MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_CP090305 Location: 520938..530289 Organism: Escherichia coli strain Z503 Replicon: chromosome
Accession: NZ_CP090305 Location: 520938..530289 Organism: Escherichia coli strain Z503 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXF06_RS02495 (516099) | 516099..517400 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| LXF06_RS02500 (517516) | 517516..517854 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| LXF06_RS02505 (517830) | 517830..519527 | + | 1698 | WP_000068902.1 | protein-disulfide reductase DsbD | - |
| LXF06_RS02510 (519564) | 519564..520139 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| LXF06_RS02520 (520938) | 520938..522476 | + | 1539 | WP_001751945.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| LXF06_RS02525 (522842) | 522842..524176 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| LXF06_RS02530 (524256) | 524256..526403 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| LXF06_RS02535 (526462) | 526462..527919 | + | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| LXF06_RS02540 (528156) | 528156..529673 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| LXF06_RS02545 (529792) | 529792..529965 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| LXF06_RS02550 (529993) | 529993..530289 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| LXF06_RS02555 (530516) | 530516..530788 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| LXF06_RS02560 (530800) | 530800..531030 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| LXF06_RS02565 (531211) | 531211..532842 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| LXF06_RS02570 (532839) | 532839..533558 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.004 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.004 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.004 |