MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 41043 bp
Accession: NZ_CP090380 Location: 1..41043 Organism: Vibrio cholerae strain BY369 Replicon: plasmid pBY369-1
Accession: NZ_CP090380 Location: 1..41043 Organism: Vibrio cholerae strain BY369 Replicon: plasmid pBY369-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ30_RS18920 (LVJ30_18915) | 768..3530 | + | 2763 | Protein_1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| LVJ30_RS18925 (LVJ30_18920) | 3878..4522 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| LVJ30_RS18930 (LVJ30_18925) | 4808..5428 | + | 621 | WP_000864791.1 | ParA family protein | - |
| LVJ30_RS18935 (LVJ30_18930) | 5480..5710 | + | 231 | WP_000051064.1 | plasmid partition protein ParG | - |
| LVJ30_RS18940 (LVJ30_18935) | 5726..6019 | + | 294 | WP_015060510.1 | hypothetical protein | - |
| LVJ30_RS18945 (LVJ30_18940) | 6021..6989 | + | 969 | WP_077783213.1 | IS5 family transposase IS903B | Transposase |
| LVJ30_RS18950 (LVJ30_18945) | 7049..7402 | - | 354 | WP_000876434.1 | DNA distortion polypeptide 3 | - |
| LVJ30_RS18955 (LVJ30_18950) | 7539..7985 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| LVJ30_RS18960 (LVJ30_18955) | 8025..8861 | - | 837 | WP_001050931.1 | RepB family plasmid replication initiator protein | - |
| LVJ30_RS18965 (LVJ30_18960) | 10117..10368 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| LVJ30_RS18970 (LVJ30_18965) | 10358..10639 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LVJ30_RS18975 (LVJ30_18970) | 10785..11108 | + | 324 | WP_001181903.1 | hypothetical protein | - |
| LVJ30_RS18980 (LVJ30_18975) | 11153..11398 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| LVJ30_RS18985 (LVJ30_18980) | 11388..11603 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| LVJ30_RS18990 (LVJ30_18985) | 11696..12025 | + | 330 | WP_000866648.1 | hypothetical protein | - |
| LVJ30_RS18995 (LVJ30_18990) | 12312..12461 | + | 150 | WP_000003880.1 | hypothetical protein | - |
| LVJ30_RS19000 (LVJ30_18995) | 12474..12746 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| LVJ30_RS19005 (LVJ30_19000) | 13072..13617 | + | 546 | WP_015060502.1 | DNA distortion polypeptide 1 | - |
| LVJ30_RS19010 (LVJ30_19005) | 13620..14786 | + | 1167 | WP_000539530.1 | hypothetical protein | Relaxase |
| LVJ30_RS19015 (LVJ30_19010) | 15132..15650 | + | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| LVJ30_RS19020 (LVJ30_19015) | 15825..15938 | + | 114 | Protein_21 | transglycosylase | - |
| LVJ30_RS19030 (LVJ30_19025) | 16934..17542 | + | 609 | WP_097475753.1 | hypothetical protein | VF |
| LVJ30_RS19035 (LVJ30_19030) | 17638..18339 | + | 702 | WP_047929050.1 | putative fimbrial chaperone YadV | VF |
| LVJ30_RS19040 (LVJ30_19035) | 18351..20837 | + | 2487 | WP_047929049.1 | Outer membrane usher protein HtrE | VF |
| LVJ30_RS19045 (LVJ30_19040) | 20828..21823 | + | 996 | WP_097430455.1 | Fimbria adhesin protein | VF |
| LVJ30_RS19050 (LVJ30_19045) | 21837..22472 | + | 636 | WP_047929047.1 | hypothetical protein | VF |
| LVJ30_RS19055 (LVJ30_19050) | 22507..22704 | - | 198 | Protein_28 | hypothetical protein | VF |
| LVJ30_RS19060 (LVJ30_19055) | 22738..23706 | + | 969 | WP_077783213.1 | IS5 family transposase IS903B | Transposase |
| LVJ30_RS19065 (LVJ30_19060) | 23988..24848 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| LVJ30_RS19070 (LVJ30_19065) | 25031..25588 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| LVJ30_RS19075 (LVJ30_19070) | 25752..28757 | + | 3006 | WP_232579884.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| LVJ30_RS19080 (LVJ30_19075) | 28853..29689 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LVJ30_RS19085 (LVJ30_19080) | 29689..30492 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LVJ30_RS19095 (LVJ30_19090) | 31793..32407 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LVJ30_RS19100 (LVJ30_19095) | 32762..33970 | + | 1209 | Protein_37 | IS4 family transposase IS10R | Transposase |
| LVJ30_RS19105 (LVJ30_19100) | 33980..34396 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| LVJ30_RS19110 (LVJ30_19105) | 34484..35077 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| LVJ30_RS19115 (LVJ30_19110) | 35190..36395 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| LVJ30_RS19120 (LVJ30_19115) | 36477..37100 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| LVJ30_RS19125 (LVJ30_19120) | 37078..37764 | - | 687 | WP_001284954.1 | winged helix-turn-helix domain-containing protein | - |
| LVJ30_RS19130 (LVJ30_19125) | 37772..38158 | - | 387 | WP_000460651.1 | hypothetical protein | - |
| LVJ30_RS19135 (LVJ30_19130) | 38151..38470 | - | 320 | Protein_44 | antibiotic biosynthesis monooxygenase | - |
| LVJ30_RS19140 (LVJ30_19135) | 38914..40119 | + | 1206 | WP_000599530.1 | sodium/glutamate symporter | - |
| LVJ30_RS19145 (LVJ30_19140) | 40350..40469 | + | 120 | Protein_46 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|