MGE detailed information
MGE type: Conjugative plasmid MGE length: 50465 bp
Accession: NZ_CP090406 Location: 1..50465 Organism: Shigella sp. PIB Replicon: plasmid pPIB-4
Accession: NZ_CP090406 Location: 1..50465 Organism: Shigella sp. PIB Replicon: plasmid pPIB-4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXH19_RS23825 (LXH19_23820) | 377..679 | + | 303 | WP_001096511.1 | hypothetical protein | - |
| LXH19_RS23830 (LXH19_23825) | 1061..1251 | - | 191 | Protein_2 | hypothetical protein | - |
| LXH19_RS23835 (LXH19_23830) | 1954..2811 | - | 858 | WP_001462098.1 | incFII family plasmid replication initiator RepA | - |
| LXH19_RS23840 (LXH19_23835) | 2804..2878 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| LXH19_RS23845 (LXH19_23840) | 3123..3371 | - | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| LXH19_RS23850 (LXH19_23845) | 3611..4201 | - | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| LXH19_RS23855 (LXH19_23850) | 4239..4448 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| LXH19_RS23860 (LXH19_23855) | 4494..4955 | - | 462 | WP_000978819.1 | thermonuclease family protein | - |
| LXH19_RS23865 (LXH19_23860) | 5199..5390 | - | 192 | WP_071528006.1 | hypothetical protein | - |
| LXH19_RS23870 (LXH19_23865) | 6055..6732 | - | 678 | WP_032296380.1 | PIN domain-containing protein | - |
| LXH19_RS23875 (LXH19_23870) | 7019..7231 | - | 213 | WP_001301409.1 | ANR family transcriptional regulator | - |
| LXH19_RS23880 (LXH19_23875) | 7350..7910 | - | 561 | WP_000139349.1 | fertility inhibition protein FinO | - |
| LXH19_RS23885 (LXH19_23880) | 7965..8711 | - | 747 | WP_032188604.1 | conjugal transfer pilus acetylase TraX | - |
| LXH19_RS23890 (LXH19_23885) | 8731..14001 | - | 5271 | WP_242817605.1 | Multifunctional conjugation protein TraI | Relaxase |
| LXH19_RS23895 (LXH19_23890) | 14001..16199 | - | 2199 | WP_000009360.1 | type IV conjugative transfer system coupling protein TraD | - |
| LXH19_RS23900 (LXH19_23895) | 16452..17183 | - | 732 | WP_001462105.1 | conjugal transfer complement resistance protein TraT | - |
| LXH19_RS23905 (LXH19_23900) | 17215..17718 | - | 504 | WP_000605509.1 | hypothetical protein | - |
| LXH19_RS23910 (LXH19_23905) | 17733..20555 | - | 2823 | WP_001462106.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| LXH19_RS23915 (LXH19_23910) | 20552..21925 | - | 1374 | WP_032241676.1 | conjugal transfer pilus assembly protein TraH | - |
| LXH19_RS23920 (LXH19_23915) | 21912..22304 | - | 393 | WP_000660703.1 | F-type conjugal transfer protein TrbF | - |
| LXH19_RS23925 (LXH19_23920) | 22285..22626 | - | 342 | WP_001448115.1 | P-type conjugative transfer protein TrbJ | - |
| LXH19_RS23930 (LXH19_23925) | 22556..23101 | - | 546 | WP_000059829.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| LXH19_RS23935 (LXH19_23930) | 23088..23372 | - | 285 | WP_000623730.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| LXH19_RS23940 (LXH19_23935) | 23499..23837 | - | 339 | WP_001287901.1 | conjugal transfer protein TrbA | - |
| LXH19_RS23945 (LXH19_23940) | 23853..24596 | - | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| LXH19_RS23950 (LXH19_23945) | 24589..24846 | - | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| LXH19_RS23955 (LXH19_23950) | 24873..26723 | - | 1851 | WP_032241672.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| LXH19_RS23960 (LXH19_23955) | 26720..27358 | - | 639 | WP_217290945.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| LXH19_RS23965 (LXH19_23960) | 27367..27672 | - | 306 | WP_000224411.1 | hypothetical protein | - |
| LXH19_RS23970 (LXH19_23965) | 27702..28694 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| LXH19_RS23975 (LXH19_23970) | 28691..29323 | - | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| LXH19_RS23980 (LXH19_23975) | 29320..29706 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| LXH19_RS23985 (LXH19_23980) | 29703..32333 | - | 2631 | WP_000069752.1 | type IV secretion system protein TraC | - |
| LXH19_RS23990 (LXH19_23985) | 32459..32806 | - | 348 | WP_000836682.1 | hypothetical protein | - |
| LXH19_RS23995 (LXH19_23990) | 32834..33052 | - | 219 | WP_000556745.1 | hypothetical protein | - |
| LXH19_RS24000 (LXH19_23995) | 33132..33608 | - | 477 | WP_124827459.1 | hypothetical protein | - |
| LXH19_RS24005 (LXH19_24000) | 33601..33822 | - | 222 | WP_003676426.1 | conjugal transfer protein TraR | - |
| LXH19_RS24010 (LXH19_24005) | 33957..34472 | - | 516 | WP_001462163.1 | type IV conjugative transfer system lipoprotein TraV | - |
| LXH19_RS24015 (LXH19_24010) | 34469..34720 | - | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| LXH19_RS24020 (LXH19_24015) | 34713..35033 | - | 321 | WP_001462162.1 | conjugal transfer protein TrbD | - |
| LXH19_RS24025 (LXH19_24020) | 35030..35602 | - | 573 | WP_023063811.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| LXH19_RS24030 (LXH19_24025) | 35592..37019 | - | 1428 | WP_001462160.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| LXH19_RS24035 (LXH19_24030) | 37019..37747 | - | 729 | WP_001230809.1 | type-F conjugative transfer system secretin TraK | - |
| LXH19_RS24040 (LXH19_24035) | 37734..38300 | - | 567 | WP_000399805.1 | type IV conjugative transfer system protein TraE | - |
| LXH19_RS24045 (LXH19_24040) | 38322..38633 | - | 312 | WP_000012097.1 | type IV conjugative transfer system protein TraL | - |
| LXH19_RS24050 (LXH19_24045) | 38648..39013 | - | 366 | WP_001098996.1 | type IV conjugative transfer system pilin TraA | - |
| LXH19_RS24055 (LXH19_24050) | 39046..39273 | - | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| LXH19_RS24060 (LXH19_24055) | 39398..40051 | - | 654 | WP_001342640.1 | conjugal transfer protein TraJ | - |
| LXH19_RS24065 (LXH19_24060) | 40242..40625 | - | 384 | WP_001342639.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| LXH19_RS24070 (LXH19_24065) | 40960..41550 | + | 591 | WP_124827468.1 | hypothetical protein | VF |
| LXH19_RS24075 (LXH19_24070) | 41847..42668 | - | 822 | WP_001234372.1 | DUF932 domain-containing protein | - |
| LXH19_RS24080 (LXH19_24075) | 42779..42928 | - | 150 | WP_233337085.1 | hypothetical protein | - |
| LXH19_RS24085 (LXH19_24080) | 43200..43502 | - | 303 | WP_000379301.1 | hypothetical protein | - |
| LXH19_RS24090 (LXH19_24085) | 43578..43811 | - | 234 | WP_000093745.1 | hypothetical protein | - |
| LXH19_RS24095 (LXH19_24090) | 44239..44526 | - | 288 | WP_000606467.1 | hypothetical protein | - |
| LXH19_RS24100 (LXH19_24095) | 44831..45124 | - | 294 | WP_000673431.1 | hypothetical protein | - |
| LXH19_RS24105 (LXH19_24100) | 45256..45474 | - | 219 | WP_154101533.1 | hypothetical protein | - |
| LXH19_RS24110 (LXH19_24105) | 45695..45937 | - | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| LXH19_RS24115 (LXH19_24110) | 45934..46188 | - | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| LXH19_RS24120 (LXH19_24115) | 46185..46727 | - | 543 | WP_001083904.1 | hypothetical protein | - |
| LXH19_RS24125 (LXH19_24120) | 46831..47346 | - | 516 | WP_001025393.1 | J domain-containing protein | - |
| LXH19_RS24130 (LXH19_24125) | 48181..48531 | - | 351 | WP_000127482.1 | addiction module antitoxin | - |
| LXH19_RS24135 (LXH19_24130) | 48518..48862 | - | 345 | WP_001146936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| LXH19_RS24140 (LXH19_24135) | 49216..49539 | - | 324 | WP_000432873.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|