MGE detailed information
MGE type: Prophage MGE length: 36697 bp
Accession: NZ_CP090547 Location: 434411..471107 Organism: Xylella fastidiosa subsp. sandyi strain OC8 Replicon: chromosome
Accession: NZ_CP090547 Location: 434411..471107 Organism: Xylella fastidiosa subsp. sandyi strain OC8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ756_RS01740 (LZ756_01740) | 429882..430541 | - | 660 | WP_020851872.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LZ756_RS01745 (LZ756_01745) | 430653..432545 | - | 1893 | WP_020851873.1 | phosphogluconate dehydratase | - |
| LZ756_RS01750 (LZ756_01750) | 432685..433404 | - | 720 | WP_020851874.1 | 6-phosphogluconolactonase | - |
| LZ756_RS01755 (LZ756_01755) | 433401..434414 | - | 1014 | WP_020851875.1 | glucokinase | - |
| LZ756_RS01760 (LZ756_01760) | 434411..435913 | - | 1503 | WP_020851876.1 | glucose-6-phosphate dehydrogenase | - |
| LZ756_RS01765 (LZ756_01765) | 436173..437267 | + | 1095 | WP_024748965.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| LZ756_RS01770 (LZ756_01770) | 437412..438272 | - | 861 | WP_230577850.1 | folate-binding protein YgfZ | - |
| LZ756_RS01775 (LZ756_01775) | 438554..438718 | + | 165 | WP_072866360.1 | DUF1674 domain-containing protein | - |
| LZ756_RS01780 (LZ756_01780) | 438776..439171 | + | 396 | WP_024748967.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| LZ756_RS01785 (LZ756_01785) | 439168..439551 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| LZ756_RS01790 (LZ756_01790) | 439559..441349 | + | 1791 | WP_020851880.1 | succinate dehydrogenase flavoprotein subunit | - |
| LZ756_RS01795 (LZ756_01795) | 441370..442155 | + | 786 | WP_020851881.1 | succinate dehydrogenase iron-sulfur subunit | - |
| LZ756_RS01800 (LZ756_01800) | 442276..442524 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| LZ756_RS01805 (LZ756_01805) | 442556..442927 | + | 372 | WP_225621722.1 | hypothetical protein | - |
| LZ756_RS01810 (LZ756_01810) | 442953..444194 | + | 1242 | WP_020851882.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| LZ756_RS01815 (LZ756_01815) | 444187..444909 | + | 723 | WP_020851883.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| LZ756_RS01820 (LZ756_01820) | 445256..447733 | + | 2478 | WP_020851884.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| LZ756_RS01825 (LZ756_01825) | 447718..448380 | + | 663 | WP_020851885.1 | MotA/TolQ/ExbB proton channel family protein | - |
| LZ756_RS01830 (LZ756_01830) | 448385..448822 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| LZ756_RS01835 (LZ756_01835) | 448840..450588 | + | 1749 | WP_020851886.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| LZ756_RS01840 (LZ756_01840) | 450585..451604 | + | 1020 | WP_020851887.1 | Tetraacyldisaccharide 4'-kinase | VF |
| LZ756_RS01845 (LZ756_01845) | 452013..453095 | - | 1083 | WP_020850949.1 | phage late control D family protein | - |
| LZ756_RS01850 (LZ756_01850) | 453086..453304 | - | 219 | WP_020850950.1 | tail protein X | - |
| LZ756_RS01855 (LZ756_01855) | 453301..453438 | - | 138 | WP_230577851.1 | phage tail protein | - |
| LZ756_RS01860 (LZ756_01860) | 453407..453787 | - | 381 | WP_020850951.1 | phage tail protein | - |
| LZ756_RS01865 (LZ756_01865) | 453784..456003 | - | 2220 | WP_020850952.1 | phage tail tape measure protein | - |
| LZ756_RS01870 (LZ756_01870) | 456130..456417 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| LZ756_RS01875 (LZ756_01875) | 456420..456929 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| LZ756_RS01880 (LZ756_01880) | 456929..458107 | - | 1179 | WP_020850953.1 | phage tail sheath family protein | - |
| LZ756_RS01885 (LZ756_01885) | 458172..459764 | - | 1593 | WP_024748652.1 | tail fiber domain-containing protein | - |
| LZ756_RS01890 (LZ756_01890) | 459772..460329 | - | 558 | WP_020852723.1 | phage tail protein I | - |
| LZ756_RS01895 (LZ756_01895) | 460322..461215 | - | 894 | WP_020850956.1 | baseplate J/gp47 family protein | - |
| LZ756_RS01900 (LZ756_01900) | 461215..461538 | - | 324 | WP_228304176.1 | GPW/gp25 family protein | - |
| LZ756_RS01905 (LZ756_01905) | 461703..461966 | + | 264 | WP_020853122.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LZ756_RS01910 (LZ756_01910) | 461953..462234 | + | 282 | WP_020853121.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LZ756_RS01915 (LZ756_01915) | 462271..462858 | - | 588 | WP_024748577.1 | phage baseplate assembly protein V | - |
| LZ756_RS01920 (LZ756_01920) | 462855..463397 | - | 543 | WP_020852726.1 | hypothetical protein | - |
| LZ756_RS01925 (LZ756_01925) | 463373..463894 | - | 522 | WP_020852727.1 | hypothetical protein | - |
| LZ756_RS01930 (LZ756_01930) | 463891..464214 | - | 324 | WP_234759353.1 | hypothetical protein | - |
| LZ756_RS01935 (LZ756_01935) | 464214..464474 | - | 261 | WP_020850964.1 | hypothetical protein | - |
| LZ756_RS01940 (LZ756_01940) | 464492..466366 | - | 1875 | WP_020850965.1 | phage major capsid protein | - |
| LZ756_RS01945 (LZ756_01945) | 466363..466995 | - | 633 | WP_020850966.1 | phage portal protein | - |
| LZ756_RS01950 (LZ756_01950) | 467001..467510 | + | 510 | WP_020850967.1 | hypothetical protein | - |
| LZ756_RS01955 (LZ756_01955) | 467507..467785 | + | 279 | WP_020850968.1 | VRR-NUC domain-containing protein | - |
| LZ756_RS01960 (LZ756_01960) | 467787..468077 | - | 291 | WP_038274391.1 | hypothetical protein | - |
| LZ756_RS01965 (LZ756_01965) | 468147..468563 | - | 417 | WP_020850970.1 | hypothetical protein | - |
| LZ756_RS01970 (LZ756_01970) | 468648..469112 | + | 465 | Protein_371 | SNF2-related protein | - |
| LZ756_RS01975 (LZ756_01975) | 469385..470026 | + | 642 | WP_020850972.1 | Chromosome-partitioning ATPase Soj | VF |
| LZ756_RS01980 (LZ756_01980) | 470054..470530 | + | 477 | WP_020850973.1 | histidine phosphatase family protein | - |
| LZ756_RS01985 (LZ756_01985) | 470535..471107 | + | 573 | WP_020850974.1 | YceI family protein | - |
| LZ756_RS01990 (LZ756_01990) | 471104..473062 | + | 1959 | WP_024749016.1 | phospholipase D family protein | - |
| LZ756_RS01995 (LZ756_01995) | 473995..474384 | - | 390 | WP_024749015.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|