MGE detailed information
MGE type: Mobilizable plasmid MGE length: 103545 bp
Accession: NZ_CP090213 Location: 1..103545 Organism: Escherichia coli strain BY68 Replicon: plasmid pBY68-1
Accession: NZ_CP090213 Location: 1..103545 Organism: Escherichia coli strain BY68 Replicon: plasmid pBY68-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LVJ26_RS23290 (LVJ26_23195) | 1..1011 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| LVJ26_RS23295 (LVJ26_23200) | 1527..2231 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23300 (LVJ26_23205) | 2379..4652 | + | 2274 | WP_032319017.1 | thiosulfate reductase PhsA | - |
| LVJ26_RS23305 (LVJ26_23210) | 4667..5245 | + | 579 | WP_016153548.1 | thiosulfate reductase electron transport protein PhsB | - |
| LVJ26_RS23310 (LVJ26_23215) | 5242..6009 | + | 768 | WP_032319018.1 | thiosulfate reductase cytochrome B subunit | - |
| LVJ26_RS23315 (LVJ26_23220) | 6148..6351 | + | 204 | Protein_5 | serine-type D-Ala-D-Ala carboxypeptidase | - |
| LVJ26_RS23320 (LVJ26_23225) | 6416..7120 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23325 (LVJ26_23230) | 7172..7372 | - | 201 | Protein_7 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| LVJ26_RS23330 (LVJ26_23235) | 7612..8298 | + | 687 | Protein_8 | EcoRII N-terminal effector-binding domain-containing protein | - |
| LVJ26_RS23335 (LVJ26_23240) | 8352..9056 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LVJ26_RS23340 (LVJ26_23245) | 9129..9353 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| LVJ26_RS23345 (LVJ26_23250) | 9564..11056 | + | 1493 | Protein_11 | IS91-like element ISVsa3 family transposase | - |
| LVJ26_RS23350 (LVJ26_23255) | 11087..11969 | + | 883 | Protein_12 | DUF3363 domain-containing protein | - |
| LVJ26_RS23355 (LVJ26_23260) | 12186..13400 | + | 1215 | WP_058100717.1 | Bicyclomycin resistance protein | ARG |
| LVJ26_RS23360 (LVJ26_23265) | 13428..13733 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| LVJ26_RS23365 (LVJ26_23270) | 13845..14006 | + | 162 | Protein_15 | IS91 family transposase | - |
| LVJ26_RS23370 (LVJ26_23275) | 14162..14866 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LVJ26_RS23375 (LVJ26_23280) | 14931..15464 | + | 534 | Protein_17 | type II site-specific deoxyribonuclease | - |
| LVJ26_RS23380 (LVJ26_23285) | 15498..16931 | - | 1434 | WP_001288433.1 | DNA cytosine methyltransferase | - |
| LVJ26_RS23385 (LVJ26_23290) | 17025..17297 | + | 273 | Protein_19 | IS1 family transposase | - |
| LVJ26_RS23390 (LVJ26_23295) | 17379..18085 | + | 707 | Protein_20 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23395 (LVJ26_23300) | 18139..18360 | + | 222 | Protein_21 | peptidoglycan DD-metalloendopeptidase family protein | - |
| LVJ26_RS23400 (LVJ26_23305) | 18394..18591 | - | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| LVJ26_RS23405 | 18632..21110 | - | 2479 | Protein_23 | Ag(+)-translocating P-type ATPase SilP | - |
| LVJ26_RS23410 (LVJ26_23330) | 21208..21648 | - | 441 | WP_000758229.1 | DUF411 domain-containing protein | - |
| LVJ26_RS23415 (LVJ26_23335) | 21735..24875 | - | 3141 | Protein_25 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| LVJ26_RS23420 (LVJ26_23340) | 24886..26177 | - | 1292 | Protein_26 | efflux RND transporter periplasmic adaptor subunit | - |
| LVJ26_RS23425 (LVJ26_23345) | 26290..26643 | - | 354 | WP_001246155.1 | cation efflux system protein CusF | - |
| LVJ26_RS23430 (LVJ26_23350) | 26671..28056 | - | 1386 | WP_164538592.1 | Cation efflux system protein CusC | VF |
| LVJ26_RS23435 (LVJ26_23355) | 28246..28926 | + | 681 | WP_000697969.1 | Transcriptional regulatory protein CusR | VF |
| LVJ26_RS23440 (LVJ26_23360) | 28919..30394 | + | 1476 | WP_000555737.1 | copper/silver sensor histidine kinase SilS | - |
| LVJ26_RS23445 (LVJ26_23365) | 30645..31076 | + | 432 | WP_000790483.1 | silver-binding protein SilE | - |
| LVJ26_RS23450 (LVJ26_23370) | 31220..31528 | + | 309 | WP_025670887.1 | DUF305 domain-containing protein | - |
| LVJ26_RS23455 (LVJ26_23375) | 31522..31740 | - | 219 | Protein_33 | IS1 family transposase | - |
| LVJ26_RS23460 (LVJ26_23380) | 31813..32517 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LVJ26_RS23465 (LVJ26_23385) | 32523..33251 | + | 729 | WP_152921961.1 | replication initiation protein | - |
| LVJ26_RS23470 (LVJ26_23390) | 34141..35577 | - | 1437 | WP_000105383.1 | glutathione synthase | - |
| LVJ26_RS23475 (LVJ26_23395) | 35844..36548 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LVJ26_RS23480 (LVJ26_23400) | 36742..37128 | + | 387 | WP_063102497.1 | bleomycin binding protein | - |
| LVJ26_RS23485 (LVJ26_23405) | 37448..37840 | - | 393 | WP_000084745.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LVJ26_RS23490 (LVJ26_23410) | 38175..38879 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LVJ26_RS23495 (LVJ26_23415) | 38940..39083 | - | 144 | Protein_41 | EAL domain-containing protein | - |
| LVJ26_RS23500 (LVJ26_23420) | 39286..40299 | - | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LVJ26_RS23505 (LVJ26_23425) | 40457..40930 | + | 474 | WP_001389366.1 | trimethoprim-resistant dihydrofolate reductase DfrA17 | - |
| LVJ26_RS23510 (LVJ26_23430) | 41071..41778 | + | 708 | WP_232579878.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23515 (LVJ26_23435) | 41832..42347 | - | 516 | Protein_45 | IS4 family transposase IS10R | Transposase |
| LVJ26_RS23520 (LVJ26_23440) | 42490..43350 | + | 861 | WP_000557454.1 | SPBc2 prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| LVJ26_RS23525 (LVJ26_23445) | 43363..43905 | + | 543 | WP_000587837.1 | AAA family ATPase | - |
| LVJ26_RS23530 (LVJ26_23450) | 44387..44578 | - | 192 | WP_000951934.1 | hypothetical protein | - |
| LVJ26_RS23535 (LVJ26_23455) | 44602..44829 | + | 228 | WP_000248278.1 | hypothetical protein | - |
| LVJ26_RS23540 (LVJ26_23460) | 44880..45980 | + | 1101 | WP_232579879.1 | DUF3883 domain-containing protein | - |
| LVJ26_RS23545 (LVJ26_23465) | 45996..46601 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| LVJ26_RS23550 (LVJ26_23470) | 46696..49593 | + | 2898 | WP_097753550.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| LVJ26_RS23555 (LVJ26_23475) | 49628..51490 | + | 1863 | Protein_53 | Tn3 family transposase ISEc63 | Transposase |
| LVJ26_RS23560 (LVJ26_23480) | 51556..52260 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23565 (LVJ26_23485) | 52313..52603 | + | 291 | Protein_55 | Tn3 family transposase ISEc63 | Transposase |
| LVJ26_RS23570 (LVJ26_23490) | 52619..54715 | + | 2097 | WP_000422420.1 | hypothetical protein | - |
| LVJ26_RS23575 (LVJ26_23495) | 54827..56746 | - | 1920 | WP_000691727.1 | Tetracycline resistance protein TetM from transposon TnFO1 | VF |
| LVJ26_RS23580 (LVJ26_23500) | 56762..56878 | - | 117 | WP_001791010.1 | tetracycline resistance determinant leader peptide | - |
| LVJ26_RS23585 (LVJ26_23505) | 57123..57446 | - | 324 | Protein_59 | conjugal transfer protein | - |
| LVJ26_RS23590 (LVJ26_23510) | 57623..58324 | - | 702 | WP_232579880.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23595 (LVJ26_23515) | 58387..58488 | - | 102 | Protein_61 | integrase | - |
| LVJ26_RS23600 (LVJ26_23520) | 58694..59560 | + | 867 | WP_001931474.1 | Beta-lactamase PSE-1 | ARG |
| LVJ26_RS23605 (LVJ26_23525) | 59678..60516 | + | 839 | Protein_63 | Streptomycin 3''-adenylyltransferase | ARG |
| LVJ26_RS23610 (LVJ26_23530) | 60731..61990 | + | 1260 | WP_000095725.1 | Bicyclomycin resistance protein | ARG |
| LVJ26_RS23615 (LVJ26_23535) | 62083..62921 | + | 839 | Protein_65 | Streptomycin 3''-adenylyltransferase | ARG |
| LVJ26_RS23620 (LVJ26_23540) | 63044..63376 | + | 333 | WP_112918777.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| LVJ26_RS23625 (LVJ26_23545) | 63623..64255 | - | 633 | WP_020802982.1 | IS256 family transposase IS406 | Transposase |
| LVJ26_RS23630 (LVJ26_23550) | 64278..64553 | + | 276 | WP_109023896.1 | hypothetical protein | - |
| LVJ26_RS23635 (LVJ26_23555) | 64556..65347 | - | 792 | WP_000034420.1 | Dihydropteroate synthase | ARG |
| LVJ26_RS23640 (LVJ26_23560) | 65816..66061 | - | 246 | WP_001354008.1 | GrpB family protein | - |
| LVJ26_RS23645 (LVJ26_23565) | 66099..66962 | - | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| LVJ26_RS23650 (LVJ26_23570) | 67108..67365 | - | 258 | Protein_72 | hypothetical protein | - |
| LVJ26_RS23655 (LVJ26_23575) | 67420..68124 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23660 (LVJ26_23580) | 68275..69090 | + | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LVJ26_RS23665 (LVJ26_23585) | 69280..69984 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23670 (LVJ26_23590) | 70049..71299 | - | 1251 | Protein_76 | transposase | - |
| LVJ26_RS23675 (LVJ26_23595) | 71374..72042 | - | 669 | WP_001300294.1 | putative signaling protein | VF |
| LVJ26_RS23680 (LVJ26_23600) | 72078..72314 | - | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| LVJ26_RS23685 (LVJ26_23605) | 72311..72673 | - | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| LVJ26_RS23690 (LVJ26_23610) | 72691..74385 | - | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| LVJ26_RS23695 (LVJ26_23615) | 74437..74859 | - | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| LVJ26_RS23700 (LVJ26_23620) | 74895..75170 | - | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| LVJ26_RS23705 (LVJ26_23625) | 75184..75534 | - | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| LVJ26_RS23710 (LVJ26_23630) | 75606..76040 | + | 435 | WP_000429836.1 | Hg(II)-responsive transcriptional regulator | - |
| LVJ26_RS23715 (LVJ26_23635) | 76590..77558 | + | 969 | WP_020956880.1 | IS5 family transposase IS903B | Transposase |
| LVJ26_RS23720 (LVJ26_23640) | 77698..78084 | - | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| LVJ26_RS23725 (LVJ26_23645) | 78665..79633 | + | 969 | WP_232579881.1 | IS5 family transposase IS903B | Transposase |
| LVJ26_RS23730 (LVJ26_23650) | 79683..80573 | + | 891 | Protein_88 | IS30 family transposase IS30D | Transposase |
| LVJ26_RS23735 (LVJ26_23655) | 80596..81624 | - | 1029 | WP_063097364.1 | tyrosine-type recombinase/integrase | - |
| LVJ26_RS23740 (LVJ26_23660) | 82018..82493 | + | 476 | Protein_90 | IS1 family transposase | - |
| LVJ26_RS23745 (LVJ26_23665) | 82770..82979 | - | 210 | Protein_91 | IS110 family transposase | - |
| LVJ26_RS23750 (LVJ26_23670) | 83033..83737 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| LVJ26_RS23755 (LVJ26_23675) | 83843..84334 | + | 492 | Protein_93 | IS5 family transposase ISKpn26 | Transposase |
| LVJ26_RS23760 (LVJ26_23680) | 84322..84576 | - | 255 | Protein_94 | hypothetical protein | - |
| LVJ26_RS23765 (LVJ26_23685) | 84533..84763 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| LVJ26_RS23770 (LVJ26_23690) | 84760..85176 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| LVJ26_RS23775 (LVJ26_23695) | 85381..86237 | + | 857 | Protein_97 | IS3 family transposase ISEc14 | Transposase |
| LVJ26_RS23780 (LVJ26_23700) | 86809..87210 | + | 402 | WP_096171525.1 | hypothetical protein | - |
| LVJ26_RS23785 (LVJ26_23705) | 87310..87867 | - | 558 | WP_001235700.1 | Tn3 family transposase ISEc63 | Transposase |
| LVJ26_RS23790 (LVJ26_23710) | 88031..88171 | + | 141 | WP_020219413.1 | hypothetical protein | - |
| LVJ26_RS23795 (LVJ26_23715) | 88183..88887 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| LVJ26_RS23800 (LVJ26_23720) | 88957..89157 | + | 201 | WP_000993264.1 | DUF3330 domain-containing protein | - |
| LVJ26_RS23805 (LVJ26_23725) | 89283..89843 | + | 561 | WP_000147567.1 | Tn3 family transposase TnpR_TnAs3 | Transposase |
| LVJ26_RS23810 (LVJ26_23730) | 89846..91189 | + | 1344 | WP_232579882.1 | DUF4158 domain-containing protein | - |
| LVJ26_RS23815 (LVJ26_23735) | 91561..92816 | + | 1256 | Protein_105 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| LVJ26_RS23820 (LVJ26_23740) | 93297..93605 | - | 309 | Protein_106 | replication initiation protein | - |
| LVJ26_RS23830 (LVJ26_23750) | 94464..95951 | - | 1488 | Protein_108 | group II intron reverse transcriptase/maturase | - |
| LVJ26_RS23835 (LVJ26_23755) | 96352..96777 | + | 426 | WP_001776124.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| LVJ26_RS23840 (LVJ26_23760) | 96777..98048 | + | 1272 | WP_001776125.1 | Y-family DNA polymerase | - |
| LVJ26_RS23845 (LVJ26_23765) | 98187..98342 | + | 156 | WP_001776126.1 | hypothetical protein | - |
| LVJ26_RS23850 (LVJ26_23770) | 98365..99573 | - | 1209 | WP_096171473.1 | IS200-IS605 family transposase IS609 | Transposase |
| LVJ26_RS23855 (LVJ26_23775) | 100668..101639 | - | 972 | WP_001698877.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| LVJ26_RS23860 (LVJ26_23780) | 101639..102805 | - | 1167 | WP_000523812.1 | Sporulation initiation inhibitor protein Soj | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|