MGE detailed information
MGE type: Prophage MGE length: 32839 bp
Accession: NZ_CP090508 Location: 2072823..2105661 Organism: Xylella fastidiosa subsp. morus strain Riv11 Replicon: chromosome
Accession: NZ_CP090508 Location: 2072823..2105661 Organism: Xylella fastidiosa subsp. morus strain Riv11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ758_RS09675 (LZ758_09675) | 2069548..2069937 | + | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
| LZ758_RS09680 (LZ758_09680) | 2070868..2072826 | - | 1959 | WP_038228798.1 | phospholipase D family protein | - |
| LZ758_RS09685 (LZ758_09685) | 2072823..2073395 | - | 573 | WP_038228796.1 | YceI family protein | - |
| LZ758_RS09690 (LZ758_09690) | 2073400..2073876 | - | 477 | WP_038228794.1 | histidine phosphatase family protein | - |
| LZ758_RS09695 (LZ758_09695) | 2073904..2074545 | - | 642 | WP_038228792.1 | Chromosome-partitioning ATPase Soj | VF |
| LZ758_RS09700 (LZ758_09700) | 2075299..2076318 | - | 1020 | WP_038230604.1 | hypothetical protein ; Integrase | Integrase |
| LZ758_RS09705 (LZ758_09705) | 2076308..2076562 | - | 255 | WP_234056274.1 | DUF4224 domain-containing protein | - |
| LZ758_RS09710 (LZ758_09710) | 2076559..2077977 | - | 1419 | WP_234056273.1 | DEAD/DEAH box helicase | - |
| LZ758_RS09715 (LZ758_09715) | 2078062..2078424 | + | 363 | WP_234056272.1 | DUF1640 domain-containing protein | - |
| LZ758_RS12270 | 2078426..2078554 | - | 129 | WP_267959500.1 | hypothetical protein | - |
| LZ758_RS09720 (LZ758_09720) | 2078699..2079208 | - | 510 | WP_234056271.1 | hypothetical protein | - |
| LZ758_RS09725 (LZ758_09725) | 2079214..2079846 | + | 633 | WP_040123076.1 | phage portal protein | - |
| LZ758_RS09730 (LZ758_09730) | 2079843..2080847 | + | 1005 | WP_234509070.1 | HK97 family phage prohead protease | - |
| LZ758_RS09735 (LZ758_09735) | 2080916..2081716 | + | 801 | WP_234509132.1 | phage major capsid protein | - |
| LZ758_RS09740 (LZ758_09740) | 2081734..2081994 | + | 261 | WP_027700442.1 | hypothetical protein | - |
| LZ758_RS09745 (LZ758_09745) | 2081994..2082317 | + | 324 | WP_027700441.1 | hypothetical protein | - |
| LZ758_RS09750 (LZ758_09750) | 2082314..2082835 | + | 522 | WP_038230165.1 | hypothetical protein | - |
| LZ758_RS09755 (LZ758_09755) | 2082811..2083353 | + | 543 | WP_038230164.1 | hypothetical protein | - |
| LZ758_RS09760 (LZ758_09760) | 2083350..2083937 | + | 588 | WP_038230163.1 | phage baseplate assembly protein V | - |
| LZ758_RS09765 (LZ758_09765) | 2083974..2084255 | - | 282 | WP_038230161.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LZ758_RS09770 (LZ758_09770) | 2084242..2084505 | - | 264 | WP_004086967.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LZ758_RS09775 (LZ758_09775) | 2084669..2084992 | + | 324 | WP_228304176.1 | GPW/gp25 family protein | - |
| LZ758_RS09780 (LZ758_09780) | 2084992..2085885 | + | 894 | WP_038230566.1 | baseplate J/gp47 family protein | - |
| LZ758_RS09785 (LZ758_09785) | 2085878..2086435 | + | 558 | WP_027700436.1 | phage tail protein I | - |
| LZ758_RS09790 (LZ758_09790) | 2086443..2087414 | + | 972 | WP_234056270.1 | phage tail protein | - |
| LZ758_RS09795 (LZ758_09795) | 2087332..2088021 | + | 690 | WP_230577660.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| LZ758_RS09800 (LZ758_09800) | 2088437..2089456 | - | 1020 | WP_038230156.1 | Tetraacyldisaccharide 4'-kinase | VF |
| LZ758_RS09805 (LZ758_09805) | 2089453..2091201 | - | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| LZ758_RS09810 (LZ758_09810) | 2091219..2091656 | - | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| LZ758_RS09815 (LZ758_09815) | 2091661..2092323 | - | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| LZ758_RS09820 (LZ758_09820) | 2092308..2094785 | - | 2478 | WP_234056436.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| LZ758_RS09825 (LZ758_09825) | 2095133..2095855 | - | 723 | WP_038230153.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| LZ758_RS09830 (LZ758_09830) | 2095848..2097089 | - | 1242 | WP_038230151.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| LZ758_RS09835 (LZ758_09835) | 2097115..2097486 | - | 372 | WP_234056268.1 | hypothetical protein | - |
| LZ758_RS09840 (LZ758_09840) | 2097518..2097766 | - | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| LZ758_RS09845 (LZ758_09845) | 2097887..2098672 | - | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| LZ758_RS09850 (LZ758_09850) | 2098693..2100483 | - | 1791 | WP_040123071.1 | succinate dehydrogenase flavoprotein subunit | - |
| LZ758_RS09855 (LZ758_09855) | 2100491..2100874 | - | 384 | WP_004089286.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| LZ758_RS09860 (LZ758_09860) | 2100871..2101266 | - | 396 | WP_038230145.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| LZ758_RS09865 (LZ758_09865) | 2101324..2101488 | - | 165 | WP_072866360.1 | DUF1674 domain-containing protein | - |
| LZ758_RS09870 (LZ758_09870) | 2101800..2102660 | + | 861 | WP_228446161.1 | folate-binding protein YgfZ | - |
| LZ758_RS09875 (LZ758_09875) | 2102805..2103899 | - | 1095 | WP_038230143.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| LZ758_RS09880 (LZ758_09880) | 2104159..2105661 | + | 1503 | WP_230577659.1 | glucose-6-phosphate dehydrogenase | - |
| LZ758_RS09885 (LZ758_09885) | 2105658..2106671 | + | 1014 | WP_038230138.1 | glucokinase | - |
| LZ758_RS09890 (LZ758_09890) | 2106668..2107387 | + | 720 | WP_038230136.1 | 6-phosphogluconolactonase | - |
| LZ758_RS09895 (LZ758_09895) | 2107528..2109444 | + | 1917 | WP_038230135.1 | phosphogluconate dehydratase | - |
| LZ758_RS09900 (LZ758_09900) | 2109541..2110200 | + | 660 | WP_038230133.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|