MGE detailed information
MGE type: Prophage MGE length: 73307 bp
Accession: NZ_CP090561 Location: 2241926..2315232 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Accession: NZ_CP090561 Location: 2241926..2315232 Organism: Xanthomonas citri pv. malvacearum strain CFBP 2530 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LGM68_RS09325 (LGM68_09330) | 2237004..2238005 | - | 1002 | WP_005915287.1 | magnesium and cobalt transport protein CorA | - |
| LGM68_RS09330 (LGM68_09335) | 2238021..2239304 | - | 1284 | WP_269357304.1 | DUF4105 domain-containing protein | - |
| LGM68_RS09335 (LGM68_09340) | 2239301..2240179 | - | 879 | WP_003488337.1 | transporter associated domain-containing protein | - |
| LGM68_RS09340 (LGM68_09345) | 2240275..2240793 | - | 519 | WP_005915284.1 | hypothetical protein | - |
| LGM68_RS09345 (LGM68_09350) | 2240793..2241278 | - | 486 | WP_003488340.1 | rRNA maturation RNase YbeY | - |
| LGM68_RS09350 (LGM68_09355) | 2241376..2241924 | - | 549 | WP_269357306.1 | hypothetical protein | - |
| LGM68_RS09355 (LGM68_09360) | 2241926..2242909 | - | 984 | WP_269357308.1 | PhoH family protein | - |
| LGM68_RS09360 (LGM68_09365) | 2243332..2244786 | - | 1455 | WP_269340745.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| LGM68_RS09365 (LGM68_09370) | 2244825..2245469 | - | 645 | WP_003485951.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LGM68_RS09370 (LGM68_09375) | 2245574..2246539 | + | 966 | WP_005915271.1 | WYL domain-containing protein | - |
| LGM68_RS09375 (LGM68_09380) | 2246735..2247718 | + | 984 | WP_269357310.1 | transglycosylase SLT domain-containing protein | - |
| LGM68_RS09380 (LGM68_09385) | 2248225..2248869 | + | 645 | WP_003485955.1 | ubiquinol-cytochrome c reductase iron-sulfur subunit | - |
| LGM68_RS09385 (LGM68_09390) | 2248869..2250128 | + | 1260 | WP_269357312.1 | cytochrome bc complex cytochrome b subunit | - |
| LGM68_RS09390 (LGM68_09395) | 2250121..2250879 | + | 759 | WP_269357314.1 | cytochrome c1 | - |
| LGM68_RS09395 (LGM68_09400) | 2251280..2251915 | + | 636 | WP_269357316.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| LGM68_RS09400 (LGM68_09405) | 2251994..2252434 | + | 441 | WP_005915263.1 | ClpXP protease specificity-enhancing factor | - |
| LGM68_RS09405 (LGM68_09410) | 2252624..2252941 | + | 318 | WP_033836595.1 | hypothetical protein | - |
| LGM68_RS09410 (LGM68_09415) | 2253149..2253529 | - | 381 | WP_269340755.1 | DUF3301 domain-containing protein | - |
| LGM68_RS09420 (LGM68_09425) | 2253891..2258285 | + | 4395 | WP_269357318.1 | DEAD/DEAH box helicase | - |
| LGM68_RS09425 (LGM68_09430) | 2258225..2258845 | - | 621 | WP_269357320.1 | DNA-3-methyladenine glycosylase | - |
| LGM68_RS09430 (LGM68_09435) | 2259141..2260799 | + | 1659 | WP_269357321.1 | hypothetical protein | VF |
| LGM68_RS09435 (LGM68_09440) | 2260811..2261320 | + | 510 | WP_003485975.1 | hypothetical protein | VF |
| LGM68_RS09440 (LGM68_09445) | 2261363..2262469 | - | 1107 | WP_269357556.1 | sensor domain-containing diguanylate cyclase | - |
| LGM68_RS09445 (LGM68_09450) | 2262761..2262928 | - | 168 | WP_005913009.1 | hypothetical protein | - |
| LGM68_RS09455 (LGM68_09460) | 2264694..2264783 | - | 90 | Protein_1856 | type I restriction-modification system subunit M N-terminal domain-containing protein | - |
| LGM68_RS09465 (LGM68_09470) | 2266682..2267026 | + | 345 | WP_198303413.1 | hypothetical protein | - |
| LGM68_RS09470 (LGM68_09475) | 2267222..2267500 | + | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LGM68_RS09475 (LGM68_09480) | 2267527..2267778 | + | 252 | WP_229637918.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LGM68_RS09480 (LGM68_09485) | 2267781..2268095 | + | 315 | WP_015463310.1 | hypothetical protein | - |
| LGM68_RS09485 | 2268088..2268222 | + | 135 | WP_257608150.1 | hypothetical protein | - |
| LGM68_RS09490 (LGM68_09490) | 2268291..2268545 | + | 255 | WP_223293127.1 | hypothetical protein | - |
| LGM68_RS09495 (LGM68_09495) | 2268758..2269293 | + | 536 | Protein_1864 | IS3 family transposase ISXac2 | Transposase |
| LGM68_RS09500 (LGM68_09500) | 2269405..2272107 | - | 2703 | Protein_1865 | type III secretion system effector avirulence protein AvrBs3 | - |
| LGM68_RS09505 (LGM68_09505) | 2272155..2273380 | + | 1226 | WP_269338335.1 | IS3 family transposase ISJsp1 | Transposase |
| LGM68_RS09510 (LGM68_09510) | 2273421..2274107 | - | 687 | Protein_1867 | TAL effector repeat-containing protein | - |
| LGM68_RS09515 (LGM68_09515) | 2274360..2274602 | + | 243 | Protein_1868 | IS3 family transposase | - |
| LGM68_RS09525 (LGM68_09525) | 2275714..2277492 | - | 1779 | WP_269357323.1 | hypothetical protein | VF |
| LGM68_RS09530 (LGM68_09530) | 2278393..2279484 | - | 1092 | WP_033836588.1 | hypothetical protein ; Integrase | Integrase |
| LGM68_RS09540 (LGM68_09540) | 2279772..2280173 | - | 402 | WP_005913011.1 | H-NS family nucleoid-associated regulatory protein | - |
| LGM68_RS09545 (LGM68_09545) | 2280393..2280569 | + | 177 | WP_033836587.1 | DUF3606 domain-containing protein | - |
| LGM68_RS09550 (LGM68_09550) | 2280585..2283203 | + | 2619 | WP_269357325.1 | DNA ligase D | - |
| LGM68_RS09555 (LGM68_09555) | 2283408..2284499 | - | 1092 | WP_269340774.1 | ribonuclease D | - |
| LGM68_RS09565 (LGM68_09565) | 2284870..2286615 | + | 1746 | WP_269357327.1 | hypothetical protein | VF |
| LGM68_RS09570 (LGM68_09570) | 2287125..2288387 | + | 1263 | WP_269340777.1 | virulence factor | - |
| LGM68_RS09575 (LGM68_09575) | 2288657..2289994 | - | 1338 | WP_033836585.1 | exodeoxyribonuclease VII large subunit | - |
| LGM68_RS09580 (LGM68_09580) | 2290139..2291206 | - | 1068 | WP_269357330.1 | tRNA epoxyqueuosine(34) reductase QueG | - |
| LGM68_RS09585 (LGM68_09585) | 2291231..2292718 | + | 1488 | WP_269340781.1 | NAD(P)H-hydrate dehydratase | - |
| LGM68_RS09590 (LGM68_09590) | 2292715..2293215 | + | 501 | WP_005913023.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| LGM68_RS09595 (LGM68_09595) | 2293286..2294995 | + | 1710 | WP_050554787.1 | N-acetylmuramoyl-L-alanine amidase | - |
| LGM68_RS09600 (LGM68_09600) | 2295134..2297011 | + | 1878 | WP_033836584.1 | DNA mismatch repair endonuclease MutL | - |
| LGM68_RS09605 (LGM68_09605) | 2297011..2297946 | + | 936 | WP_005913042.1 | DUF1684 domain-containing protein | - |
| LGM68_RS09610 (LGM68_09610) | 2297980..2298954 | + | 975 | WP_033836583.1 | TraB/GumN family protein | - |
| LGM68_RS09620 (LGM68_09620) | 2299141..2299716 | - | 576 | WP_003486016.1 | polyhydroxyalkanoate synthesis repressor PhaR | - |
| LGM68_RS09625 (LGM68_09625) | 2299876..2300616 | - | 741 | WP_003486018.1 | hypothetical protein | VF |
| LGM68_RS09630 (LGM68_09630) | 2300698..2301597 | - | 900 | WP_005913047.1 | tRNA glutamyl-Q(34) synthetase GluQRS | - |
| LGM68_RS09635 (LGM68_09635) | 2301695..2302573 | + | 879 | WP_269357333.1 | protease HtpX | - |
| LGM68_RS09640 (LGM68_09640) | 2302674..2304743 | - | 2070 | WP_269357335.1 | EAL domain-containing protein | - |
| LGM68_RS09645 (LGM68_09645) | 2304963..2306144 | - | 1182 | WP_269357337.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| LGM68_RS09650 (LGM68_09650) | 2306141..2306689 | - | 549 | WP_269357339.1 | YaeQ family protein | - |
| LGM68_RS09655 (LGM68_09655) | 2307245..2307460 | + | 216 | WP_005913053.1 | cold-shock protein | - |
| LGM68_RS09660 (LGM68_09660) | 2307632..2308330 | + | 699 | WP_033836582.1 | glutathione S-transferase | - |
| LGM68_RS09665 (LGM68_09665) | 2308398..2309273 | - | 876 | WP_005913055.1 | alpha/beta hydrolase | - |
| LGM68_RS09670 (LGM68_09670) | 2309549..2311105 | + | 1557 | WP_033836581.1 | YdiU family protein | - |
| LGM68_RS09675 (LGM68_09675) | 2311200..2311760 | + | 561 | WP_269357341.1 | adenine phosphoribosyltransferase | - |
| LGM68_RS09680 (LGM68_09680) | 2311858..2313234 | - | 1377 | WP_005913058.1 | ATP-dependent RNA helicase DbpA | - |
| LGM68_RS09685 (LGM68_09685) | 2313343..2315232 | + | 1890 | WP_269340799.1 | ATP-binding cassette domain-containing protein | - |
| LGM68_RS09690 (LGM68_09690) | 2315513..2315938 | - | 426 | WP_003486050.1 | barstar family protein | - |
| LGM68_RS09695 (LGM68_09695) | 2315935..2316375 | - | 441 | WP_033836580.1 | ribonuclease | - |
| LGM68_RS09700 (LGM68_09700) | 2316628..2317239 | + | 612 | WP_003486056.1 | superoxide dismutase | - |
| LGM68_RS09705 (LGM68_09705) | 2317591..2318424 | - | 834 | WP_005913068.1 | inositol monophosphatase family protein | - |
| LGM68_RS09710 (LGM68_09710) | 2318542..2319306 | + | 765 | WP_269357343.1 | RNA methyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|