MGE detailed information
MGE type: Prophage MGE length: 48730 bp
Accession: NZ_CP090510 Location: 434814..483543 Organism: Xylella fastidiosa subsp. multiplex strain LA-Y3C Replicon: chromosome
Accession: NZ_CP090510 Location: 434814..483543 Organism: Xylella fastidiosa subsp. multiplex strain LA-Y3C Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ759_RS01720 (LZ759_01720) | 430276..430935 | - | 660 | WP_004085204.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LZ759_RS01725 (LZ759_01725) | 431032..432948 | - | 1917 | WP_004085203.1 | phosphogluconate dehydratase | - |
| LZ759_RS01730 (LZ759_01730) | 433088..433807 | - | 720 | WP_004085202.1 | 6-phosphogluconolactonase | - |
| LZ759_RS01735 (LZ759_01735) | 433804..434817 | - | 1014 | WP_004085201.1 | glucokinase | - |
| LZ759_RS01740 (LZ759_01740) | 434814..436316 | - | 1503 | WP_004085200.1 | glucose-6-phosphate dehydrogenase | - |
| LZ759_RS01745 (LZ759_01745) | 436576..437670 | + | 1095 | WP_012337631.1 | sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC | - |
| LZ759_RS01750 (LZ759_01750) | 437815..438618 | - | 804 | WP_004085198.1 | folate-binding protein YgfZ | - |
| LZ759_RS01755 (LZ759_01755) | 438971..439135 | + | 165 | WP_071869476.1 | DUF1674 domain-containing protein | - |
| LZ759_RS01760 (LZ759_01760) | 439193..439615 | + | 423 | WP_021358463.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| LZ759_RS01765 (LZ759_01765) | 439612..439995 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| LZ759_RS01770 (LZ759_01770) | 440003..441793 | + | 1791 | WP_071869468.1 | succinate dehydrogenase flavoprotein subunit | - |
| LZ759_RS01775 (LZ759_01775) | 441814..442599 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| LZ759_RS01780 (LZ759_01780) | 442720..442968 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| LZ759_RS01785 (LZ759_01785) | 442991..443371 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| LZ759_RS01790 (LZ759_01790) | 443397..444638 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| LZ759_RS01795 (LZ759_01795) | 444631..445353 | + | 723 | WP_038230153.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| LZ759_RS01800 (LZ759_01800) | 445701..448178 | + | 2478 | WP_071869475.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| LZ759_RS01805 (LZ759_01805) | 448163..448825 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| LZ759_RS01810 (LZ759_01810) | 448830..449267 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| LZ759_RS01815 (LZ759_01815) | 449285..451033 | + | 1749 | WP_004085187.1 | lipid A export permease/ATP-binding protein MsbA | - |
| LZ759_RS01820 (LZ759_01820) | 451030..452049 | + | 1020 | WP_004085186.1 | tetraacyldisaccharide 4'-kinase | - |
| LZ759_RS01825 (LZ759_01825) | 452424..453506 | - | 1083 | WP_234545825.1 | phage late control D family protein | - |
| LZ759_RS01830 (LZ759_01830) | 453497..453715 | - | 219 | WP_004088371.1 | tail protein X | - |
| LZ759_RS01835 (LZ759_01835) | 453712..454194 | - | 483 | WP_011097928.1 | phage tail protein | - |
| LZ759_RS01840 (LZ759_01840) | 454191..456446 | - | 2256 | WP_234545826.1 | phage tail tape measure protein | - |
| LZ759_RS01845 (LZ759_01845) | 456537..456824 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| LZ759_RS01850 (LZ759_01850) | 456827..457336 | - | 510 | WP_027700433.1 | phage major tail tube protein | - |
| LZ759_RS01855 (LZ759_01855) | 457336..458514 | - | 1179 | WP_038230457.1 | phage tail sheath family protein | - |
| LZ759_RS01860 (LZ759_01860) | 458579..460171 | - | 1593 | WP_234545827.1 | hypothetical protein | - |
| LZ759_RS01865 (LZ759_01865) | 460179..460736 | - | 558 | WP_234545828.1 | phage tail protein I | - |
| LZ759_RS01870 (LZ759_01870) | 460729..461622 | - | 894 | WP_154128227.1 | baseplate J/gp47 family protein | - |
| LZ759_RS01875 (LZ759_01875) | 461622..461945 | - | 324 | WP_230577675.1 | GPW/gp25 family protein | - |
| LZ759_RS01880 (LZ759_01880) | 462094..462408 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LZ759_RS01885 (LZ759_01885) | 462410..462691 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| LZ759_RS01890 (LZ759_01890) | 462703..463002 | + | 300 | WP_080566203.1 | HigA family addiction module antitoxin | - |
| LZ759_RS01895 (LZ759_01895) | 463007..463594 | - | 588 | WP_154414963.1 | phage baseplate assembly protein V | - |
| LZ759_RS01900 (LZ759_01900) | 463591..464133 | - | 543 | WP_038210495.1 | hypothetical protein | - |
| LZ759_RS01905 (LZ759_01905) | 464109..464630 | - | 522 | WP_234545829.1 | hypothetical protein | - |
| LZ759_RS01910 (LZ759_01910) | 464627..464950 | - | 324 | WP_071869459.1 | hypothetical protein | - |
| LZ759_RS01915 (LZ759_01915) | 464950..465210 | - | 261 | WP_234545830.1 | hypothetical protein | - |
| LZ759_RS01920 (LZ759_01920) | 465228..467102 | - | 1875 | WP_234545831.1 | phage major capsid protein | - |
| LZ759_RS01925 (LZ759_01925) | 467099..468688 | - | 1590 | WP_234545832.1 | phage portal protein | - |
| LZ759_RS01930 (LZ759_01930) | 468685..469236 | - | 552 | WP_234545834.1 | hypothetical protein | - |
| LZ759_RS01935 (LZ759_01935) | 469240..471192 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| LZ759_RS01940 (LZ759_01940) | 471185..471718 | - | 534 | WP_004088896.1 | terminase small subunit | - |
| LZ759_RS01945 (LZ759_01945) | 471891..472115 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| LZ759_RS01950 (LZ759_01950) | 472117..472578 | - | 462 | WP_140162026.1 | hypothetical protein | - |
| LZ759_RS01955 (LZ759_01955) | 472568..472897 | - | 330 | WP_004085022.1 | phage holin family protein | - |
| LZ759_RS01960 (LZ759_01960) | 472890..473390 | - | 501 | WP_234545836.1 | lysozyme | - |
| LZ759_RS01965 (LZ759_01965) | 473489..474220 | - | 732 | WP_140160983.1 | site-specific DNA-methyltransferase | - |
| LZ759_RS01970 (LZ759_01970) | 474410..474745 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| LZ759_RS01975 (LZ759_01975) | 474742..474996 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| LZ759_RS01980 (LZ759_01980) | 475076..475771 | - | 696 | Protein_375 | hypothetical protein | - |
| LZ759_RS01985 (LZ759_01985) | 476115..476273 | + | 159 | WP_234545837.1 | hypothetical protein | - |
| LZ759_RS01990 (LZ759_01990) | 476375..477517 | + | 1143 | WP_234545838.1 | DNA polymerase | - |
| LZ759_RS01995 (LZ759_01995) | 477517..477792 | + | 276 | WP_228304208.1 | VRR-NUC domain-containing protein | - |
| LZ759_RS02000 (LZ759_02000) | 477794..478120 | - | 327 | WP_004083464.1 | hypothetical protein | - |
| LZ759_RS02005 (LZ759_02005) | 478206..479624 | + | 1419 | WP_234545839.1 | DEAD/DEAH box helicase | - |
| LZ759_RS02010 (LZ759_02010) | 479621..479785 | + | 165 | WP_169709885.1 | hypothetical protein | - |
| LZ759_RS02015 (LZ759_02015) | 479778..480026 | + | 249 | WP_004086191.1 | DUF4224 domain-containing protein | - |
| LZ759_RS02020 (LZ759_02020) | 480026..481045 | + | 1020 | WP_234545840.1 | tyrosine-type recombinase/integrase | - |
| LZ759_RS02025 (LZ759_02025) | 481821..482462 | + | 642 | WP_027700077.1 | ParA family protein | - |
| LZ759_RS02030 (LZ759_02030) | 482490..482966 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| LZ759_RS02035 (LZ759_02035) | 482971..483543 | + | 573 | WP_004085682.1 | YceI family protein | - |
| LZ759_RS02040 (LZ759_02040) | 483540..485498 | + | 1959 | WP_038210463.1 | phospholipase D family protein | - |
| LZ759_RS02045 (LZ759_02045) | 486486..486878 | - | 393 | WP_071869548.1 | helix-turn-helix transcriptional regulator | - |
| LZ759_RS02050 (LZ759_02050) | 487212..487484 | + | 273 | WP_038210462.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|