 | + | 255 | WP_223293127.1 | hypothetical protein | - |
| LPY96_RS10195 (LPY96_10200) | 2267998..2268533 | + | 536 | Protein_1865 | IS3 family transposase ISXac2 | Transposase |
| LPY96_RS10200 (LPY96_10205) | 2268645..2271347 | - | 2703 | Protein_1866 | type III secretion system effector avirulence protein AvrBs3 | - |
| LPY96_RS10205 (LPY96_10210) | 2271395..2272620 | + | 1226 | WP_269339250.1 | IS3 family transposase ISJsp1 | Transposase |
| LPY96_RS10210 (LPY96_10215) | 2272661..2273347 | - | 687 | Protein_1868 | TAL effector repeat-containing protein | - |
| LPY96_RS10215 (LPY96_10220) | 2273600..2273842 | + | 243 | Protein_1869 | IS3 family transposase | - |
| LPY96_RS10225 (LPY96_10230) | 2274954..2276732 | - | 1779 | WP_269340773.1 | DotA/TraY family protein | - |
| LPY96_RS10230 (LPY96_10235) | 2277633..2278724 | - | 1092 | WP_033836588.1 | site-specific integrase | - |
| LPY96_RS10240 (LPY96_10245) | 2279012..2279413 | - | 402 | WP_005913011.1 | H-NS family nucleoid-associated regulatory protein | - |
| LPY96_RS10245 (LPY96_10250) | 2279633..2279809 | + | 177 | WP_005913012.1 | DUF3606 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|