MGE detailed information
MGE type: Genomic_island MGE length: 35154 bp
Accession: NZ_CP090456 Location: 4114691..4149844 Organism: Escherichia coli strain B379 Replicon: chromosome
Accession: NZ_CP090456 Location: 4114691..4149844 Organism: Escherichia coli strain B379 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ684_RS19770 (4112289) | 4112289..4113014 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| LZ684_RS19775 (4113051) | 4113051..4113590 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| LZ684_RS19780 (4113655) | 4113655..4114209 | - | 555 | WP_000695589.1 | type 1 fimbrial major subunit FimA | - |
| LZ684_RS19785 (4114691) | 4114691..4115287 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| LZ684_RS19790 (4115764) | 4115764..4116366 | - | 603 | WP_000790583.1 | type 1 fimbria switch DNA invertase FimB | - |
| LZ684_RS19795 (4117820) | 4117820..4118536 | + | 717 | WP_001360088.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| LZ684_RS19800 (4118556) | 4118556..4119662 | + | 1107 | WP_001315214.1 | N-acetylneuraminate epimerase | - |
| LZ684_RS19805 (4119727) | 4119727..4120707 | + | 981 | WP_001295601.1 | sialate O-acetylesterase | - |
| LZ684_RS19810 (4120715) | 4120715..4121365 | - | 651 | WP_001037966.1 | HNH endonuclease | - |
| LZ684_RS19815 (4121502) | 4121502..4121645 | + | 144 | Protein_3878 | HNH endonuclease | - |
| LZ684_RS19820 (4122481) | 4122481..4123125 | + | 645 | WP_050488383.1 | hypothetical protein | - |
| LZ684_RS19825 (4123261) | 4123261..4123602 | - | 342 | WP_234679202.1 | TA system toxin CbtA family protein | Toxin Detail |
| LZ684_RS19830 (4123623) | 4123623..4123940 | - | 318 | WP_234679204.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| LZ684_RS19835 (4123961) | 4123961..4124182 | - | 222 | WP_234679206.1 | DUF987 domain-containing protein | - |
| LZ684_RS19840 (4124191) | 4124191..4124667 | - | 477 | WP_222563671.1 | RadC family protein | - |
| LZ684_RS19845 (4124683) | 4124683..4125141 | - | 459 | WP_222563670.1 | antirestriction protein | - |
| LZ684_RS19850 (4125243) | 4125243..4125482 | - | 240 | WP_234679208.1 | DUF905 domain-containing protein | - |
| LZ684_RS19855 (4125559) | 4125559..4126026 | - | 468 | WP_136392182.1 | protein YkfB | - |
| LZ684_RS19860 (4126050) | 4126050..4126448 | - | 399 | WP_234679210.1 | hypothetical protein | - |
| LZ684_RS19865 (4126629) | 4126629..4128170 | + | 1542 | WP_001298859.1 | IS21-like element ISEc12 family transposase | - |
| LZ684_RS19870 (4128185) | 4128185..4128931 | + | 747 | WP_001016257.1 | IS21-like element ISEc12 family helper ATPase IstB | - |
| LZ684_RS19875 (4129079) | 4129079..4129315 | - | 237 | WP_032230807.1 | protein YpjK | - |
| LZ684_RS19880 (4129356) | 4129356..4130057 | - | 702 | WP_234679211.1 | WYL domain-containing protein | - |
| LZ684_RS19885 (4130275) | 4130275..4130964 | - | 690 | Protein_3892 | DUF945 domain-containing protein | - |
| LZ684_RS19890 (4131546) | 4131546..4133255 | + | 1710 | WP_001618784.1 | group II intron reverse transcriptase/maturase | - |
| LZ684_RS19895 (4133328) | 4133328..4133459 | - | 132 | Protein_3894 | DUF945 domain-containing protein | - |
| LZ684_RS19900 (4133551) | 4133551..4134414 | - | 864 | WP_136127283.1 | GTPase family protein | - |
| LZ684_RS19905 (4134546) | 4134546..4135307 | - | 762 | WP_134900950.1 | hypothetical protein | - |
| LZ684_RS19910 (4135595) | 4135595..4136173 | + | 579 | WP_032170431.1 | inovirus-type Gp2 protein | - |
| LZ684_RS19915 (4136295) | 4136295..4136501 | + | 207 | WP_032170432.1 | AlpA family transcriptional regulator | - |
| LZ684_RS19920 (4136709) | 4136709..4137113 | + | 405 | Protein_3899 | arsenical pump-driving ATPase | - |
| LZ684_RS19925 (4137144) | 4137144..4137569 | - | 426 | WP_136127281.1 | glutaredoxin-dependent arsenate reductase | - |
| LZ684_RS19930 (4137582) | 4137582..4138871 | - | 1290 | WP_136127280.1 | arsenite efflux transporter membrane subunit ArsB | - |
| LZ684_RS19935 (4138919) | 4138919..4140670 | - | 1752 | WP_136127279.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| LZ684_RS19940 (4140688) | 4140688..4141050 | - | 363 | WP_032170437.1 | arsenite efflux transporter metallochaperone ArsD | - |
| LZ684_RS19945 (4141098) | 4141098..4141451 | - | 354 | WP_032170438.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| LZ684_RS19950 (4141671) | 4141671..4143446 | - | 1776 | WP_032170439.1 | ATP-binding protein | - |
| LZ684_RS19955 (4143443) | 4143443..4144591 | - | 1149 | WP_032238507.1 | SIR2 family protein | - |
| LZ684_RS19960 (4144644) | 4144644..4145851 | - | 1208 | Protein_3907 | IS3 family transposase | - |
| LZ684_RS19965 (4146131) | 4146131..4146348 | - | 218 | Protein_3908 | integrase | - |
| LZ684_RS19970 (4146544) | 4146544..4147491 | + | 948 | WP_032181584.1 | hypothetical protein | - |
| LZ684_RS19975 (4147472) | 4147472..4148401 | - | 930 | WP_032170444.1 | DNA (cytosine-5-)-methyltransferase | - |
| LZ684_RS19980 (4148594) | 4148594..4149844 | - | 1251 | WP_032294613.1 | integrase arm-type DNA-binding domain-containing protein | - |
| LZ684_RS19990 (4150324) | 4150324..4151343 | + | 1020 | WP_001315986.1 | NADPH-dependent aldehyde reductase Ahr | - |
| LZ684_RS19995 (4151473) | 4151473..4152975 | + | 1503 | WP_001315985.1 | DUF853 domain-containing protein | - |
| LZ684_RS20000 (4153094) | 4153094..4154176 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|