MGE detailed information
MGE type: IScluster/Tn MGE length: 12749 bp
Accession: NZ_CP090564 Location: 2260988..2273736 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2012 Replicon: chromosome
Accession: NZ_CP090564 Location: 2260988..2273736 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2012 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPY95_RS09405 (LPY95_09415) | 2256198..2256818 | - | 621 | WP_078566316.1 | DNA-3-methyladenine glycosylase | - |
| LPY95_RS09410 (LPY95_09420) | 2257114..2258772 | + | 1659 | WP_269360037.1 | methyl-accepting chemotaxis protein | - |
| LPY95_RS09415 (LPY95_09425) | 2258784..2259293 | + | 510 | WP_003485975.1 | chemotaxis protein CheW | - |
| LPY95_RS09420 (LPY95_09430) | 2259336..2260442 | - | 1107 | WP_269357556.1 | sensor domain-containing diguanylate cyclase | - |
| LPY95_RS09425 (LPY95_09435) | 2260734..2260901 | - | 168 | WP_005913009.1 | hypothetical protein | - |
| LPY95_RS09435 (LPY95_09445) | 2262667..2262756 | - | 90 | Protein_1852 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| LPY95_RS09445 (LPY95_09455) | 2264655..2264999 | + | 345 | WP_198303413.1 | hypothetical protein | - |
| LPY95_RS09450 (LPY95_09460) | 2265195..2265473 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LPY95_RS09455 (LPY95_09465) | 2265500..2265751 | + | 252 | WP_229637918.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LPY95_RS09460 (LPY95_09470) | 2265754..2266068 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| LPY95_RS09465 | 2266061..2266195 | + | 135 | WP_257608150.1 | hypothetical protein | - |
| LPY95_RS09470 (LPY95_09475) | 2266264..2266518 | + | 255 | WP_223293127.1 | hypothetical protein | - |
| LPY95_RS09475 (LPY95_09480) | 2266731..2267266 | + | 536 | Protein_1860 | IS3 family transposase ISXac2 | Transposase |
| LPY95_RS09480 (LPY95_09485) | 2267378..2270080 | - | 2703 | Protein_1861 | type III secretion system effector avirulence protein AvrBs3 | - |
| LPY95_RS09485 (LPY95_09490) | 2270128..2271353 | + | 1226 | WP_269339250.1 | IS3 family transposase ISJsp1 | Transposase |
| LPY95_RS09490 (LPY95_09495) | 2271394..2272080 | - | 687 | Protein_1863 | TAL effector repeat-containing protein | - |
| LPY95_RS09495 (LPY95_09500) | 2272333..2272575 | + | 243 | Protein_1864 | IS3 family transposase | - |
| LPY95_RS09505 (LPY95_09510) | 2273687..2275465 | - | 1779 | WP_269357323.1 | DotA/TraY family protein | - |
| LPY95_RS09510 (LPY95_09515) | 2276366..2277457 | - | 1092 | WP_033836588.1 | site-specific integrase | - |
| LPY95_RS09520 (LPY95_09525) | 2277745..2278146 | - | 402 | WP_005913011.1 | H-NS family nucleoid-associated regulatory protein | - |
| LPY95_RS09525 (LPY95_09530) | 2278366..2278542 | + | 177 | WP_033836587.1 | DUF3606 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|