MGE detailed information
MGE type: Prophage MGE length: 38940 bp
Accession: NZ_CP090511 Location: 446613..485552 Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874 Replicon: chromosome
Accession: NZ_CP090511 Location: 446613..485552 Organism: Xylella fastidiosa subsp. multiplex strain Oak 35874 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ754_RS01805 (LZ754_01805) | 441985..443775 | + | 1791 | WP_004085196.1 | succinate dehydrogenase flavoprotein subunit | - |
| LZ754_RS01810 (LZ754_01810) | 443796..444581 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| LZ754_RS01815 (LZ754_01815) | 444702..444950 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| LZ754_RS01820 (LZ754_01820) | 444901..445353 | + | 453 | WP_004089278.1 | hypothetical protein | - |
| LZ754_RS01825 (LZ754_01825) | 445379..446620 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| LZ754_RS01830 (LZ754_01830) | 446613..447335 | + | 723 | WP_004085191.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| LZ754_RS01835 (LZ754_01835) | 447683..450160 | + | 2478 | WP_027700427.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| LZ754_RS01840 (LZ754_01840) | 450145..450807 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| LZ754_RS01845 (LZ754_01845) | 450812..451249 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| LZ754_RS01850 (LZ754_01850) | 451267..453015 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| LZ754_RS01855 (LZ754_01855) | 453012..454031 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| LZ754_RS01860 (LZ754_01860) | 454440..455522 | - | 1083 | WP_038210511.1 | phage late control D family protein | - |
| LZ754_RS01865 (LZ754_01865) | 455513..455731 | - | 219 | WP_038210509.1 | tail protein X | - |
| LZ754_RS01870 (LZ754_01870) | 455728..456210 | - | 483 | WP_012337636.1 | phage tail protein | - |
| LZ754_RS01875 (LZ754_01875) | 456207..458462 | - | 2256 | WP_234499692.1 | phage tail tape measure protein | - |
| LZ754_RS01880 (LZ754_01880) | 458553..458840 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| LZ754_RS01885 (LZ754_01885) | 458843..459352 | - | 510 | WP_027700433.1 | phage major tail tube protein | - |
| LZ754_RS01890 (LZ754_01890) | 459352..459639 | - | 288 | WP_234499982.1 | phage tail sheath C-terminal domain-containing protein | - |
| LZ754_RS01895 (LZ754_01895) | 459528..460529 | - | 1002 | WP_234499691.1 | phage tail sheath family protein | - |
| LZ754_RS01900 (LZ754_01900) | 460594..462186 | - | 1593 | WP_234499690.1 | phage tail protein | - |
| LZ754_RS01905 (LZ754_01905) | 462194..462751 | - | 558 | WP_038210530.1 | phage tail protein I | - |
| LZ754_RS01910 (LZ754_01910) | 462744..463637 | - | 894 | WP_154128227.1 | baseplate J/gp47 family protein | - |
| LZ754_RS01915 (LZ754_01915) | 463637..463960 | - | 324 | WP_230577675.1 | GPW/gp25 family protein | - |
| LZ754_RS01920 (LZ754_01920) | 464109..464423 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LZ754_RS01925 (LZ754_01925) | 464425..464706 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| LZ754_RS01930 (LZ754_01930) | 464718..465017 | + | 300 | WP_004087025.1 | HigA family addiction module antitoxin | - |
| LZ754_RS01935 (LZ754_01935) | 465022..465609 | - | 588 | WP_234499689.1 | phage baseplate assembly protein V | - |
| LZ754_RS01940 (LZ754_01940) | 465606..466148 | - | 543 | WP_038210495.1 | hypothetical protein | - |
| LZ754_RS01945 (LZ754_01945) | 466124..466645 | - | 522 | WP_038210493.1 | hypothetical protein | - |
| LZ754_RS01950 (LZ754_01950) | 466642..466965 | - | 324 | WP_038210491.1 | hypothetical protein | - |
| LZ754_RS01955 (LZ754_01955) | 466965..467225 | - | 261 | WP_038210489.1 | hypothetical protein | - |
| LZ754_RS01960 (LZ754_01960) | 467243..469117 | - | 1875 | WP_234499872.1 | phage major capsid protein | - |
| LZ754_RS01965 (LZ754_01965) | 469114..470700 | - | 1587 | WP_234499687.1 | phage portal protein | - |
| LZ754_RS01970 (LZ754_01970) | 470711..471244 | - | 534 | WP_234499873.1 | hypothetical protein | - |
| LZ754_RS01975 (LZ754_01975) | 471248..473200 | - | 1953 | WP_038210483.1 | phage terminase large subunit family protein | - |
| LZ754_RS01980 (LZ754_01980) | 473193..473726 | - | 534 | WP_050765457.1 | terminase small subunit | - |
| LZ754_RS01985 (LZ754_01985) | 473899..474123 | - | 225 | WP_038230183.1 | hypothetical protein | - |
| LZ754_RS01990 (LZ754_01990) | 474125..474586 | - | 462 | WP_038211744.1 | hypothetical protein | - |
| LZ754_RS01995 (LZ754_01995) | 474576..474905 | - | 330 | WP_004085022.1 | phage holin family protein | - |
| LZ754_RS02000 (LZ754_02000) | 474898..475398 | - | 501 | WP_234499714.1 | lysozyme | - |
| LZ754_RS02005 (LZ754_02005) | 475498..476229 | - | 732 | WP_234499874.1 | site-specific DNA-methyltransferase | - |
| LZ754_RS02010 (LZ754_02010) | 476419..476754 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LZ754_RS02015 (LZ754_02015) | 476751..477005 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LZ754_RS02020 (LZ754_02020) | 477085..477780 | - | 696 | Protein_384 | hypothetical protein | - |
| LZ754_RS02025 (LZ754_02025) | 477723..478070 | - | 348 | WP_160168467.1 | hypothetical protein | - |
| LZ754_RS02030 (LZ754_02030) | 478259..479527 | + | 1269 | WP_080715089.1 | DNA polymerase | - |
| LZ754_RS02035 (LZ754_02035) | 479527..479802 | + | 276 | WP_234499712.1 | VRR-NUC domain-containing protein | - |
| LZ754_RS02040 (LZ754_02040) | 479804..480130 | - | 327 | WP_004083464.1 | hypothetical protein | - |
| LZ754_RS02045 (LZ754_02045) | 480215..481633 | + | 1419 | WP_234499875.1 | DEAD/DEAH box helicase | - |
| LZ754_RS02050 (LZ754_02050) | 481630..481794 | + | 165 | WP_200873170.1 | hypothetical protein | - |
| LZ754_RS02055 (LZ754_02055) | 481787..482035 | + | 249 | WP_038211755.1 | DUF4224 domain-containing protein | - |
| LZ754_RS02060 (LZ754_02060) | 482035..483054 | + | 1020 | WP_038211772.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LZ754_RS02065 (LZ754_02065) | 483830..484471 | + | 642 | WP_027700077.1 | Chromosome-partitioning ATPase Soj | VF |
| LZ754_RS02070 (LZ754_02070) | 484499..484975 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| LZ754_RS02075 (LZ754_02075) | 484980..485552 | + | 573 | WP_004085682.1 | YceI family protein | - |
| LZ754_RS02080 (LZ754_02080) | 485549..487507 | + | 1959 | WP_038210463.1 | phospholipase D family protein | - |
| LZ754_RS02085 (LZ754_02085) | 488490..488882 | - | 393 | WP_071869548.1 | helix-turn-helix transcriptional regulator | - |
| LZ754_RS02090 (LZ754_02090) | 489216..489512 | + | 297 | WP_004085727.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|