MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 19203 bp
Accession: NZ_CP090316 Location: 2519463..2538665 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Accession: NZ_CP090316 Location: 2519463..2538665 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD23_RS11495 (IUD23_11495) | 2514911..2515147 | - | 237 | WP_004087333.1 | SlyX family protein | - |
| IUD23_RS11500 (IUD23_11500) | 2515140..2516492 | - | 1353 | WP_038229566.1 | UDP-glucose/GDP-mannose dehydrogenase family protein | - |
| IUD23_RS11505 (IUD23_11505) | 2516518..2517474 | - | 957 | WP_038229564.1 | FKBP-type peptidyl-prolyl cis-trans isomerase | - |
| IUD23_RS11510 (IUD23_11510) | 2518134..2518718 | - | 585 | WP_080679690.1 | glutathione peroxidase | - |
| IUD23_RS11515 (IUD23_11515) | 2519463..2520338 | + | 876 | WP_038229562.1 | ABC transporter ATP-binding protein | - |
| IUD23_RS11520 (IUD23_11520) | 2520335..2521312 | + | 978 | WP_038229560.1 | ABC transporter permease | - |
| IUD23_RS11525 (IUD23_11525) | 2521571..2522017 | + | 447 | WP_020852919.1 | hypothetical protein | - |
| IUD23_RS11530 (IUD23_11530) | 2522197..2523369 | - | 1173 | WP_040123183.1 | tail fiber protein | - |
| IUD23_RS11535 (IUD23_11535) | 2523373..2523933 | - | 561 | WP_038230308.1 | DUF2612 domain-containing protein | - |
| IUD23_RS11540 (IUD23_11540) | 2523930..2525075 | - | 1146 | WP_038230314.1 | baseplate J/gp47 family protein | - |
| IUD23_RS11545 (IUD23_11545) | 2525225..2525533 | - | 309 | WP_004089386.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUD23_RS11550 (IUD23_11550) | 2525542..2525781 | - | 240 | WP_011097871.1 | antitoxin | - |
| IUD23_RS11555 (IUD23_11555) | 2525919..2526272 | - | 354 | WP_040123185.1 | hypothetical protein | - |
| IUD23_RS11560 (IUD23_11560) | 2526269..2526910 | - | 642 | WP_012382583.1 | Gp138 family membrane-puncturing spike protein | - |
| IUD23_RS11565 (IUD23_11565) | 2526907..2527737 | - | 831 | WP_038230303.1 | hypothetical protein | - |
| IUD23_RS11570 (IUD23_11570) | 2527734..2528051 | - | 318 | WP_012382585.1 | hypothetical protein | - |
| IUD23_RS11575 (IUD23_11575) | 2528051..2528500 | - | 450 | WP_234056344.1 | hypothetical protein | - |
| IUD23_RS11580 (IUD23_11580) | 2528516..2528821 | - | 306 | WP_230577600.1 | hypothetical protein | - |
| IUD23_RS11585 (IUD23_11585) | 2528966..2529253 | + | 288 | WP_230577702.1 | antitoxin | Antitoxin Detail |
| IUD23_RS11590 (IUD23_11590) | 2529250..2529654 | + | 405 | WP_038230656.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IUD23_RS11595 (IUD23_11595) | 2529673..2530392 | - | 720 | WP_230577703.1 | hypothetical protein | - |
| IUD23_RS11600 (IUD23_11600) | 2530389..2531375 | - | 987 | WP_234056345.1 | phage tail tape measure protein | - |
| IUD23_RS11605 (IUD23_11605) | 2531434..2531598 | - | 165 | WP_196242993.1 | hypothetical protein | - |
| IUD23_RS11610 (IUD23_11610) | 2531625..2532047 | - | 423 | WP_234056346.1 | putative phage tail assembly chaperone | - |
| IUD23_RS11615 (IUD23_11615) | 2532044..2532481 | - | 438 | WP_234056347.1 | DUF3277 family protein | - |
| IUD23_RS11620 (IUD23_11620) | 2532491..2532724 | - | 234 | WP_038230061.1 | DUF3383 family protein | - |
| IUD23_RS11625 (IUD23_11625) | 2532741..2532974 | - | 234 | WP_230577706.1 | transposase | - |
| IUD23_RS11630 (IUD23_11630) | 2532878..2533621 | - | 744 | WP_230577707.1 | IS607 family transposase ISCARN56 | Transposase |
| IUD23_RS11635 (IUD23_11635) | 2533786..2533947 | - | 162 | WP_014607806.1 | IS607 family transposase ISCARN56 | Transposase |
| IUD23_RS11640 (IUD23_11640) | 2533941..2534514 | - | 574 | Protein_2283 | IS607 family transposase ISCfe1 | Transposase |
| IUD23_RS11645 (IUD23_11645) | 2534540..2535157 | + | 618 | WP_234056348.1 | hypothetical protein | - |
| IUD23_RS11650 (IUD23_11650) | 2535154..2535432 | + | 279 | WP_004085028.1 | VRR-NUC domain-containing protein | - |
| IUD23_RS11655 (IUD23_11655) | 2535434..2535742 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| IUD23_RS11660 (IUD23_11660) | 2535827..2537245 | + | 1419 | WP_234056349.1 | DEAD/DEAH box helicase | - |
| IUD23_RS11665 (IUD23_11665) | 2537242..2537406 | + | 165 | WP_016024070.1 | hypothetical protein | - |
| IUD23_RS11670 (IUD23_11670) | 2537399..2537656 | + | 258 | WP_016024069.1 | DUF4224 domain-containing protein | - |
| IUD23_RS11675 (IUD23_11675) | 2537646..2538665 | + | 1020 | WP_038230604.1 | hypothetical protein ; Integrase | Integrase |
| IUD23_RS11680 (IUD23_11680) | 2538732..2540669 | - | 1938 | WP_038230066.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| IUD23_RS11685 (IUD23_11685) | 2540831..2543212 | + | 2382 | WP_234056350.1 | TonB-dependent receptor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|