MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38602 bp
Accession: NZ_CP090524 Location: 1..38602 Organism: Xanthomonas citri pv. glycines strain ICMP5732 Replicon: plasmid pXAG39.ICMP5732
Accession: NZ_CP090524 Location: 1..38602 Organism: Xanthomonas citri pv. glycines strain ICMP5732 Replicon: plasmid pXAG39.ICMP5732
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LMJ37_RS23240 (LMJ37_23240) | 2..217 | - | 216 | Protein_0 | ribbon-helix-helix domain-containing protein | - |
| LMJ37_RS23245 (LMJ37_23245) | 429..973 | + | 545 | Protein_1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| LMJ37_RS23250 (LMJ37_23250) | 2259..3179 | - | 921 | WP_012477431.1 | replication protein RepA | - |
| LMJ37_RS23255 (LMJ37_23255) | 3245..3670 | - | 426 | WP_234746980.1 | serine protease | - |
| LMJ37_RS23260 (LMJ37_23260) | 3564..4052 | - | 489 | WP_234746984.1 | serine protease | - |
| LMJ37_RS23265 (LMJ37_23265) | 4049..4207 | - | 159 | WP_154666355.1 | hypothetical protein | - |
| LMJ37_RS23270 (LMJ37_23270) | 4430..4684 | - | 255 | WP_012477434.1 | hypothetical protein | - |
| LMJ37_RS23275 (LMJ37_23275) | 4684..5334 | - | 651 | WP_012477435.1 | ParA family protein | - |
| LMJ37_RS23280 (LMJ37_23280) | 5401..6046 | - | 646 | Protein_8 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LMJ37_RS23285 (LMJ37_23285) | 6043..6270 | - | 228 | WP_012477437.1 | hypothetical protein | - |
| LMJ37_RS23290 (LMJ37_23290) | 6536..6793 | + | 258 | WP_012477454.1 | plasmid stable inheritance protein I | Antitoxin Detail |
| LMJ37_RS23295 (LMJ37_23295) | 6793..7125 | + | 333 | WP_012477455.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| LMJ37_RS23300 (LMJ37_23300) | 7214..8032 | - | 819 | WP_012477456.1 | hypothetical protein | - |
| LMJ37_RS23305 (LMJ37_23305) | 8060..8647 | - | 588 | WP_234746982.1 | hypothetical protein | - |
| LMJ37_RS23310 (LMJ37_23310) | 9072..10235 | - | 1164 | WP_234746976.1 | Protein TraI | Relaxase |
| LMJ37_RS23315 (LMJ37_23315) | 10237..10539 | - | 303 | WP_012477458.1 | hypothetical protein | - |
| LMJ37_RS23320 (LMJ37_23320) | 10827..11186 | + | 360 | WP_234746978.1 | hypothetical protein | - |
| LMJ37_RS23325 (LMJ37_23325) | 11259..11939 | + | 681 | WP_012477460.1 | hypothetical protein | - |
| LMJ37_RS23330 (LMJ37_23330) | 11936..12526 | + | 591 | WP_012477461.1 | hypothetical protein | - |
| LMJ37_RS23335 (LMJ37_23335) | 12557..14089 | + | 1533 | WP_012477462.1 | type IV secretion system DNA-binding domain-containing protein | - |
| LMJ37_RS23340 (LMJ37_23340) | 14337..14720 | + | 384 | WP_012477463.1 | hypothetical protein | - |
| LMJ37_RS23345 (LMJ37_23345) | 14717..15427 | + | 711 | WP_012477464.1 | P-type DNA transfer protein VirB5 | - |
| LMJ37_RS23350 (LMJ37_23350) | 15424..15660 | + | 237 | WP_012477465.1 | EexN family lipoprotein | - |
| LMJ37_RS23355 (LMJ37_23355) | 15665..16705 | + | 1041 | WP_012477466.1 | type IV secretion system protein | - |
| LMJ37_RS23360 (LMJ37_23360) | 17058..17405 | - | 348 | Protein_24 | UPF0149 family protein | - |
| LMJ37_RS23365 (LMJ37_23365) | 17975..18238 | + | 264 | WP_016851366.1 | hypothetical protein | - |
| LMJ37_RS23370 (LMJ37_23370) | 18262..18495 | - | 234 | WP_124632126.1 | hypothetical protein | - |
| LMJ37_RS23375 (LMJ37_23375) | 18507..19139 | - | 633 | WP_157312978.1 | hypothetical protein | - |
| LMJ37_RS23380 (LMJ37_23380) | 19366..19824 | - | 459 | WP_016851367.1 | hypothetical protein | - |
| LMJ37_RS23390 (LMJ37_23390) | 21332..25030 | + | 3699 | Protein_30 | type III secretion system effector avirulence protein AvrBs3 | - |
| LMJ37_RS23395 (LMJ37_23395) | 25141..25596 | + | 456 | Protein_31 | avirulence protein | - |
| LMJ37_RS23400 (LMJ37_23400) | 25893..26144 | - | 252 | Protein_32 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| LMJ37_RS23405 (LMJ37_23405) | 26149..26568 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| LMJ37_RS23410 (LMJ37_23410) | 26568..26807 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| LMJ37_RS23415 (LMJ37_23415) | 27019..27942 | + | 924 | WP_012477429.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| LMJ37_RS23420 (LMJ37_23420) | 28878..29866 | - | 989 | Protein_36 | replication protein RepA | - |
| LMJ37_RS23425 (LMJ37_23425) | 29863..30669 | - | 807 | WP_016851361.1 | serine protease | - |
| LMJ37_RS23430 (LMJ37_23430) | 30666..30824 | - | 159 | WP_154666355.1 | hypothetical protein | - |
| LMJ37_RS23435 (LMJ37_23435) | 31047..31301 | - | 255 | WP_012477434.1 | hypothetical protein | - |
| LMJ37_RS23440 (LMJ37_23440) | 31301..31951 | - | 651 | WP_012477435.1 | ParA family protein | - |
| LMJ37_RS23445 (LMJ37_23445) | 32018..32662 | - | 645 | WP_012477436.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LMJ37_RS23450 (LMJ37_23450) | 32659..32886 | - | 228 | WP_012477437.1 | hypothetical protein | - |
| LMJ37_RS23455 (LMJ37_23455) | 33152..33408 | + | 257 | Protein_43 | antitoxin | - |
| LMJ37_RS23460 (LMJ37_23460) | 33408..33740 | + | 333 | WP_012477455.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| LMJ37_RS23465 (LMJ37_23465) | 33828..34646 | - | 819 | WP_012477456.1 | hypothetical protein | - |
| LMJ37_RS23470 (LMJ37_23470) | 34674..35306 | - | 633 | WP_234746972.1 | hypothetical protein | - |
| LMJ37_RS23475 (LMJ37_23475) | 35303..36850 | - | 1548 | WP_234746974.1 | Protein TraI | Relaxase |
| LMJ37_RS23480 (LMJ37_23480) | 36852..37154 | - | 303 | WP_012477458.1 | hypothetical protein | - |
| LMJ37_RS23485 (LMJ37_23485) | 37443..37862 | + | 420 | WP_012477459.1 | hypothetical protein | - |
| LMJ37_RS23490 (LMJ37_23490) | 37876..38556 | + | 681 | WP_012477460.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|