MGE detailed information
MGE type: Genomic_island MGE length: 12086 bp
Accession: NZ_CP090539 Location: 2529104..2541189 Organism: Salmonella enterica strain 2016062-SE Replicon: chromosome
Accession: NZ_CP090539 Location: 2529104..2541189 Organism: Salmonella enterica strain 2016062-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F59_RS12465 (2525025) | 2525025..2526227 | - | 1203 | WP_000347159.1 | MalY/PatB family protein | - |
| L0F59_RS12470 (2526240) | 2526240..2527691 | - | 1452 | WP_001276616.1 | Na+/H+ antiporter NhaC | - |
| L0F59_RS12475 (2527835) | 2527835..2528842 | - | 1008 | WP_000201080.1 | LacI family DNA-binding transcriptional regulator | - |
| L0F59_RS12480 (2529101) | 2529101..2530567 | + | 1467 | WP_000987828.1 | hypothetical protein | - |
| L0F59_RS12485 (2531375) | 2531375..2532089 | + | 715 | Protein_2449 | helix-turn-helix domain-containing protein | - |
| L0F59_RS12490 (2532145) | 2532145..2533053 | - | 909 | WP_010989018.1 | hypothetical protein | - |
| L0F59_RS12495 (2533196) | 2533196..2533528 | - | 333 | WP_000253154.1 | DUF1493 family protein | - |
| L0F59_RS12500 (2533518) | 2533518..2533733 | - | 216 | WP_000206207.1 | hypothetical protein | - |
| L0F59_RS12505 (2533885) | 2533885..2534133 | + | 249 | WP_000885424.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| L0F59_RS12510 (2534123) | 2534123..2534407 | + | 285 | WP_000221343.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| L0F59_RS12515 (2534578) | 2534578..2534967 | + | 390 | WP_000194089.1 | RidA family protein | - |
| L0F59_RS12520 (2535019) | 2535019..2536098 | - | 1080 | WP_000954688.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| L0F59_RS12525 (2536291) | 2536291..2536779 | - | 489 | WP_001293638.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| L0F59_RS12530 (2536824) | 2536824..2538332 | + | 1509 | WP_000199411.1 | FAD-dependent oxidoreductase | - |
| L0F59_RS12535 (2538322) | 2538322..2539563 | + | 1242 | WP_001095738.1 | MFS transporter | - |
| L0F59_RS12540 (2539633) | 2539633..2541189 | + | 1557 | WP_000476912.1 | PhoPQ-activated pathogenicity-related family protein | - |
| L0F59_RS12545 (2541366) | 2541366..2542652 | + | 1287 | WP_000824240.1 | MFS transporter | - |
| L0F59_RS12550 (2542627) | 2542627..2543652 | + | 1026 | WP_000864924.1 | zinc-binding alcohol dehydrogenase family protein | - |
| L0F59_RS12555 (2543711) | 2543711..2544502 | - | 792 | WP_001518759.1 | FadR/GntR family transcriptional regulator | - |
| L0F59_RS12560 (2544548) | 2544548..2545639 | - | 1092 | WP_000976498.1 | linear amide C-N hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297233 | UFRD01000002 | 1156436..1168519 | 0 |