MGE detailed information
MGE type: IScluster/Tn MGE length: 33158 bp
Accession: NZ_CP090452 Location: 1250..34407 Organism: Escherichia coli strain PT62 Replicon: plasmid pPT62-37kb
Accession: NZ_CP090452 Location: 1250..34407 Organism: Escherichia coli strain PT62 Replicon: plasmid pPT62-37kb
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZ175_RS23840 (LZ175_23830) | 1..1011 | + | 1011 | WP_000200070.1 | RepB family plasmid replication initiator protein | - |
| LZ175_RS23845 (LZ175_23835) | 1205..2173 | + | 969 | WP_077816224.1 | IS5-like element IS903B family transposase | - |
| LZ175_RS23850 (LZ175_23840) | 2340..2630 | - | 291 | WP_001471781.1 | hypothetical protein | - |
| LZ175_RS23855 (LZ175_23845) | 3289..3624 | + | 336 | WP_001039462.1 | plasmid stabilization protein StbA | - |
| LZ175_RS23860 (LZ175_23850) | 3633..3824 | + | 192 | WP_001515192.1 | hypothetical protein | - |
| LZ175_RS23865 (LZ175_23855) | 3835..4418 | - | 584 | Protein_5 | IS1 family transposase | - |
| LZ175_RS23870 (LZ175_23860) | 4952..5707 | + | 756 | WP_000807690.1 | replication initiation protein RepE | - |
| LZ175_RS23875 (LZ175_23865) | 5976..6321 | + | 346 | Protein_7 | IS1 family transposase | - |
| LZ175_RS23880 (LZ175_23870) | 6832..6972 | + | 141 | WP_160784086.1 | hypothetical protein | - |
| LZ175_RS23885 (LZ175_23875) | 7045..7314 | + | 270 | WP_000079938.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| LZ175_RS23890 (LZ175_23880) | 7314..7592 | + | 279 | WP_244578848.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| LZ175_RS23895 (LZ175_23885) | 7628..9379 | - | 1752 | Protein_11 | Tn3-like element TnAs1 family transposase | - |
| LZ175_RS23900 (LZ175_23890) | 9383..9775 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| LZ175_RS23905 (LZ175_23895) | 9913..10797 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| LZ175_RS23910 (LZ175_23900) | 10829..12028 | - | 1200 | WP_001493765.1 | tetracycline efflux MFS transporter Tet(A) | - |
| LZ175_RS23915 (LZ175_23905) | 12134..12784 | + | 651 | WP_050858789.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| LZ175_RS23920 (LZ175_23910) | 12816..13058 | - | 243 | WP_000844627.1 | transposase | - |
| LZ175_RS23925 (LZ175_23915) | 13116..16082 | - | 2967 | WP_001138014.1 | Tn3-like element TnAs1 family transposase | - |
| LZ175_RS23930 (LZ175_23920) | 16086..16646 | - | 561 | WP_001161490.1 | recombinase family protein | - |
| LZ175_RS23935 (LZ175_23925) | 16822..17172 | - | 351 | WP_071830595.1 | DUF3330 domain-containing protein | - |
| LZ175_RS23940 (LZ175_23930) | 17375..18388 | - | 1014 | WP_000845039.1 | class 1 integron integrase IntI1 | - |
| LZ175_RS23945 (LZ175_23935) | 18533..19030 | + | 498 | WP_001083725.1 | trimethoprim-resistant dihydrofolate reductase DfrA12 | - |
| LZ175_RS23950 (LZ175_23940) | 19142..19432 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| LZ175_RS23955 (LZ175_23945) | 19438..20276 | + | 839 | Protein_23 | AadA family aminoglycoside 3''-O-nucleotidyltransferase | - |
| LZ175_RS23960 (LZ175_23950) | 20491..21750 | + | 1260 | WP_000095725.1 | chloramphenicol efflux MFS transporter CmlA1 | - |
| LZ175_RS23965 (LZ175_23955) | 21843..22681 | + | 839 | Protein_25 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| LZ175_RS23970 (LZ175_23960) | 22804..23136 | + | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| LZ175_RS23975 (LZ175_23965) | 23383..24015 | - | 633 | WP_020802982.1 | IS256 family transposase | - |
| LZ175_RS23980 (LZ175_23970) | 24038..24313 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| LZ175_RS23985 (LZ175_23975) | 24316..25107 | - | 792 | WP_000034420.1 | sulfonamide-resistant dihydropteroate synthase Sul3 | - |
| LZ175_RS23990 (LZ175_23980) | 25576..25821 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| LZ175_RS23995 (LZ175_23985) | 25859..26194 | - | 336 | Protein_31 | short-chain dehydrogenase | - |
| LZ175_RS24000 (LZ175_23990) | 26248..26952 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| LZ175_RS24005 (LZ175_23995) | 28542..30079 | - | 1538 | Protein_33 | IS66-like element ISEc22 family transposase | - |
| LZ175_RS24010 (LZ175_24000) | 30128..30475 | - | 348 | WP_000612626.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| LZ175_RS24015 (LZ175_24005) | 30505..31203 | - | 699 | Protein_35 | IS1 family transposase | - |
| LZ175_RS24020 (LZ175_24010) | 31410..32735 | - | 1326 | WP_021512928.1 | reactive chlorine resistance oxidoreductase RclA | - |
| LZ175_RS24025 (LZ175_24015) | 32845..33543 | + | 699 | Protein_37 | IS1 family transposase | - |
| LZ175_RS24030 (LZ175_24020) | 33562..34407 | + | 846 | Protein_38 | IS3-like element IS911 family transposase | - |
| LZ175_RS24035 (LZ175_24025) | 34902..35873 | - | 972 | WP_000817038.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LZ175_RS24040 (LZ175_24030) | 35873..37039 | - | 1167 | WP_000523812.1 | plasmid-partitioning protein SopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|