MGE detailed information
MGE type: Genomic_island MGE length: 11452 bp
Accession: NZ_CP090196 Location: 627680..639131 Organism: Escherichia coli strain YL3 Replicon: chromosome
Accession: NZ_CP090196 Location: 627680..639131 Organism: Escherichia coli strain YL3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXN07_RS02960 (622681) | 622681..623115 | - | 435 | WP_000948824.1 | PTS galactosamine/N-acetylgalactosamine transporter subunit IIA | - |
| LXN07_RS02965 (623133) | 623133..624011 | - | 879 | WP_001298314.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| LXN07_RS02970 (624001) | 624001..624780 | - | 780 | WP_000406214.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| LXN07_RS02975 (624791) | 624791..625264 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| LXN07_RS02980 (625287) | 625287..626567 | - | 1281 | WP_001521382.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| LXN07_RS02985 (626816) | 626816..627625 | + | 810 | WP_000072171.1 | aga operon transcriptional regulator AgaR | - |
| LXN07_RS02990 (627680) | 627680..628144 | - | 465 | WP_000347272.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| LXN07_RS02995 (628144) | 628144..628479 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| LXN07_RS03000 (628628) | 628628..630199 | - | 1572 | WP_001273738.1 | galactarate dehydratase | - |
| LXN07_RS03005 (630574) | 630574..631908 | + | 1335 | WP_089502604.1 | galactarate/glucarate/glycerate transporter GarP | - |
| LXN07_RS03010 (631924) | 631924..632694 | + | 771 | WP_001058227.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| LXN07_RS03015 (632724) | 632724..633614 | + | 891 | WP_021523278.1 | 2-hydroxy-3-oxopropionate reductase | - |
| LXN07_RS03020 (633711) | 633711..634856 | + | 1146 | WP_001521378.1 | glycerate 2-kinase | - |
| LXN07_RS03030 (635656) | 635656..636843 | - | 1188 | WP_001521377.1 | YhaC family protein | - |
| LXN07_RS03035 (636865) | 636865..637404 | - | 540 | WP_000675749.1 | protein YhaB | - |
| LXN07_RS03040 (637660) | 637660..637878 | - | 219 | WP_171866797.1 | transcriptional activator TdcR | - |
| LXN07_RS03045 (638193) | 638193..639131 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| LXN07_RS03050 (639230) | 639230..640219 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| LXN07_RS03055 (640241) | 640241..641572 | + | 1332 | WP_000107721.1 | threonine/serine transporter TdcC | - |
| LXN07_RS03060 (641598) | 641598..642806 | + | 1209 | WP_001297162.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|