MGE detailed information
MGE type: Prophage MGE length: 28631 bp
Accession: NZ_CP090568 Location: 2260604..2289234 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2036 Replicon: chromosome
Accession: NZ_CP090568 Location: 2260604..2289234 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2036 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPY96_RS10125 (LPY96_10135) | 2257466..2258086 | - | 621 | WP_269340759.1 | DNA-3-methyladenine glycosylase | - |
| LPY96_RS10130 (LPY96_10140) | 2258382..2260040 | + | 1659 | WP_269340761.1 | methyl-accepting chemotaxis protein | - |
| LPY96_RS10135 (LPY96_10145) | 2260052..2260561 | + | 510 | WP_003485975.1 | chemotaxis protein CheW | - |
| LPY96_RS10140 (LPY96_10150) | 2260604..2261710 | - | 1107 | WP_179119000.1 | diguanylate cyclase | - |
| LPY96_RS10145 (LPY96_10155) | 2262002..2262169 | - | 168 | WP_005913009.1 | hypothetical protein | - |
| LPY96_RS10155 (LPY96_10165) | 2263934..2264023 | - | 90 | Protein_1857 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| LPY96_RS10165 (LPY96_10175) | 2265922..2266266 | + | 345 | WP_198303413.1 | hypothetical protein | - |
| LPY96_RS10170 (LPY96_10180) | 2266462..2266740 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LPY96_RS10175 (LPY96_10185) | 2266767..2267018 | + | 252 | WP_229637918.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPY96_RS10180 (LPY96_10190) | 2267021..2267335 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| LPY96_RS10185 | 2267328..2267462 | + | 135 | WP_257608150.1 | hypothetical protein | - |
| LPY96_RS10190 (LPY96_10195) | 2267531..2267785 | + | 255 | WP_223293127.1 | hypothetical protein | - |
| LPY96_RS10195 (LPY96_10200) | 2267998..2268533 | + | 536 | Protein_1865 | IS3 family transposase ISXac2 | Transposase |
| LPY96_RS10200 (LPY96_10205) | 2268645..2271347 | - | 2703 | Protein_1866 | type III secretion system effector avirulence protein AvrBs3 | - |
| LPY96_RS10205 (LPY96_10210) | 2271395..2272620 | + | 1226 | WP_269339250.1 | IS3 family transposase ISJsp1 | Transposase |
| LPY96_RS10210 (LPY96_10215) | 2272661..2273347 | - | 687 | Protein_1868 | TAL effector repeat-containing protein | - |
| LPY96_RS10215 (LPY96_10220) | 2273600..2273842 | + | 243 | Protein_1869 | IS3 family transposase | - |
| LPY96_RS10225 (LPY96_10230) | 2274954..2276732 | - | 1779 | WP_269340773.1 | hypothetical protein | VF |
| LPY96_RS10230 (LPY96_10235) | 2277633..2278724 | - | 1092 | WP_033836588.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LPY96_RS10240 (LPY96_10245) | 2279012..2279413 | - | 402 | WP_005913011.1 | H-NS family nucleoid-associated regulatory protein | - |
| LPY96_RS10245 (LPY96_10250) | 2279633..2279809 | + | 177 | WP_005913012.1 | DUF3606 domain-containing protein | - |
| LPY96_RS10250 (LPY96_10255) | 2279825..2282443 | + | 2619 | WP_005913013.1 | DNA ligase D | - |
| LPY96_RS10255 (LPY96_10260) | 2282648..2283739 | - | 1092 | WP_269340774.1 | ribonuclease D | - |
| LPY96_RS10265 (LPY96_10270) | 2284110..2285855 | + | 1746 | WP_269340775.1 | Serine/threonine-protein kinase pkn1 | VF |
| LPY96_RS10270 (LPY96_10275) | 2286365..2287627 | + | 1263 | WP_269340777.1 | virulence factor | - |
| LPY96_RS10275 (LPY96_10280) | 2287897..2289234 | - | 1338 | WP_269340778.1 | exodeoxyribonuclease VII large subunit | - |
| LPY96_RS10280 (LPY96_10285) | 2289379..2290446 | - | 1068 | WP_269340779.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| LPY96_RS10285 (LPY96_10290) | 2290471..2291958 | + | 1488 | WP_269340781.1 | NAD(P)H-hydrate dehydratase | - |
| LPY96_RS10290 (LPY96_10295) | 2291955..2292455 | + | 501 | WP_005913023.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|