MGE detailed information
MGE type: Genomic_island MGE length: 17978 bp
Accession: NZ_CP090065 Location: 634441..652418 Organism: Pectobacterium polonicum strain BY21311 Replicon: chromosome
Accession: NZ_CP090065 Location: 634441..652418 Organism: Pectobacterium polonicum strain BY21311 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LW347_RS02830 (LW347_02830) | 631234..632559 | - | 1326 | WP_258883937.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| LW347_RS02835 (LW347_02835) | 632556..633359 | - | 804 | WP_258883938.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LW347_RS02840 (LW347_02840) | 633619..634058 | - | 440 | Protein_544 | IS1 family transposase | - |
| LW347_RS02845 (LW347_02845) | 634441..635274 | - | 834 | WP_258883939.1 | hypothetical protein | - |
| LW347_RS02850 (LW347_02850) | 635881..636132 | - | 252 | WP_258883940.1 | CcdB family protein | - |
| LW347_RS02860 (LW347_02860) | 637622..637756 | - | 135 | Protein_548 | XRE family transcriptional regulator | - |
| LW347_RS02865 (LW347_02865) | 637889..638458 | - | 570 | WP_258883942.1 | recombinase family protein | - |
| LW347_RS02870 (LW347_02870) | 638591..641335 | + | 2745 | WP_258883943.1 | N-6 DNA methylase | - |
| LW347_RS02875 (LW347_02875) | 641388..643337 | + | 1950 | WP_258883944.1 | helicase-related protein | - |
| LW347_RS02880 (LW347_02880) | 643339..644598 | + | 1260 | WP_258883945.1 | GIY-YIG nuclease family protein | - |
| LW347_RS02885 (LW347_02885) | 644723..645028 | - | 306 | WP_258883946.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| LW347_RS02890 (LW347_02890) | 645031..645249 | - | 219 | WP_258883947.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| LW347_RS02895 (LW347_02895) | 645338..645720 | - | 383 | Protein_555 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| LW347_RS02900 (LW347_02900) | 645719..646084 | - | 366 | Protein_556 | Arm DNA-binding domain-containing protein | - |
| LW347_RS02905 (LW347_02905) | 646585..647733 | + | 1149 | WP_258883948.1 | Fic family protein | - |
| LW347_RS02910 (LW347_02910) | 648138..648308 | + | 171 | Protein_558 | IS630 family transposase | - |
| LW347_RS02915 (LW347_02915) | 648452..650398 | - | 1947 | WP_258883949.1 | AIPR family protein | - |
| LW347_RS02920 (LW347_02920) | 650819..651085 | - | 267 | WP_258883950.1 | helix-turn-helix transcriptional regulator | - |
| LW347_RS02925 (LW347_02925) | 651189..651449 | - | 261 | WP_039477842.1 | helix-turn-helix transcriptional regulator | - |
| LW347_RS02930 (LW347_02930) | 651570..651791 | + | 222 | WP_033570620.1 | helix-turn-helix transcriptional regulator | - |
| LW347_RS02935 (LW347_02935) | 652698..653957 | - | 1260 | WP_258883951.1 | tyrosine-type recombinase/integrase | - |
| LW347_RS02945 (LW347_02945) | 654323..654898 | - | 576 | WP_010301517.1 | transcriptional regulator | - |
| LW347_RS02950 (LW347_02950) | 654941..656671 | - | 1731 | WP_258883952.1 | protein-disulfide reductase DsbD | - |
| LW347_RS02955 (LW347_02955) | 656647..656979 | - | 333 | WP_258883953.1 | divalent cation tolerance protein CutA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|