MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP090545 Location: 2525812..2537897 Organism: Salmonella enterica strain 2017028-SE Replicon: chromosome
Accession: NZ_CP090545 Location: 2525812..2537897 Organism: Salmonella enterica strain 2017028-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F57_RS12435 (2521733) | 2521733..2522935 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L0F57_RS12440 (2522948) | 2522948..2524399 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L0F57_RS12445 (2524543) | 2524543..2525550 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L0F57_RS12450 (2525809) | 2525809..2527275 | + | 1467 | WP_234774424.1 | hypothetical protein | - |
| L0F57_RS12455 (2528083) | 2528083..2528797 | + | 715 | Protein_2442 | helix-turn-helix domain-containing protein | - |
| L0F57_RS12460 (2528853) | 2528853..2529761 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L0F57_RS12465 (2529904) | 2529904..2530236 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L0F57_RS12470 (2530226) | 2530226..2530441 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L0F57_RS12475 (2530593) | 2530593..2530841 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F57_RS12480 (2530831) | 2530831..2531115 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L0F57_RS12485 (2531286) | 2531286..2531675 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L0F57_RS12490 (2531727) | 2531727..2532806 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L0F57_RS12495 (2532999) | 2532999..2533487 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L0F57_RS12500 (2533532) | 2533532..2535040 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L0F57_RS12505 (2535030) | 2535030..2536271 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L0F57_RS12510 (2536341) | 2536341..2537897 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L0F57_RS12515 (2538074) | 2538074..2539360 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L0F57_RS12520 (2539335) | 2539335..2540360 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L0F57_RS12525 (2540419) | 2540419..2541210 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L0F57_RS12530 (2541256) | 2541256..2542347 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |