MGE detailed information
MGE type: Genomic_island MGE length: 20499 bp
Accession: NZ_CP090564 Location: 204553..225051 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2012 Replicon: chromosome
Accession: NZ_CP090564 Location: 204553..225051 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2012 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPY95_RS00850 (LPY95_00850) | 202645..203022 | - | 378 | Protein_166 | hypothetical protein | - |
| LPY95_RS00855 (LPY95_00855) | 203534..203923 | - | 390 | WP_039582269.1 | hypothetical protein | - |
| LPY95_RS00860 (LPY95_00860) | 204235..204525 | + | 291 | WP_017158353.1 | hypothetical protein | - |
| LPY95_RS00865 (LPY95_00865) | 204553..204924 | + | 372 | WP_007968749.1 | TrbC/VirB2 family protein | - |
| LPY95_RS00870 (LPY95_00870) | 204921..205220 | + | 300 | WP_269359189.1 | VirB3 family type IV secretion system protein | - |
| LPY95_RS00875 (LPY95_00875) | 205243..207876 | + | 2634 | WP_095702123.1 | hypothetical protein | VF |
| LPY95_RS00880 (LPY95_00880) | 207873..208538 | + | 666 | WP_269359191.1 | type IV secretion system protein | - |
| LPY95_RS00885 (LPY95_00885) | 208604..208804 | + | 201 | WP_227478623.1 | hypothetical protein | - |
| LPY95_RS00890 (LPY95_00890) | 208797..209204 | + | 408 | WP_017161284.1 | hypothetical protein | - |
| LPY95_RS00895 (LPY95_00895) | 209192..210058 | + | 867 | WP_017161285.1 | type IV secretion system protein | - |
| LPY95_RS00900 (LPY95_00900) | 210078..210728 | + | 651 | WP_017160572.1 | type IV secretion system protein | - |
| LPY95_RS00905 (LPY95_00905) | 210753..211535 | + | 783 | WP_017157765.1 | hypothetical protein | VF |
| LPY95_RS00910 (LPY95_00910) | 211537..212757 | + | 1221 | WP_269359196.1 | hypothetical protein | VF |
| LPY95_RS00915 (LPY95_00915) | 212768..213790 | + | 1023 | WP_269359198.1 | hypothetical protein | VF |
| LPY95_RS00920 (LPY95_00920) | 213801..214688 | + | 888 | WP_269360175.1 | hypothetical protein | VF |
| LPY95_RS00925 (LPY95_00925) | 214734..215321 | + | 588 | WP_269359200.1 | hypothetical protein | - |
| LPY95_RS00930 (LPY95_00930) | 215367..215942 | + | 576 | WP_039582731.1 | Cardiolipin synthase B | VF |
| LPY95_RS00935 (LPY95_00935) | 215953..216366 | + | 414 | WP_269359201.1 | hypothetical protein | - |
| LPY95_RS00940 (LPY95_00940) | 216420..216836 | + | 417 | WP_017159868.1 | hypothetical protein | - |
| LPY95_RS00945 (LPY95_00945) | 217021..217191 | + | 171 | WP_017158763.1 | antitoxin MazE family protein | Antitoxin Detail |
| LPY95_RS00950 (LPY95_00950) | 217188..217514 | + | 327 | WP_007968778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LPY95_RS00955 (LPY95_00955) | 217560..218204 | - | 645 | WP_039580900.1 | Abi family protein | - |
| LPY95_RS00960 (LPY95_00960) | 218792..219040 | + | 249 | Protein_188 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LPY95_RS00965 (LPY95_00965) | 219109..222086 | - | 2978 | Protein_189 | conjugative relaxase | - |
| LPY95_RS00970 (LPY95_00970) | 222100..223674 | - | 1575 | WP_269359205.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LPY95_RS00975 (LPY95_00975) | 223678..223851 | - | 174 | Protein_191 | hypothetical protein | - |
| LPY95_RS00980 (LPY95_00980) | 223851..224246 | - | 396 | WP_269359207.1 | conjugal transfer protein TraA | - |
| LPY95_RS00985 (LPY95_00985) | 224605..225051 | + | 447 | WP_017160486.1 | hypothetical protein | - |
| LPY95_RS00990 (LPY95_00990) | 225060..225755 | + | 696 | WP_269356287.1 | StbB family protein | - |
| LPY95_RS00995 (LPY95_00995) | 225803..226156 | + | 354 | WP_269339657.1 | hypothetical protein | - |
| LPY95_RS01000 (LPY95_01000) | 226294..226575 | - | 282 | WP_017158383.1 | type II toxin-antitoxin system YafQ family toxin | - |
| LPY95_RS01005 (LPY95_01005) | 226562..226831 | - | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| LPY95_RS01010 (LPY95_01010) | 226940..227902 | - | 963 | WP_007968792.1 | recombinase family protein | - |
| LPY95_RS01015 (LPY95_01015) | 228172..228340 | - | 169 | Protein_199 | KfrA protein | - |
| LPY95_RS01020 (LPY95_01020) | 228454..228735 | - | 282 | WP_017161425.1 | hypothetical protein | - |
| LPY95_RS01025 (LPY95_01025) | 228759..229409 | - | 651 | WP_223304348.1 | AAA family ATPase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|