MGE detailed information
MGE type: IScluster/Tn MGE length: 57303 bp
Accession: NZ_CP090458 Location: 1105..58407 Organism: Escherichia coli strain B379 Replicon: plasmid pB379_3
Accession: NZ_CP090458 Location: 1105..58407 Organism: Escherichia coli strain B379 Replicon: plasmid pB379_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ684_RS23840 (1) | 1..858 | + | 858 | WP_000130646.1 | incFII family plasmid replication initiator RepA | - |
| LZ684_RS23845 (1075) | 1075..1752 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| LZ684_RS23850 (1752) | 1752..2099 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| LZ684_RS23855 (2119) | 2119..3690 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| LZ684_RS23860 (4504) | 4504..5157 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| LZ684_RS23865 (5250) | 5250..5507 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| LZ684_RS23870 (5440) | 5440..5841 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| LZ684_RS23875 (6090) | 6090..6505 | + | 416 | Protein_7 | IS1-like element IS1B family transposase | - |
| LZ684_RS23880 (6541) | 6541..7086 | - | 546 | Protein_8 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LZ684_RS23885 (7152) | 7152..7856 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LZ684_RS23890 (7991) | 7991..8086 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| LZ684_RS23895 (8212) | 8212..8949 | + | 738 | WP_013362818.1 | Ribosomal RNA small subunit methyltransferase A | ARG |
| LZ684_RS23900 (9579) | 9579..10028 | + | 450 | WP_013362817.1 | hypothetical protein | - |
| LZ684_RS23905 (9989) | 9989..10330 | + | 342 | WP_023909256.1 | 60 kDa chaperonin | VF |
| LZ684_RS23910 (10605) | 10605..12089 | + | 1485 | WP_194280410.1 | IS91 family transposase ISVsa3 | Transposase |
| LZ684_RS23915 (12412) | 12412..13116 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LZ684_RS23920 (13182) | 13182..13469 | + | 288 | Protein_16 | IS1380 family transposase ISEcp1 | Transposase |
| LZ684_RS23925 (13719) | 13719..14594 | + | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| LZ684_RS23930 (14629) | 14629..15597 | + | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| LZ684_RS23935 (15654) | 15654..16226 | - | 573 | Protein_19 | IS1380 family transposase ISEcp1 | Transposase |
| LZ684_RS23940 (16427) | 16427..17458 | + | 1032 | WP_014342102.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| LZ684_RS23945 (17647) | 17647..17856 | - | 210 | Protein_21 | dihydropteroate synthase | - |
| LZ684_RS23950 (17850) | 17850..18197 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| LZ684_RS23955 (18389) | 18389..19648 | - | 1260 | WP_234679454.1 | Multidrug resistance protein MdtL | ARG |
| LZ684_RS23960 (19915) | 19915..20469 | - | 555 | WP_032488579.1 | aminoglycoside N-acetyltransferase AAC(6')-Ib3 | - |
| LZ684_RS23965 (20649) | 20649..21329 | + | 681 | Protein_25 | IS91 family transposase ISAzo26 | Transposase |
| LZ684_RS23970 (21394) | 21394..22098 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LZ684_RS23975 (22210) | 22210..22914 | + | 705 | WP_032199621.1 | IS6 family transposase IS26 | Transposase |
| LZ684_RS23980 (22969) | 22969..23652 | + | 684 | Protein_28 | helicase RepA family protein | - |
| LZ684_RS23985 (23639) | 23639..24490 | + | 852 | WP_000240536.1 | replication protein C, IncQ-type | - |
| LZ684_RS23990 (24798) | 24798..25613 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| LZ684_RS23995 (25700) | 25700..25942 | + | 243 | Protein_31 | phosphoglucosamine mutase | - |
| LZ684_RS24000 (26178) | 26178..27671 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| LZ684_RS24005 (27783) | 27783..28088 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LZ684_RS24010 (28116) | 28116..29330 | - | 1215 | WP_039026029.1 | Inner membrane transport protein YdhC | ARG |
| LZ684_RS24015 (29547) | 29547..30431 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| LZ684_RS24020 (30462) | 30462..31955 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| LZ684_RS24025 (32166) | 32166..32390 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| LZ684_RS24030 (32387) | 32387..33097 | - | 711 | WP_194433555.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LZ684_RS24035 (33517) | 33517..34422 | + | 906 | WP_052259183.1 | rRNA adenine N-6-methyltransferase | ARG |
| LZ684_RS24040 (34573) | 34573..34752 | + | 180 | Protein_40 | helix-turn-helix domain-containing protein | - |
| LZ684_RS24045 (34817) | 34817..35521 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LZ684_RS24050 (35816) | 35816..37030 | + | 1215 | WP_001532073.1 | type II site-specific deoxyribonuclease | - |
| LZ684_RS24055 (37064) | 37064..38497 | - | 1434 | WP_001288435.1 | DNA cytosine methyltransferase | - |
| LZ684_RS24060 (38591) | 38591..38863 | + | 273 | Protein_44 | IS1 family transposase | - |
| LZ684_RS24065 (39120) | 39120..39817 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| LZ684_RS24070 (39938) | 39938..40776 | - | 839 | Protein_46 | Streptomycin 3''-adenylyltransferase | ARG |
| LZ684_RS24075 (40925) | 40925..41938 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LZ684_RS24080 (42141) | 42141..42377 | + | 237 | Protein_48 | DUF3330 domain-containing protein | - |
| LZ684_RS24085 (42430) | 42430..43134 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LZ684_RS24090 (43195) | 43195..43464 | + | 270 | Protein_50 | 2-keto-3-deoxygluconate permease | - |
| LZ684_RS24095 (43510) | 43510..44262 | - | 753 | WP_000562172.1 | IclR family transcriptional regulator | - |
| LZ684_RS24100 (44867) | 44867..45151 | + | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LZ684_RS24105 (45151) | 45151..45426 | + | 276 | WP_000421272.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZ684_RS24110 (45532) | 45532..45735 | + | 204 | Protein_54 | hypothetical protein | - |
| LZ684_RS24115 (45860) | 45860..45988 | - | 129 | Protein_55 | IS481 family transposase | - |
| LZ684_RS24120 (46277) | 46277..47191 | - | 915 | WP_223429136.1 | hypothetical protein | - |
| LZ684_RS24130 (49059) | 49059..49327 | + | 269 | Protein_58 | type II toxin-antitoxin system ParD family antitoxin | - |
| LZ684_RS24135 (49314) | 49314..49603 | + | 290 | Protein_59 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LZ684_RS24140 (49670) | 49670..49852 | + | 183 | WP_042344623.1 | hypothetical protein | - |
| LZ684_RS24145 (49973) | 49973..50713 | + | 741 | WP_001066953.1 | tyrosine-type recombinase/integrase | - |
| LZ684_RS24150 (50998) | 50998..51976 | - | 979 | Protein_62 | RepB family plasmid replication initiator protein | - |
| LZ684_RS24155 (52722) | 52722..53045 | + | 324 | Protein_63 | IS21 family transposase IS21 | Transposase |
| LZ684_RS24160 (53047) | 53047..53151 | + | 105 | Protein_64 | AAA family ATPase | - |
| LZ684_RS24165 (53212) | 53212..53725 | + | 514 | Protein_65 | DUF4113 domain-containing protein | - |
| LZ684_RS24175 (54958) | 54958..55872 | + | 915 | WP_072644633.1 | hypothetical protein | VF |
| LZ684_RS24180 (55872) | 55872..56699 | + | 828 | WP_000983710.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LZ684_RS24185 (56696) | 56696..57553 | + | 858 | WP_001101723.1 | hypothetical protein | ARG |
| LZ684_RS24190 (57550) | 57550..58407 | + | 858 | WP_000968139.1 | hypothetical protein | ARG |
| LZ684_RS24195 (58641) | 58641..58898 | - | 258 | Protein_71 | transposase | - |
| LZ684_RS24200 (58896) | 58896..59309 | + | 414 | Protein_72 | phosphopyruvate hydratase | - |
| LZ684_RS24205 (59650) | 59650..60030 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| LZ684_RS24210 (60410) | 60410..61603 | - | 1194 | WP_000095526.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|