MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP090529 Location: 1027601..1038027 Organism: Salmonella enterica strain 2008079-SE Replicon: chromosome
Accession: NZ_CP090529 Location: 1027601..1038027 Organism: Salmonella enterica strain 2008079-SE Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L0F60_RS04915 (1022714) | 1022714..1023094 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| L0F60_RS04920 (1023150) | 1023150..1025717 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| L0F60_RS04925 (1025876) | 1025876..1026397 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| L0F60_RS04930 (1026569) | 1026569..1027225 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| L0F60_RS04935 (1027572) | 1027572..1027777 | + | 206 | Protein_972 | IS5 family transposase ISEcl3 | Transposase |
| L0F60_RS04940 (1027850) | 1027850..1028377 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| L0F60_RS04945 (1028374) | 1028374..1028664 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| L0F60_RS04950 (1028934) | 1028934..1029112 | - | 179 | Protein_975 | IS3 family transposase | - |
| L0F60_RS04955 (1029353) | 1029353..1029679 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| L0F60_RS04960 (1029952) | 1029952..1030299 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| L0F60_RS04965 (1030284) | 1030284..1030733 | - | 450 | WP_000381610.1 | membrane protein | - |
| L0F60_RS04970 (1031164) | 1031164..1031607 | - | 444 | WP_000715092.1 | hypothetical protein | VF |
| L0F60_RS04975 (1032064) | 1032064..1032714 | + | 651 | WP_001674874.1 | hypothetical protein | VF |
| L0F60_RS04980 (1032711) | 1032711..1034399 | + | 1689 | WP_000848113.1 | hypothetical protein | VF |
| L0F60_RS04985 (1034396) | 1034396..1035514 | + | 1119 | WP_000612171.1 | hypothetical protein | VF |
| L0F60_RS04990 (1035539) | 1035539..1037596 | + | 2058 | WP_000927219.1 | hypothetical protein | VF |
| L0F60_RS04995 (1037620) | 1037620..1038027 | + | 408 | WP_001164066.1 | hypothetical protein | VF |
| L0F60_RS05000 (1038024) | 1038024..1039319 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| L0F60_RS05005 (1039297) | 1039297..1039740 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| L0F60_RS05010 (1039740) | 1039740..1040750 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| L0F60_RS05015 (1040750) | 1040750..1041661 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| L0F60_RS05020 (1041651) | 1041651..1042325 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| L0F60_RS05025 (1042351) | 1042351..1042611 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |