MGE detailed information
MGE type: Genomic_island MGE length: 16246 bp
Accession: NZ_CP090402 Location: 4256670..4272915 Organism: Shigella sp. PIB Replicon: chromosome
Accession: NZ_CP090402 Location: 4256670..4272915 Organism: Shigella sp. PIB Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXH19_RS20160 (4253340) | 4253340..4254797 | + | 1458 | WP_024045128.1 | dipeptide/tripeptide permease DtpC | - |
| LXH19_RS20165 (4255034) | 4255034..4256551 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| LXH19_RS20170 (4256670) | 4256670..4256843 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| LXH19_RS20175 (4256871) | 4256871..4257167 | - | 297 | WP_001560287.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| LXH19_RS20180 (4257396) | 4257396..4257668 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| LXH19_RS20185 (4257881) | 4257881..4261810 | - | 3930 | WP_024046188.1 | Serine protease EspC | VF |
| LXH19_RS20190 (4262966) | 4262966..4263796 | - | 831 | WP_001088102.1 | AraC family transcriptional regulator | - |
| LXH19_RS20195 (4264703) | 4264703..4268545 | - | 3843 | WP_024046191.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| LXH19_RS20200 (4269024) | 4269024..4269593 | + | 570 | WP_000749169.1 | oxidoreductase | - |
| LXH19_RS20205 (4269644) | 4269644..4270345 | + | 702 | WP_000875622.1 | putative fimbrial chaperone protein ElfD | VF |
| LXH19_RS20210 (4270378) | 4270378..4272915 | + | 2538 | WP_001376257.1 | Outer membrane usher protein FimD | VF |
| LXH19_RS20215 (4273025) | 4273025..4273297 | - | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| LXH19_RS20220 (4273309) | 4273309..4273539 | - | 231 | WP_000373291.1 | 4Fe-4S mono-cluster protein YjdI | - |
| LXH19_RS20225 (4273720) | 4273720..4275351 | + | 1632 | WP_206312507.1 | sensor histidine kinase | - |
| LXH19_RS20230 (4275348) | 4275348..4276067 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|