MGE detailed information

MGE type: Conjugative plasmid        MGE length: 171602 bp
Accession: NZ_CP090391        Location: 1..171602         Organism: Klebsiella pneumoniae strain YZH22127       Replicon: plasmid pYUYZH22127-2


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LZC40_RS27245 1..876 + 876 WP_132468282.1 incFII family plasmid replication initiator RepA -
LZC40_RS27250 1948..2109 + 162 Protein_1 SOS response-associated peptidase -
LZC40_RS27255 2278..2975 + 698 WP_223335778.1 IS1 family transposase IS1R Transposase
LZC40_RS27260 2985..4067 + 1083 WP_032140505.1 lytic murein transglycosylase B -
LZC40_RS27265 4175..5032 - 858 Protein_4 APC family permease -
LZC40_RS27270 5085..5789 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LZC40_RS27275 5895..6230 + 336 WP_001172026.1 helix-turn-helix transcriptional regulator -
LZC40_RS27280 6245..6580 + 336 WP_000741275.1 hypothetical protein -
LZC40_RS27285 6604..6930 + 327 WP_000091614.1 hypothetical protein -
LZC40_RS27290 6927..7307 + 381 Protein_9 hypothetical protein -
LZC40_RS27295 7425..8672 + 1248 WP_058655925.1 HD-GYP domain-containing protein -
LZC40_RS27300 8822..9853 - 1032 WP_001809438.1 IS630 family transposase ISAhy2 Transposase
LZC40_RS27305 9999..12128 - 2130 Protein_12 Tn3 family transposase TnpA_TnAs1 Transposase
LZC40_RS27310 12132..12692 - 561 WP_001161490.1 Tn3 family transposase TnpR_TnAs1 Transposase
LZC40_RS27315 13084..13701 + 618 Protein_14 replication protein -
LZC40_RS27320 14235..14513 + 279 WP_013213990.1 hypothetical protein -
LZC40_RS27325 14624..15049 + 426 WP_013213989.1 antirestriction protein -
LZC40_RS27330 15177..15332 + 156 WP_013213988.1 hypothetical protein -
LZC40_RS27335 15378..15674 + 297 WP_013213987.1 transcriptional regulator -
LZC40_RS27340 15778..16659 + 882 Protein_19 IS1182 family transposase ISKpn6 Transposase
LZC40_RS27345 16909..17790 - 882 WP_004199234.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
LZC40_RS27350 18066..19046 - 981 WP_013213985.1 IS481 family transposase ISKpn27 Transposase
LZC40_RS27355 19169..19726 - 558 WP_001217881.1 Tn3 family transposase TnpR_Tn3 Transposase
LZC40_RS27360 19889..22898 + 3010 Protein_23 Tn3 family transposase ISEc63 Transposase
LZC40_RS27365 22932..23420 - 489 Protein_24 substrate-binding domain-containing protein -
LZC40_RS27370 23983..24183 - 201 WP_022631502.1 hypothetical protein -
LZC40_RS27375 24484..25452 - 969 WP_013815099.1 IS5 family transposase IS903B Transposase
LZC40_RS27380 25825..28017 + 2193 WP_004099052.1 1,4-alpha-glucan branching enzyme -
LZC40_RS27385 28147..29430 + 1284 WP_004099051.1 glucose-1-phosphate adenylyltransferase -
LZC40_RS27390 29519..30952 + 1434 WP_009653212.1 glycogen synthase GlgA -
LZC40_RS27395 30971..33418 + 2448 WP_023157975.1 glycogen phosphorylase -
LZC40_RS27400 33532..35178 + 1647 WP_141407620.1 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) -
LZC40_RS27405 35262..36293 + 1032 WP_004176137.1 IS630 family transposase ISEc33 Transposase
LZC40_RS27410 36455..37021 + 567 WP_004197678.1 LuxR C-terminal-related transcriptional regulator -
LZC40_RS27415 37356..37634 + 279 WP_004197671.1 hypothetical protein -
LZC40_RS27420 37662..37853 - 192 Protein_35 hypothetical protein -
LZC40_RS27425 37874..39271 - 1398 WP_009653207.1 ISNCY family transposase ISKpn21 Transposase
LZC40_RS27430 39460..39855 - 396 WP_004143398.1 ISNCY family transposase ISKpn21 Transposase
LZC40_RS27435 39904..41250 - 1347 WP_077253535.1 ISNCY family transposase ISLad2 Transposase
LZC40_RS27440 41476..42108 + 633 WP_001567369.1 hypothetical protein -
LZC40_RS27445 42137..43540 - 1404 WP_001567368.1 ISNCY family transposase ISKpn21 Transposase
LZC40_RS27450 43741..44223 - 483 WP_003026803.1 GNAT family N-acetyltransferase Toxin Detail
LZC40_RS27455 44211..44477 - 267 WP_003026799.1 DUF1778 domain-containing protein Antitoxin Detail
LZC40_RS27460 44653..44907 - 255 WP_004152108.1 hypothetical protein -
LZC40_RS27465 44983..45240 - 258 WP_004152107.1 hypothetical protein -
LZC40_RS27470 45289..45492 - 204 WP_004152106.1 HHA domain-containing protein -
LZC40_RS27475 45526..45894 - 369 WP_230444826.1 hypothetical protein -
LZC40_RS27480 45938..46432 - 495 WP_004152104.1 DNA-binding protein -
LZC40_RS27485 46463..47038 - 576 WP_004152103.1 hypothetical protein -
LZC40_RS27490 47026..47295 - 270 WP_004152102.1 hypothetical protein -
LZC40_RS27495 47732..48421 + 690 WP_020315560.1 RES family NAD+ phosphorylase -
LZC40_RS27500 48453..49142 - 690 WP_004193995.1 hypothetical protein -
LZC40_RS27505 49655..50014 + 360 WP_064392772.1 hypothetical protein -
LZC40_RS27510 50048..50725 + 678 WP_064392774.1 hypothetical protein -
LZC40_RS27515 50722..51510 + 789 WP_064392776.1 site-specific integrase -
LZC40_RS27520 51555..52250 - 696 WP_040118530.1 replication initiation protein -
LZC40_RS27525 52861..53046 + 186 Protein_56 hypothetical protein -
LZC40_RS27530 53043..53576 - 534 Protein_57 Recombination-promoting nuclease RpnA VF
LZC40_RS27535 53749..54683 + 935 Protein_58 IS3 family transposase ISEc25 Transposase
LZC40_RS27540 54966..56048 + 1083 WP_064392781.1 IS110 family transposase ISEc21 Transposase
LZC40_RS27545 56065..56361 + 297 Protein_60 IS3 family transposase ISEhe3 Transposase
LZC40_RS27550 56666..57184 + 519 WP_022644913.1 hypothetical protein -
LZC40_RS27555 58263..58883 + 621 WP_032743918.1 ParA family protein -
LZC40_RS27560 58933..59163 + 231 WP_032743917.1 plasmid partition protein ParG -
LZC40_RS27565 59206..59406 - 201 WP_064392565.1 hypothetical protein -
LZC40_RS27570 59508..60653 - 1146 Protein_65 translesion error-prone DNA polymerase V subunit UmuC -
LZC40_RS27575 60715..61110 + 396 WP_228730050.1 phage integrase N-terminal SAM-like domain-containing protein -
LZC40_RS27580 61152..62120 - 969 WP_074091250.1 IS5 family transposase IS903B Transposase
LZC40_RS27585 62169..62474 - 306 Protein_68 type II site-specific deoxyribonuclease -
LZC40_RS27590 62774..63478 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LZC40_RS27595 64523..64852 + 330 WP_000493286.1 type II toxin-antitoxin system RelE/ParE family toxin -
LZC40_RS27600 64833..65114 + 282 WP_000780222.1 helix-turn-helix transcriptional regulator -
LZC40_RS27605 65392..66372 + 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
LZC40_RS27610 66689..67189 - 501 WP_001752509.1 non-heme ferritin-like protein -
LZC40_RS27615 67516..68220 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
LZC40_RS27620 68313..69334 - 1022 Protein_75 IS110 family transposase IS1618 Transposase
LZC40_RS27625 69556..69891 - 336 WP_016236507.1 hypothetical protein -
LZC40_RS27630 69888..70103 - 216 Protein_77 EamA family transporter -
LZC40_RS27635 70381..71385 - 1005 WP_000427614.1 IS110 family transposase IS5075 Transposase
LZC40_RS27640 71573..72181 + 609 WP_004393990.1 TetR/AcrR family transcriptional regulator -
LZC40_RS27645 72178..73329 + 1152 WP_022652304.1 efflux RND transporter periplasmic adaptor subunit -
LZC40_RS27650 73326..74531 + 1206 WP_000624215.1 ABC transporter permease -
LZC40_RS27655 74533..75243 + 711 WP_004393997.1 Lipoprotein-releasing system ATP-binding protein LolD VF
LZC40_RS27660 75272..75745 + 474 WP_082226212.1 cytochrome c -
LZC40_RS27665 75732..77219 + 1488 WP_011784757.1 Multidrug/solvent efflux pump outer membrane protein MepC VF
LZC40_RS27670 77350..77907 + 558 WP_016236504.1 Tn3 family transposase TnpR_TnAs2 Transposase
LZC40_RS27675 77952..78944 + 993 Protein_86 Tn3 family transposase TnpA_TnAs3 Transposase
LZC40_RS27680 79209..80213 + 1005 WP_000427619.1 IS110 family transposase IS5075 Transposase
LZC40_RS27685 80673..80993 + 321 WP_001137910.1 DUF134 domain-containing protein -
LZC40_RS27690 80968..81429 + 462 WP_000626969.1 NifB/NifX family molybdenum-iron cluster-binding protein -
LZC40_RS27695 81590..82027 + 438 WP_016241611.1 PaaI family thioesterase -
LZC40_RS27700 82142..82618 + 477 WP_000043177.1 hypothetical protein VF
LZC40_RS27705 82923..83273 - 351 WP_000928911.1 metalloregulator ArsR/SmtB family transcription factor -
LZC40_RS27710 83435..85093 + 1659 WP_082226211.1 FAD-dependent oxidoreductase -
LZC40_RS27715 85339..85803 + 465 WP_001243598.1 isoprenylcysteine carboxylmethyltransferase family protein -
LZC40_RS27720 86083..87063 - 981 WP_000019445.1 IS5 family transposase ISKpn26 Transposase
LZC40_RS27725 87132..87593 - 462 WP_020805464.1 hypothetical protein -
LZC40_RS27730 87624..88116 - 493 Protein_97 hypothetical protein -
LZC40_RS27735 88318..89943 - 1626 WP_020804893.1 50S ribosome-binding GTPase -
LZC40_RS27740 89930..91768 - 1839 WP_020804891.1 dynamin family protein -
LZC40_RS27745 91765..92223 - 459 WP_020804892.1 hypothetical protein -
LZC40_RS27750 92234..93097 - 864 WP_020804894.1 50S ribosome-binding GTPase -
LZC40_RS27755 93153..93377 - 225 WP_223878977.1 hypothetical protein -
LZC40_RS27760 93532..94226 - 695 Protein_103 IS6 family transposase -
LZC40_RS27765 94725..95048 + 324 WP_017900603.1 DUF1778 domain-containing protein -
LZC40_RS27770 95032..95580 + 549 WP_017900604.1 GNAT family N-acetyltransferase -
LZC40_RS27775 95845..95976 - 132 Protein_106 IS5/IS1182 family transposase -
LZC40_RS27780 96083..98764 - 2682 WP_032744126.1 AAA family ATPase -
LZC40_RS27785 99050..99982 - 933 WP_020805035.1 S-4TM family putative pore-forming effector -
LZC40_RS27790 99986..100981 - 996 WP_032744124.1 hypothetical protein -
LZC40_RS27795 101617..102393 + 777 WP_064343542.1 site-specific integrase -
LZC40_RS27800 102538..103527 - 990 WP_020804955.1 Recombination-promoting nuclease RpnA VF
LZC40_RS27805 104739..105359 + 621 WP_032743918.1 ParA family protein -
LZC40_RS27810 105409..105639 + 231 WP_032743917.1 plasmid partition protein ParG -
LZC40_RS27815 105733..106554 - 822 Protein_114 translesion error-prone DNA polymerase V subunit UmuC -
LZC40_RS27820 106616..107623 + 1008 WP_064181645.1 Tyrosine recombinase XerC VF
LZC40_RS27825 107607..109817 + 2211 WP_032447056.1 tyrosine-type recombinase/integrase -
LZC40_RS27830 109857..110375 - 519 WP_014839975.1 hypothetical protein -
LZC40_RS27835 110383..111243 - 861 WP_017900684.1 WYL domain-containing protein -
LZC40_RS27840 111380..112561 + 1182 WP_017900685.1 hypothetical protein -
LZC40_RS27845 112558..114786 + 2229 WP_014839974.1 Mov34/MPN/PAD-1 family protein -
LZC40_RS27850 114819..114959 - 141 Protein_121 DNA polymerase V subunit UmuC -
LZC40_RS27855 114959..115384 - 426 WP_032743916.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
LZC40_RS27860 115593..115823 + 231 WP_032743912.1 hypothetical protein -
LZC40_RS27865 115994..116187 + 194 Protein_124 hypothetical protein -
LZC40_RS27870 116259..116960 + 702 WP_032743909.1 DNA methyltransferase -
LZC40_RS27875 116960..117181 + 222 WP_032743907.1 hypothetical protein -
LZC40_RS27880 117227..117637 + 411 WP_032743904.1 DUF1380 family protein -
LZC40_RS27885 117689..118456 + 768 WP_032743901.1 hypothetical protein -
LZC40_RS27890 118895..119323 + 429 WP_048757062.1 antirestriction protein -
LZC40_RS27895 119368..119874 + 507 WP_048757065.1 antirestriction protein ArdA -
LZC40_RS27900 119917..120108 + 192 WP_000761848.1 hypothetical protein -
LZC40_RS27905 120309..120572 + 264 WP_032425679.1 DNA polymerase III subunit theta -
LZC40_RS27910 120597..120917 + 321 WP_049077843.1 hypothetical protein -
LZC40_RS27915 121180..121277 - 98 Protein_134 hypothetical protein -
LZC40_RS27920 121561..122118 + 558 WP_094638182.1 single-stranded DNA-binding protein -
LZC40_RS27925 122167..122415 + 249 WP_053390232.1 DUF905 domain-containing protein -
LZC40_RS27930 122486..124486 + 2001 WP_053390231.1 ParB/RepB/Spo0J family partition protein -
LZC40_RS27935 124527..124961 + 435 WP_087498962.1 conjugation system SOS inhibitor PsiB -
LZC40_RS27940 124958..125686 + 729 WP_080884253.1 plasmid SOS inhibition protein A -
LZC40_RS27945 125683..126006 + 324 WP_053390228.1 hypothetical protein -
LZC40_RS27950 126802..127029 + 228 WP_022644716.1 hypothetical protein -
LZC40_RS27955 127122..127352 + 231 WP_020804025.1 hypothetical protein -
LZC40_RS27960 127401..128276 + 876 WP_022644946.1 DUF4942 domain-containing protein -
LZC40_RS27965 129095..129433 + 339 WP_053390250.1 hypothetical protein -
LZC40_RS27970 129488..129835 + 348 WP_053390249.1 hypothetical protein -
LZC40_RS27975 129926..130156 + 231 WP_032744242.1 hypothetical protein -
LZC40_RS27980 130203..131036 + 834 WP_053390248.1 N-6 DNA methylase -
LZC40_RS27985 131685..132227 + 543 WP_053390246.1 antirestriction protein -
LZC40_RS27990 132250..132672 - 423 WP_077268549.1 hypothetical protein VF
LZC40_RS27995 133178..133570 + 393 WP_053390193.1 conjugal transfer relaxosome DNA-binding protein TraM -
LZC40_RS28000 133808..134509 + 702 WP_094898581.1 hypothetical protein -
LZC40_RS28005 134670..134831 + 162 WP_172686697.1 TraY domain-containing protein -
LZC40_RS28010 134896..135264 + 369 WP_064386081.1 type IV conjugative transfer system pilin TraA -
LZC40_RS28015 135278..135583 + 306 WP_064343526.1 type IV conjugative transfer system protein TraL -
LZC40_RS28020 135599..136165 + 567 WP_064359954.1 type IV conjugative transfer system protein TraE -
LZC40_RS28025 136152..136886 + 735 WP_064343528.1 type-F conjugative transfer system secretin TraK -
LZC40_RS28030 136886..138307 + 1422 WP_053390199.1 F-type conjugal transfer pilus assembly protein TraB -
LZC40_RS28035 138300..138734 + 435 WP_020322358.1 conjugal transfer protein TraP -
LZC40_RS28040 138768..139352 + 585 WP_064343530.1 type IV conjugative transfer system lipoprotein TraV -
LZC40_RS28045 139965..140153 + 189 WP_053390286.1 hypothetical protein -
LZC40_RS28050 140237..140638 + 402 WP_064343532.1 hypothetical protein -
LZC40_RS28055 140635..140934 + 300 WP_053390308.1 hypothetical protein -
LZC40_RS28060 141022..141405 + 384 WP_042946290.1 hypothetical protein -
LZC40_RS28065 141498..144137 + 2640 WP_064343533.1 type IV secretion system protein TraC -
LZC40_RS28070 144137..144529 + 393 WP_064343534.1 type-F conjugative transfer system protein TrbI -
LZC40_RS28075 144526..145152 + 627 WP_064343535.1 type-F conjugative transfer system protein TraW -
LZC40_RS28080 145196..146155 + 960 WP_229295972.1 conjugal transfer pilus assembly protein TraU -
LZC40_RS28085 146168..146815 + 648 WP_064343536.1 type-F conjugative transfer system pilin assembly protein TrbC -
LZC40_RS28090 146812..147195 + 384 WP_053390297.1 hypothetical protein -
LZC40_RS28095 147192..149147 + 1956 WP_064343537.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
LZC40_RS28100 149179..149439 + 261 WP_053390216.1 hypothetical protein -
LZC40_RS28105 149432..150043 + 612 WP_053390217.1 hypothetical protein -
LZC40_RS28110 150033..150275 + 243 WP_053390218.1 conjugal transfer protein TrbE -
LZC40_RS28115 150321..150647 + 327 WP_053390219.1 hypothetical protein -
LZC40_RS28120 150668..151420 + 753 WP_053390220.1 type-F conjugative transfer system pilin assembly protein TraF -
LZC40_RS28125 151431..151667 + 237 WP_053390221.1 type-F conjugative transfer system pilin chaperone TraQ -
LZC40_RS28130 151642..152202 + 561 WP_039698500.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
LZC40_RS28135 152189..153559 + 1371 WP_075606918.1 conjugal transfer pilus assembly protein TraH -
LZC40_RS28140 153559..156414 + 2856 WP_075606917.1 conjugal transfer mating-pair stabilization protein TraG -
LZC40_RS28145 156431..157102 + 672 WP_088883382.1 hypothetical protein -
LZC40_RS28150 157348..158040 + 693 WP_202395549.1 hypothetical protein -
LZC40_RS28155 158159..160477 + 2319 WP_075606915.1 type IV conjugative transfer system coupling protein TraD -
LZC40_RS28160 160477..165735 + 5259 WP_075606914.1 Multifunctional conjugation protein TraI Relaxase
LZC40_RS28165 165818..166543 + 726 WP_064386205.1 type-F conjugative transfer system pilin acetylase TraX -
LZC40_RS28170 166700..167290 + 591 WP_009651737.1 fertility inhibition protein FinO -
LZC40_RS28175 167440..168231 + 792 WP_075606913.1 DsbA family protein -
LZC40_RS28180 168361..168957 + 597 WP_042927543.1 PIN domain-containing protein -
LZC40_RS28185 169027..169671 + 645 WP_042927545.1 hypothetical protein -
LZC40_RS28190 169727..170287 + 561 Protein_189 DUF2726 domain-containing protein -
LZC40_RS28195 170350..170916 + 567 WP_202979376.1 Phospholipase D VF
LZC40_RS28200 171048..171305 + 258 WP_015344940.1 replication regulatory protein RepA -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance