MGE detailed information
MGE type: IS/Tn MGE length: 459 bp
Accession: NZ_CP090304 Location: 3194324..3194782 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Replicon: chromosome
Accession: NZ_CP090304 Location: 3194324..3194782 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain ZJUJY Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC12_RS15605 (3191126) | 3191126..3191710 | - | 585 | WP_001244638.1 | fimbrial protein | - |
| LPC12_RS15610 (3192429) | 3192429..3193061 | - | 633 | WP_000835265.1 | YfdX family protein | - |
| LPC12_RS15615 (3193108) | 3193108..3193644 | - | 537 | WP_001038506.1 | STM3031 family outer membrane protein | - |
| LPC12_RS15620 (3194324) | 3194324..3194782 | - | 459 | WP_000502119.1 | IS200-IS605 family transposase IS200F | Transposase |
| LPC12_RS15625 (3195162) | 3195162..3195560 | - | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LPC12_RS15630 (3195560) | 3195560..3195787 | - | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| LPC12_RS15635 (3195964) | 3195964..3196215 | + | 252 | WP_001540858.1 | hypothetical protein | - |
| LPC12_RS15640 (3196490) | 3196490..3197296 | + | 807 | WP_010989071.1 | DUF1460 domain-containing protein | - |
| LPC12_RS15650 (3197581) | 3197581..3198339 | - | 759 | WP_000244329.1 | amidase activator ActS | - |
| LPC12_RS15655 (3198604) | 3198604..3199149 | + | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 | IS/Tn | TA439 | NC_003197 | 3194324..3194782 | 0 |