MGE detailed information
MGE type: Prophage MGE length: 23421 bp
Accession: NZ_CP090402 Location: 2034487..2057907 Organism: Shigella sp. PIB Replicon: chromosome
Accession: NZ_CP090402 Location: 2034487..2057907 Organism: Shigella sp. PIB Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXH19_RS09695 () | 2030616..2031257 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| LXH19_RS09700 () | 2031312..2032490 | - | 1179 | WP_000173460.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| LXH19_RS09705 () | 2032624..2032914 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| LXH19_RS09710 () | 2032981..2033337 | + | 357 | WP_001295500.1 | protein YebF | - |
| LXH19_RS09715 () | 2033664..2034323 | + | 660 | WP_206312524.1 | tellurite resistance TerB family protein | - |
| LXH19_RS09720 () | 2034487..2035656 | - | 1170 | WP_024043616.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LXH19_RS09725 () | 2035713..2036138 | + | 426 | WP_000064874.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| LXH19_RS09730 () | 2036295..2038355 | + | 2061 | WP_000936960.1 | oligopeptidase B | - |
| LXH19_RS09735 () | 2038352..2039014 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| LXH19_RS09740 () | 2039038..2039694 | - | 657 | WP_000011651.1 | carbon-nitrogen hydrolase family protein YobB | - |
| LXH19_RS09745 () | 2039796..2040026 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| LXH19_RS09750 () | 2040165..2040539 | + | 375 | WP_001578488.1 | CopC domain-containing protein YobA | - |
| LXH19_RS09755 () | 2040543..2041415 | + | 873 | WP_000879330.1 | copper homeostasis membrane protein CopD | - |
| LXH19_RS09760 () | 2041428..2041769 | + | 342 | WP_000976485.1 | YebY family protein | - |
| - | 2041799..2042067 | - | 269 | - | - | Antitoxin Detail |
| - | 2041926..2042029 | + | 104 | - | - | Toxin Detail |
| LXH19_RS09765 () | 2042164..2042820 | + | 657 | WP_001559255.1 | protein-serine/threonine phosphatase | - |
| LXH19_RS09770 () | 2042821..2043012 | - | 192 | WP_001296140.1 | YebW family protein | - |
| LXH19_RS09775 () | 2043117..2043353 | - | 237 | WP_001295499.1 | YebV family protein | - |
| LXH19_RS09780 () | 2043471..2044910 | - | 1440 | WP_024186572.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| LXH19_RS09785 () | 2044990..2047623 | - | 2634 | WP_001469185.1 | hypothetical protein | VF |
| LXH19_RS09790 () | 2047592..2048875 | - | 1284 | WP_001469184.1 | membrane integrity lipid transport subunit YebS | - |
| LXH19_RS09795 () | 2049005..2049502 | + | 498 | WP_001043875.1 | L-methionine (R)-S-oxide reductase | - |
| LXH19_RS09800 () | 2049599..2050297 | + | 699 | WP_000431370.1 | RNA chaperone ProQ | - |
| LXH19_RS09805 () | 2050317..2052365 | + | 2049 | WP_001055785.1 | carboxy terminal-processing peptidase | - |
| LXH19_RS09810 () | 2052557..2053438 | + | 882 | WP_000984517.1 | protease HtpX | - |
| LXH19_RS09815 () | 2053484..2054857 | - | 1374 | WP_024043614.1 | MFS transporter | - |
| LXH19_RS09820 () | 2055034..2055825 | + | 792 | WP_001262179.1 | DNA-binding transcriptional regulator KdgR | - |
| LXH19_RS09825 () | 2055969..2056208 | - | 240 | WP_001211011.1 | YobH family protein | - |
| LXH19_RS09830 () | 2056367..2056510 | + | 144 | WP_000714550.1 | PhoP/PhoQ regulator MgrB | - |
| LXH19_RS09835 () | 2056585..2056872 | + | 288 | WP_001006855.1 | YebO family protein | - |
| LXH19_RS09840 () | 2057542..2057685 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| LXH19_RS09845 () | 2057698..2057907 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| LXH19_RS09850 () | 2058073..2058882 | + | 810 | WP_000010122.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| LXH19_RS09855 () | 2058879..2059445 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| LXH19_RS09860 () | 2059874..2060332 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| LXH19_RS09865 () | 2060387..2061238 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| LXH19_RS09870 () | 2061251..2062051 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|