MGE detailed information
MGE type: Genomic_island MGE length: 45369 bp
Accession: NZ_CP089952 Location: 1192391..1237759 Organism: Xanthomonas campestris pv. campestris strain SB80 Replicon: chromosome
Accession: NZ_CP089952 Location: 1192391..1237759 Organism: Xanthomonas campestris pv. campestris strain SB80 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LR085_RS04980 (LR085_04980) | 1188146..1188931 | - | 786 | WP_218065343.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| LR085_RS04985 (LR085_04985) | 1189077..1189871 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| LR085_RS04990 (LR085_04990) | 1189920..1190120 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| LR085_RS04995 (LR085_04995) | 1190310..1192094 | + | 1785 | WP_043890239.1 | autotransporter domain-containing esterase | - |
| LR085_RS05005 (LR085_05005) | 1192358..1193935 | + | 1578 | WP_100666311.1 | hypothetical protein ; Integrase | Integrase |
| LR085_RS05010 (LR085_05010) | 1193995..1194423 | + | 429 | WP_145998822.1 | hypothetical protein | - |
| LR085_RS05015 (LR085_05015) | 1194808..1195596 | - | 789 | WP_145998823.1 | hypothetical protein | - |
| LR085_RS05020 (LR085_05020) | 1195670..1196563 | - | 894 | WP_145998824.1 | hypothetical protein | - |
| LR085_RS05025 (LR085_05025) | 1196729..1197109 | - | 381 | WP_172973787.1 | hypothetical protein | - |
| LR085_RS05030 (LR085_05030) | 1197106..1197420 | - | 315 | WP_234565080.1 | hypothetical protein | - |
| LR085_RS05035 (LR085_05035) | 1197469..1198230 | - | 762 | WP_100666316.1 | hypothetical protein | - |
| LR085_RS05040 (LR085_05040) | 1198408..1198707 | + | 300 | WP_230428394.1 | helix-turn-helix transcriptional regulator | - |
| LR085_RS05045 (LR085_05045) | 1198719..1199207 | + | 489 | WP_230431642.1 | ADP-dependent glucokinase/phosphofructokinase | - |
| LR085_RS05050 (LR085_05050) | 1199212..1199664 | - | 453 | WP_145998825.1 | hypothetical protein | - |
| LR085_RS05055 (LR085_05055) | 1199867..1201267 | - | 1401 | WP_218065345.1 | hypothetical protein ; Integrase | Integrase |
| LR085_RS05060 (LR085_05060) | 1201875..1202390 | - | 516 | WP_100666321.1 | hypothetical protein | - |
| LR085_RS05065 (LR085_05065) | 1202479..1202964 | + | 486 | WP_145998826.1 | hypothetical protein | - |
| LR085_RS05070 (LR085_05070) | 1203097..1204581 | - | 1485 | WP_100666322.1 | hypothetical protein | - |
| LR085_RS05075 (LR085_05075) | 1204661..1205626 | - | 966 | WP_145998827.1 | hypothetical protein | - |
| LR085_RS05080 (LR085_05080) | 1206016..1206276 | + | 261 | WP_145998828.1 | hypothetical protein | - |
| LR085_RS05085 (LR085_05085) | 1206263..1206760 | - | 498 | WP_152091502.1 | hypothetical protein | - |
| LR085_RS05090 (LR085_05090) | 1206870..1207400 | - | 531 | WP_152091503.1 | hypothetical protein | - |
| LR085_RS05095 (LR085_05095) | 1207435..1208247 | - | 813 | WP_152091504.1 | hypothetical protein | - |
| LR085_RS05100 (LR085_05100) | 1208244..1208552 | - | 309 | WP_152091505.1 | hypothetical protein | - |
| LR085_RS05105 (LR085_05105) | 1208763..1209242 | + | 480 | WP_152091506.1 | DNA repair protein RadC | - |
| LR085_RS05110 (LR085_05110) | 1209311..1209487 | + | 177 | WP_172973789.1 | hypothetical protein | - |
| LR085_RS05115 (LR085_05115) | 1209707..1210348 | + | 642 | WP_152091507.1 | DUF1629 domain-containing protein | - |
| LR085_RS05120 (LR085_05120) | 1210384..1212969 | + | 2586 | WP_218065346.1 | hypothetical protein | - |
| LR085_RS05125 (LR085_05125) | 1213209..1214012 | - | 804 | WP_230428395.1 | hypothetical protein | - |
| LR085_RS05130 (LR085_05130) | 1214295..1214780 | - | 486 | WP_152091557.1 | hypothetical protein | - |
| LR085_RS05135 (LR085_05135) | 1214878..1215198 | + | 321 | WP_234565082.1 | hypothetical protein | - |
| LR085_RS05140 (LR085_05140) | 1215231..1215512 | + | 282 | WP_234565084.1 | hypothetical protein | - |
| LR085_RS05145 (LR085_05145) | 1215630..1215788 | + | 159 | WP_172973790.1 | hypothetical protein | - |
| LR085_RS05155 (LR085_05155) | 1217856..1218332 | - | 477 | WP_152091510.1 | hypothetical protein | - |
| LR085_RS05160 (LR085_05160) | 1218492..1219250 | - | 759 | WP_234565086.1 | ATP-dependent endonuclease | - |
| LR085_RS05165 (LR085_05165) | 1219860..1219861 | - | 2 | WP_087942062.1 | IS5 family transposase IS1480a | Transposase |
| LR085_RS05170 (LR085_05170) | 1220106..1221317 | - | 1212 | WP_218065348.1 | AAA family ATPase | - |
| LR085_RS05175 (LR085_05175) | 1221853..1222152 | - | 300 | WP_100666201.1 | conjugal transfer protein TraD | - |
| LR085_RS05180 (LR085_05180) | 1222419..1224014 | + | 1596 | WP_100666199.1 | MobA/MobL family protein | - |
| LR085_RS05185 (LR085_05185) | 1224067..1224408 | - | 342 | WP_100666197.1 | hypothetical protein | - |
| LR085_RS05190 (LR085_05190) | 1225102..1225530 | + | 429 | WP_012437589.1 | hypothetical protein | - |
| LR085_RS05195 (LR085_05195) | 1225773..1226003 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| LR085_RS05200 (LR085_05200) | 1226067..1226213 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| LR085_RS05205 (LR085_05205) | 1226398..1226793 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| LR085_RS05210 (LR085_05210) | 1226884..1227276 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| LR085_RS05215 (LR085_05215) | 1227810..1229939 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| LR085_RS05220 (LR085_05220) | 1230433..1231308 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| LR085_RS05225 (LR085_05225) | 1231531..1232004 | + | 474 | WP_012437597.1 | hypothetical protein | - |
| LR085_RS05230 (LR085_05230) | 1232035..1232712 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| LR085_RS05235 (LR085_05235) | 1232705..1234039 | + | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| LR085_RS05240 (LR085_05240) | 1234182..1234673 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| LR085_RS05245 (LR085_05245) | 1234670..1234960 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| LR085_RS05250 (LR085_05250) | 1235035..1235436 | - | 402 | WP_019237348.1 | SymE family type I addiction module toxin | - |
| LR085_RS05255 (LR085_05255) | 1235968..1236591 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| LR085_RS05260 (LR085_05260) | 1236605..1237468 | - | 864 | WP_011038216.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| LR085_RS05265 (LR085_05265) | 1237475..1238731 | - | 1257 | WP_011038215.1 | type II secretion system F family protein | - |
| LR085_RS05270 (LR085_05270) | 1239058..1239498 | + | 441 | WP_011038214.1 | pilin | - |
| LR085_RS05275 (LR085_05275) | 1239578..1240012 | + | 435 | WP_011038213.1 | pilin | - |
| LR085_RS05280 (LR085_05280) | 1240077..1241809 | + | 1733 | Protein_1029 | type IV-A pilus assembly ATPase PilB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|