MGE detailed information
MGE type: Prophage MGE length: 46723 bp
Accession: NZ_CP090514 Location: 1290513..1337235 Organism: Xylella fastidiosa subsp. fastidiosa strain Riv13 Replicon: chromosome
Accession: NZ_CP090514 Location: 1290513..1337235 Organism: Xylella fastidiosa subsp. fastidiosa strain Riv13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ753_RS05715 (LZ753_05715) | 1285841..1286626 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| LZ753_RS05720 (LZ753_05720) | 1286663..1289269 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| LZ753_RS05725 (LZ753_05725) | 1289702..1290433 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| LZ753_RS05730 (LZ753_05730) | 1290513..1291373 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| LZ753_RS05735 (LZ753_05735) | 1291527..1292396 | + | 870 | WP_014607779.1 | hypothetical protein | - |
| LZ753_RS05745 (LZ753_05745) | 1293169..1293513 | - | 345 | WP_004084923.1 | RidA family protein | - |
| LZ753_RS05750 (LZ753_05750) | 1293716..1293991 | - | 276 | WP_228446138.1 | helix-turn-helix domain-containing protein | - |
| LZ753_RS05755 (LZ753_05755) | 1294240..1295322 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| LZ753_RS05760 (LZ753_05760) | 1295313..1295531 | - | 219 | WP_004088371.1 | tail protein X | - |
| LZ753_RS05765 (LZ753_05765) | 1295528..1296010 | - | 483 | WP_011097928.1 | phage tail protein | - |
| LZ753_RS05770 (LZ753_05770) | 1296007..1298262 | - | 2256 | WP_228446139.1 | phage tail tape measure protein | - |
| LZ753_RS05775 (LZ753_05775) | 1298353..1298640 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| LZ753_RS05780 (LZ753_05780) | 1298643..1299152 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| LZ753_RS05785 (LZ753_05785) | 1299152..1300330 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| LZ753_RS05790 (LZ753_05790) | 1300395..1301987 | - | 1593 | WP_011097932.1 | tail fiber domain-containing protein | - |
| LZ753_RS05795 (LZ753_05795) | 1301995..1302552 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| LZ753_RS05800 (LZ753_05800) | 1302545..1303438 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| LZ753_RS05805 (LZ753_05805) | 1303438..1303800 | - | 363 | WP_014607615.1 | GPW/gp25 family protein | - |
| LZ753_RS05810 (LZ753_05810) | 1303926..1304189 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LZ753_RS05815 (LZ753_05815) | 1304176..1304457 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LZ753_RS05820 (LZ753_05820) | 1304494..1305081 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| LZ753_RS05825 (LZ753_05825) | 1305078..1305620 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| LZ753_RS05830 (LZ753_05830) | 1305596..1306117 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| LZ753_RS05835 (LZ753_05835) | 1306114..1306437 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| LZ753_RS05840 (LZ753_05840) | 1306437..1306697 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| LZ753_RS05845 (LZ753_05845) | 1306715..1308589 | - | 1875 | WP_011097936.1 | phage major capsid protein | - |
| LZ753_RS05850 (LZ753_05850) | 1308645..1310171 | - | 1527 | WP_011097937.1 | phage portal protein | - |
| LZ753_RS05855 (LZ753_05855) | 1310168..1310719 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| LZ753_RS05860 (LZ753_05860) | 1310723..1312675 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| LZ753_RS05865 (LZ753_05865) | 1312668..1313201 | - | 534 | WP_004088896.1 | terminase small subunit | - |
| LZ753_RS05870 (LZ753_05870) | 1313374..1313598 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| LZ753_RS05875 (LZ753_05875) | 1313600..1314061 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| LZ753_RS05880 (LZ753_05880) | 1314051..1314380 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| LZ753_RS05885 (LZ753_05885) | 1314373..1314867 | - | 495 | WP_011097941.1 | lysozyme | - |
| LZ753_RS05890 (LZ753_05890) | 1314834..1315451 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| LZ753_RS05895 (LZ753_05895) | 1315870..1318401 | - | 2532 | WP_012382624.1 | phage/plasmid primase, P4 family | - |
| LZ753_RS05900 (LZ753_05900) | 1318537..1319103 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| LZ753_RS05905 (LZ753_05905) | 1319100..1319486 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| LZ753_RS05910 (LZ753_05910) | 1319483..1319869 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| LZ753_RS05915 (LZ753_05915) | 1319866..1320252 | - | 387 | WP_011097947.1 | phage antirepressor | - |
| LZ753_RS05920 (LZ753_05920) | 1320249..1320635 | - | 387 | WP_012382625.1 | phage antirepressor | - |
| LZ753_RS05925 (LZ753_05925) | 1320632..1320895 | - | 264 | WP_228446140.1 | hypothetical protein | - |
| LZ753_RS05930 (LZ753_05930) | 1321120..1321365 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| LZ753_RS05935 (LZ753_05935) | 1321426..1321641 | - | 216 | WP_012382628.1 | hypothetical protein | - |
| LZ753_RS05940 (LZ753_05940) | 1321671..1321859 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| LZ753_RS05945 (LZ753_05945) | 1321913..1322089 | - | 177 | WP_174851808.1 | hypothetical protein | - |
| LZ753_RS05950 (LZ753_05950) | 1322469..1322729 | - | 261 | WP_012382631.1 | YdaS family helix-turn-helix protein | - |
| LZ753_RS05955 (LZ753_05955) | 1322815..1323573 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| LZ753_RS05960 (LZ753_05960) | 1323734..1324273 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| LZ753_RS05965 (LZ753_05965) | 1324296..1324505 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| LZ753_RS05970 (LZ753_05970) | 1324502..1324942 | + | 441 | WP_011097954.1 | hypothetical protein | - |
| LZ753_RS05975 (LZ753_05975) | 1325160..1325549 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| LZ753_RS05980 (LZ753_05980) | 1325546..1326010 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| LZ753_RS05985 (LZ753_05985) | 1326067..1326657 | - | 591 | WP_225621683.1 | hypothetical protein | - |
| LZ753_RS05990 (LZ753_05990) | 1326849..1327040 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| LZ753_RS05995 (LZ753_05995) | 1327064..1327255 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| LZ753_RS06000 (LZ753_06000) | 1327287..1327484 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| LZ753_RS06005 (LZ753_06005) | 1327471..1327968 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| LZ753_RS06010 (LZ753_06010) | 1327965..1329242 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| LZ753_RS06015 (LZ753_06015) | 1329242..1329808 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| LZ753_RS06020 (LZ753_06020) | 1329799..1331406 | + | 1608 | WP_012382638.1 | BRO family protein | - |
| LZ753_RS06025 (LZ753_06025) | 1331408..1332466 | + | 1059 | WP_234502173.1 | hypothetical protein | - |
| LZ753_RS06030 (LZ753_06030) | 1332471..1333589 | + | 1119 | WP_234502175.1 | DNA polymerase | - |
| LZ753_RS06035 (LZ753_06035) | 1333586..1333864 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| LZ753_RS06040 (LZ753_06040) | 1333866..1334312 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| LZ753_RS06045 (LZ753_06045) | 1334397..1335815 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| LZ753_RS06050 (LZ753_06050) | 1335812..1335976 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| LZ753_RS06055 (LZ753_06055) | 1335969..1336226 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| LZ753_RS06060 (LZ753_06060) | 1336216..1337235 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LZ753_RS06065 (LZ753_06065) | 1337599..1340190 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|