MGE detailed information
MGE type: Prophage MGE length: 23032 bp
Accession: NZ_CP090316 Location: 1589994..1613025 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Accession: NZ_CP090316 Location: 1589994..1613025 Organism: Xylella fastidiosa subsp. morus strain Riv16 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD23_RS07100 (IUD23_07100) | 1585366..1587156 | + | 1791 | WP_040123071.1 | succinate dehydrogenase flavoprotein subunit | - |
| IUD23_RS07105 (IUD23_07105) | 1587177..1587962 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| IUD23_RS07110 (IUD23_07110) | 1588083..1588331 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| IUD23_RS07115 (IUD23_07115) | 1588363..1588734 | + | 372 | WP_234056268.1 | hypothetical protein | - |
| IUD23_RS07120 (IUD23_07120) | 1588760..1590001 | + | 1242 | WP_038230151.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| IUD23_RS07125 (IUD23_07125) | 1589994..1590716 | + | 723 | WP_038230153.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| IUD23_RS07130 (IUD23_07130) | 1591064..1593541 | + | 2478 | WP_234056436.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| IUD23_RS07135 (IUD23_07135) | 1593526..1594188 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| IUD23_RS07140 (IUD23_07140) | 1594193..1594630 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| IUD23_RS07145 (IUD23_07145) | 1594648..1596396 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| IUD23_RS07150 (IUD23_07150) | 1596393..1597412 | + | 1020 | WP_038230156.1 | Tetraacyldisaccharide 4'-kinase | VF |
| IUD23_RS07155 (IUD23_07155) | 1597828..1598505 | - | 678 | WP_234056269.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| IUD23_RS07160 (IUD23_07160) | 1598435..1599406 | - | 972 | WP_234056270.1 | phage tail protein | - |
| IUD23_RS07165 (IUD23_07165) | 1599414..1599971 | - | 558 | WP_027700436.1 | phage tail protein I | - |
| IUD23_RS07170 (IUD23_07170) | 1599964..1600857 | - | 894 | WP_038230566.1 | baseplate J/gp47 family protein | - |
| IUD23_RS07175 (IUD23_07175) | 1600857..1601180 | - | 324 | WP_228304176.1 | GPW/gp25 family protein | - |
| IUD23_RS07180 (IUD23_07180) | 1601344..1601607 | + | 264 | WP_004086967.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| IUD23_RS07185 (IUD23_07185) | 1601594..1601875 | + | 282 | WP_038230161.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| IUD23_RS07190 (IUD23_07190) | 1601912..1602499 | - | 588 | WP_038230163.1 | phage baseplate assembly protein V | - |
| IUD23_RS07195 (IUD23_07195) | 1602496..1603038 | - | 543 | WP_038230164.1 | hypothetical protein | - |
| IUD23_RS07200 (IUD23_07200) | 1603014..1603535 | - | 522 | WP_038230165.1 | hypothetical protein | - |
| IUD23_RS07205 (IUD23_07205) | 1603532..1603855 | - | 324 | WP_027700441.1 | hypothetical protein | - |
| IUD23_RS07210 (IUD23_07210) | 1603855..1604115 | - | 261 | WP_027700442.1 | hypothetical protein | - |
| IUD23_RS07215 (IUD23_07215) | 1604133..1606006 | - | 1874 | Protein_1403 | phage major capsid protein | - |
| IUD23_RS07220 (IUD23_07220) | 1606003..1606635 | - | 633 | WP_040123076.1 | phage portal protein | - |
| IUD23_RS07225 (IUD23_07225) | 1606641..1607150 | + | 510 | WP_234056271.1 | hypothetical protein | - |
| IUD23_RS12240 | 1607295..1607423 | + | 129 | WP_267959500.1 | hypothetical protein | - |
| IUD23_RS07230 (IUD23_07230) | 1607425..1607787 | - | 363 | WP_234056272.1 | DUF1640 domain-containing protein | - |
| IUD23_RS07235 (IUD23_07235) | 1607872..1609290 | + | 1419 | WP_234056273.1 | DEAD/DEAH box helicase | - |
| IUD23_RS07240 (IUD23_07240) | 1609287..1609541 | + | 255 | WP_234056274.1 | DUF4224 domain-containing protein | - |
| IUD23_RS07245 (IUD23_07245) | 1609531..1610549 | + | 1019 | Protein_1410 | tyrosine-type recombinase/integrase | - |
| IUD23_RS07250 (IUD23_07250) | 1611303..1611944 | + | 642 | WP_038228792.1 | Chromosome-partitioning ATPase Soj | VF |
| IUD23_RS07255 (IUD23_07255) | 1611972..1612448 | + | 477 | WP_038228794.1 | histidine phosphatase family protein | - |
| IUD23_RS07260 (IUD23_07260) | 1612453..1613025 | + | 573 | WP_038228796.1 | YceI family protein | - |
| IUD23_RS07265 (IUD23_07265) | 1613022..1614980 | + | 1959 | WP_038228798.1 | phospholipase D family protein | - |
| IUD23_RS07270 (IUD23_07270) | 1615911..1616300 | - | 390 | WP_004089975.1 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|