MGE detailed information
MGE type: IScluster/Tn MGE length: 12749 bp
Accession: NZ_CP090561 Location: 2263015..2275763 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Accession: NZ_CP090561 Location: 2263015..2275763 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM68_RS09425 (LGM68_09430) | 2258225..2258845 | - | 621 | WP_269357320.1 | DNA-3-methyladenine glycosylase | - |
| LGM68_RS09430 (LGM68_09435) | 2259141..2260799 | + | 1659 | WP_269357321.1 | methyl-accepting chemotaxis protein | - |
| LGM68_RS09435 (LGM68_09440) | 2260811..2261320 | + | 510 | WP_003485975.1 | chemotaxis protein CheW | - |
| LGM68_RS09440 (LGM68_09445) | 2261363..2262469 | - | 1107 | WP_269357556.1 | sensor domain-containing diguanylate cyclase | - |
| LGM68_RS09445 (LGM68_09450) | 2262761..2262928 | - | 168 | WP_005913009.1 | hypothetical protein | - |
| LGM68_RS09455 (LGM68_09460) | 2264694..2264783 | - | 90 | Protein_1856 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| LGM68_RS09465 (LGM68_09470) | 2266682..2267026 | + | 345 | WP_198303413.1 | hypothetical protein | - |
| LGM68_RS09470 (LGM68_09475) | 2267222..2267500 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LGM68_RS09475 (LGM68_09480) | 2267527..2267778 | + | 252 | WP_229637918.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGM68_RS09480 (LGM68_09485) | 2267781..2268095 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| LGM68_RS09485 | 2268088..2268222 | + | 135 | WP_257608150.1 | hypothetical protein | - |
| LGM68_RS09490 (LGM68_09490) | 2268291..2268545 | + | 255 | WP_223293127.1 | hypothetical protein | - |
| LGM68_RS09495 (LGM68_09495) | 2268758..2269293 | + | 536 | Protein_1864 | IS3 family transposase ISXac2 | Transposase |
| LGM68_RS09500 (LGM68_09500) | 2269405..2272107 | - | 2703 | Protein_1865 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS09505 (LGM68_09505) | 2272155..2273380 | + | 1226 | WP_269338335.1 | IS3 family transposase ISJsp1 | Transposase |
| LGM68_RS09510 (LGM68_09510) | 2273421..2274107 | - | 687 | Protein_1867 | TAL effector repeat-containing protein | - |
| LGM68_RS09515 (LGM68_09515) | 2274360..2274602 | + | 243 | Protein_1868 | IS3 family transposase | - |
| LGM68_RS09525 (LGM68_09525) | 2275714..2277492 | - | 1779 | WP_269357323.1 | DotA/TraY family protein | - |
| LGM68_RS09530 (LGM68_09530) | 2278393..2279484 | - | 1092 | WP_033836588.1 | site-specific integrase | - |
| LGM68_RS09540 (LGM68_09540) | 2279772..2280173 | - | 402 | WP_005913011.1 | H-NS family nucleoid-associated regulatory protein | - |
| LGM68_RS09545 (LGM68_09545) | 2280393..2280569 | + | 177 | WP_033836587.1 | DUF3606 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|