MGE detailed information
MGE type: Prophage MGE length: 57105 bp
Accession: NZ_CP090311 Location: 2389036..2446140 Organism: Pseudomonas kielensis strain 5BT Replicon: chromosome
Accession: NZ_CP090311 Location: 2389036..2446140 Organism: Pseudomonas kielensis strain 5BT Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LZV00_RS11065 (LZV00_11035) | 2384151..2386352 | + | 2202 | WP_265537990.1 | hypothetical protein | - |
| LZV00_RS11070 (LZV00_11040) | 2386339..2388435 | + | 2097 | WP_265537991.1 | hypothetical protein | - |
| LZV00_RS11075 (LZV00_11045) | 2388432..2389061 | + | 630 | WP_265537992.1 | hypothetical protein | - |
| LZV00_RS11080 (LZV00_11050) | 2389036..2390481 | + | 1446 | WP_265537993.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| LZV00_RS11085 (LZV00_11055) | 2391095..2391401 | - | 307 | Protein_2178 | diguanylate cyclase | - |
| LZV00_RS11090 (LZV00_11060) | 2391456..2391716 | - | 261 | WP_110175590.1 | DUF6429 family protein | - |
| LZV00_RS11095 (LZV00_11065) | 2391783..2392028 | - | 246 | Protein_2180 | transposase domain-containing protein | - |
| LZV00_RS11100 (LZV00_11070) | 2392601..2393926 | + | 1326 | WP_265537994.1 | group II intron reverse transcriptase/maturase | - |
| LZV00_RS11105 (LZV00_11075) | 2393981..2395255 | - | 1275 | Protein_2182 | IS66 family transposase ISPpu13 | Transposase |
| LZV00_RS11110 (LZV00_11080) | 2395358..2396365 | - | 1008 | WP_265537995.1 | group II intron maturase-specific domain-containing protein | - |
| LZV00_RS11115 (LZV00_11085) | 2396265..2398064 | - | 1800 | WP_265537996.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LZV00_RS11120 (LZV00_11090) | 2398386..2399116 | - | 731 | Protein_2185 | reverse transcriptase N-terminal domain-containing protein | - |
| LZV00_RS11125 (LZV00_11095) | 2399869..2400228 | - | 360 | WP_019412232.1 | IS66 family transposase ISPpu13 | Transposase |
| LZV00_RS11130 (LZV00_11100) | 2400461..2402016 | + | 1556 | WP_265536865.1 | IS3 family transposase IS1240 | Transposase |
| LZV00_RS11135 (LZV00_11105) | 2402280..2402534 | + | 255 | Protein_2188 | IS5 family transposase ISPst8 | Transposase |
| LZV00_RS11140 (LZV00_11110) | 2402481..2404859 | - | 2379 | WP_265537997.1 | Toxin Afp18 | VF |
| LZV00_RS11145 (LZV00_11115) | 2404862..2405881 | - | 1020 | WP_265537998.1 | hypothetical protein | - |
| LZV00_RS11150 (LZV00_11120) | 2405881..2407542 | - | 1662 | WP_265537999.1 | hypothetical protein | - |
| LZV00_RS11155 (LZV00_11125) | 2407539..2408003 | - | 465 | WP_265538000.1 | hypothetical protein | - |
| LZV00_RS11160 (LZV00_11130) | 2407996..2408982 | - | 987 | WP_265538001.1 | hypothetical protein | - |
| LZV00_RS11165 (LZV00_11135) | 2409174..2410097 | - | 924 | WP_265538002.1 | hypothetical protein | - |
| LZV00_RS11170 (LZV00_11140) | 2410190..2410840 | - | 651 | WP_265538003.1 | Pvc16 family protein | - |
| LZV00_RS11175 (LZV00_11145) | 2410850..2412853 | - | 2004 | WP_265538004.1 | ATP-binding protein | - |
| LZV00_RS11180 (LZV00_11150) | 2413203..2413652 | + | 450 | WP_265538005.1 | phage tail protein | - |
| LZV00_RS11185 (LZV00_11155) | 2413686..2414723 | + | 1038 | WP_265538006.1 | phage tail sheath C-terminal domain-containing protein | - |
| LZV00_RS11190 (LZV00_11160) | 2414788..2416041 | + | 1254 | WP_265538007.1 | hypothetical protein | - |
| LZV00_RS11195 (LZV00_11165) | 2415993..2416487 | + | 495 | WP_265538008.1 | phage tail sheath C-terminal domain-containing protein | - |
| LZV00_RS11200 (LZV00_11170) | 2416571..2417785 | + | 1215 | WP_265538009.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| LZV00_RS11205 (LZV00_11175) | 2417782..2418252 | + | 471 | WP_265538010.1 | phage tail protein | - |
| LZV00_RS11210 (LZV00_11180) | 2418249..2418428 | + | 180 | WP_265538011.1 | DUF5908 family protein | - |
| LZV00_RS11215 (LZV00_11185) | 2418425..2419144 | + | 720 | WP_265538012.1 | hypothetical protein | - |
| LZV00_RS11220 (LZV00_11190) | 2419141..2420775 | + | 1635 | WP_265538013.1 | phage baseplate assembly protein V | - |
| LZV00_RS11225 (LZV00_11195) | 2420898..2421326 | + | 429 | WP_265538014.1 | GPW/gp25 family protein | - |
| LZV00_RS11230 (LZV00_11200) | 2421323..2421745 | + | 423 | WP_265538015.1 | hypothetical protein | - |
| LZV00_RS11235 (LZV00_11205) | 2421787..2425863 | + | 4077 | WP_265538016.1 | hypothetical protein | - |
| LZV00_RS11240 (LZV00_11210) | 2425924..2428743 | + | 2820 | WP_265538017.1 | hypothetical protein | - |
| LZV00_RS11245 (LZV00_11215) | 2428923..2429285 | + | 363 | WP_265538018.1 | hypothetical protein | - |
| LZV00_RS11250 (LZV00_11220) | 2429743..2430762 | - | 1020 | WP_265538019.1 | Group II intron-encoded protein LtrA | VF |
| LZV00_RS11255 (LZV00_11225) | 2430952..2431227 | - | 276 | WP_265538020.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LZV00_RS11260 (LZV00_11230) | 2431227..2431499 | - | 273 | WP_265538021.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| LZV00_RS11265 (LZV00_11235) | 2431521..2431748 | - | 228 | WP_265538022.1 | DUF2807 domain-containing protein | - |
| LZV00_RS11270 (LZV00_11240) | 2431729..2432118 | - | 390 | WP_265538023.1 | hypothetical protein | - |
| LZV00_RS11275 (LZV00_11245) | 2432669..2433061 | - | 393 | Protein_2216 | transposase | - |
| LZV00_RS11280 (LZV00_11250) | 2433378..2433827 | + | 450 | WP_265538024.1 | lysozyme | - |
| LZV00_RS11285 (LZV00_11255) | 2433911..2435602 | + | 1692 | WP_265538025.1 | phage tail sheath C-terminal domain-containing protein | - |
| LZV00_RS11290 (LZV00_11260) | 2435696..2436459 | - | 764 | Protein_2219 | IS30 family transposase ISPsp7 | Transposase |
| LZV00_RS11295 (LZV00_11265) | 2436538..2438093 | + | 1556 | WP_265538026.1 | IS3 family transposase IS1240 | Transposase |
| LZV00_RS11300 (LZV00_11270) | 2438927..2439571 | + | 645 | WP_265538027.1 | helix-turn-helix domain-containing protein | - |
| LZV00_RS11305 (LZV00_11275) | 2439698..2441098 | - | 1401 | WP_265538028.1 | DEAD/DEAH box helicase family protein | - |
| LZV00_RS11310 (LZV00_11280) | 2441095..2441685 | - | 591 | WP_265538029.1 | hypothetical protein | - |
| LZV00_RS11315 (LZV00_11285) | 2441790..2442008 | + | 219 | WP_265538030.1 | helix-turn-helix transcriptional regulator | - |
| LZV00_RS11320 (LZV00_11290) | 2442130..2443489 | + | 1360 | Protein_2225 | IS1182 family transposase ISCfr1 | Transposase |
| LZV00_RS11325 (LZV00_11295) | 2443840..2444184 | + | 345 | WP_265538316.1 | YggL family protein | - |
| LZV00_RS11330 (LZV00_11300) | 2444722..2445882 | - | 1161 | Protein_2227 | IS3 family transposase | - |
| LZV00_RS11335 (LZV00_11305) | 2446440..2447900 | + | 1461 | WP_166590087.1 | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | - |
| LZV00_RS11340 (LZV00_11310) | 2448085..2450355 | - | 2271 | WP_166590086.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| LZV00_RS11345 (LZV00_11315) | 2450902..2451117 | + | 216 | WP_003223300.1 | ribosome modulation factor | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|