MGE detailed information
MGE type: Genomic_island MGE length: 10758 bp
Accession: NZ_CP090196 Location: 4012149..4022906 Organism: Escherichia coli strain YL3 Replicon: chromosome
Accession: NZ_CP090196 Location: 4012149..4022906 Organism: Escherichia coli strain YL3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXN07_RS19260 (4007495) | 4007495..4008277 | - | 783 | WP_001521911.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| LXN07_RS19265 (4008593) | 4008593..4011802 | + | 3210 | WP_001521910.1 | RNA-directed DNA polymerase | - |
| LXN07_RS19270 (4012149) | 4012149..4012619 | + | 471 | WP_000201185.1 | hypothetical protein | - |
| LXN07_RS19275 (4012616) | 4012616..4012718 | + | 103 | Protein_3776 | helix-turn-helix domain-containing protein | - |
| LXN07_RS19280 (4012810) | 4012810..4012968 | + | 159 | Protein_3777 | integrase | - |
| LXN07_RS19290 (4013173) | 4013173..4014426 | - | 1254 | WP_001521908.1 | glutamate-5-semialdehyde dehydrogenase | - |
| LXN07_RS19295 (4014438) | 4014438..4015541 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| LXN07_RS19300 (4015829) | 4015829..4016884 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| LXN07_RS19305 (4016923) | 4016923..4017324 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| - (4018042) | 4018042..4018122 | - | 81 | NuclAT_11 | - | - |
| - (4018042) | 4018042..4018122 | - | 81 | NuclAT_11 | - | - |
| - (4018042) | 4018042..4018122 | - | 81 | NuclAT_11 | - | - |
| - (4018042) | 4018042..4018122 | - | 81 | NuclAT_11 | - | - |
| LXN07_RS19310 (4017382) | 4017382..4018626 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| LXN07_RS19315 (4018718) | 4018718..4019176 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| LXN07_RS19320 (4019437) | 4019437..4020894 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| LXN07_RS19325 (4020951) | 4020951..4021303 | - | 353 | Protein_3785 | peptide chain release factor H | - |
| LXN07_RS19330 (4021299) | 4021299..4021505 | - | 207 | Protein_3786 | RtcB family protein | - |
| LXN07_RS19335 (4021750) | 4021750..4022202 | - | 453 | WP_023144376.1 | GNAT family N-acetyltransferase | - |
| LXN07_RS19340 (4022212) | 4022212..4022610 | - | 399 | WP_001521903.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| LXN07_RS19345 (4022613) | 4022613..4022906 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| LXN07_RS19350 (4022958) | 4022958..4024013 | - | 1056 | WP_001226177.1 | DNA polymerase IV | - |
| LXN07_RS19355 (4024084) | 4024084..4024869 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| LXN07_RS19360 (4024841) | 4024841..4026553 | + | 1713 | Protein_3792 | flagellar biosynthesis protein FlhA | - |
| LXN07_RS19365 (4026632) | 4026632..4026985 | + | 354 | WP_024166466.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| LXN07_RS19370 (4027042) | 4027042..4027791 | - | 750 | WP_016233951.1 | C40 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|